EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000011194 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 11099 bases
Position: chr20:60387201-60398299
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000012507	FDF	PF09532.10	2.6e-25	1	1
ENSPPYP00000012507	LSM14	PF12701.7	2.1e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000012999	LSM14B-201	1155	-	ENSPPYP00000012507	384 (aa)	-	H2P2H4

Gene Model

Click here to download ENSPPYG00000011194's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011194's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000011194	LSM14B	63	72.464	ENSPPYG00000009832	-	55	72.593

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011194	LSM14B	100	77.500	ENSG00000149657	LSM14B	100	98.643	Homo_sapiens
ENSPPYG00000011194	LSM14B	90	50.685	ENSAPOG00000001780	lsm14b	92	47.619	Acanthochromis_polyacanthus
ENSPPYG00000011194	LSM14B	99	76.832	ENSAMEG00000013430	LSM14B	100	75.414	Ailuropoda_melanoleuca
ENSPPYG00000011194	LSM14B	90	48.901	ENSACIG00000012266	lsm14b	91	49.858	Amphilophus_citrinellus
ENSPPYG00000011194	LSM14B	90	51.233	ENSAOCG00000012380	lsm14b	92	51.087	Amphiprion_ocellaris
ENSPPYG00000011194	LSM14B	98	41.667	ENSAOCG00000006667	LSM14B	90	44.722	Amphiprion_ocellaris
ENSPPYG00000011194	LSM14B	90	50.136	ENSATEG00000016603	lsm14b	92	48.118	Anabas_testudineus
ENSPPYG00000011194	LSM14B	91	70.483	ENSAPLG00000013203	LSM14B	100	69.466	Anas_platyrhynchos
ENSPPYG00000011194	LSM14B	89	48.056	ENSACLG00000019663	lsm14b	92	49.591	Astatotilapia_calliptera
ENSPPYG00000011194	LSM14B	99	52.439	ENSAMXG00000002865	lsm14b	99	56.219	Astyanax_mexicanus
ENSPPYG00000011194	LSM14B	100	77.647	ENSBTAG00000021558	LSM14B	100	78.118	Bos_taurus
ENSPPYG00000011194	LSM14B	100	83.059	ENSCJAG00000014434	LSM14B	100	83.059	Callithrix_jacchus
ENSPPYG00000011194	LSM14B	90	74.805	ENSCAFG00000012518	LSM14B	98	74.479	Canis_familiaris
ENSPPYG00000011194	LSM14B	100	82.836	ENSCAFG00020022150	LSM14B	100	82.836	Canis_lupus_dingo
ENSPPYG00000011194	LSM14B	99	60.156	ENSCHIG00000022681	-	100	60.263	Capra_hircus
ENSPPYG00000011194	LSM14B	100	77.882	ENSCHIG00000010284	-	100	79.717	Capra_hircus
ENSPPYG00000011194	LSM14B	89	72.829	ENSTSYG00000031914	LSM14B	98	82.464	Carlito_syrichta
ENSPPYG00000011194	LSM14B	89	72.905	ENSCAPG00000013059	LSM14B	100	76.945	Cavia_aperea
ENSPPYG00000011194	LSM14B	89	73.109	ENSCPOG00000038080	LSM14B	100	77.168	Cavia_porcellus
ENSPPYG00000011194	LSM14B	100	76.250	ENSCCAG00000021267	LSM14B	96	95.890	Cebus_capucinus
ENSPPYG00000011194	LSM14B	100	58.852	ENSCCAG00000024900	-	100	64.145	Cebus_capucinus
ENSPPYG00000011194	LSM14B	100	80.189	ENSCATG00000036006	LSM14B	100	79.009	Cercocebus_atys
ENSPPYG00000011194	LSM14B	89	71.709	ENSCLAG00000003186	LSM14B	100	76.301	Chinchilla_lanigera
ENSPPYG00000011194	LSM14B	100	80.425	ENSCSAG00000015729	LSM14B	100	79.245	Chlorocebus_sabaeus
ENSPPYG00000011194	LSM14B	68	82.129	ENSCHOG00000006997	-	100	82.129	Choloepus_hoffmanni
ENSPPYG00000011194	LSM14B	99	71.226	ENSCPBG00000027065	LSM14B	79	90.503	Chrysemys_picta_bellii
ENSPPYG00000011194	LSM14B	89	74.790	ENSCANG00000036986	LSM14B	100	100.000	Colobus_angolensis_palliatus
ENSPPYG00000011194	LSM14B	100	76.500	ENSCGRG00001018399	Lsm14b	100	76.750	Cricetulus_griseus_chok1gshd
ENSPPYG00000011194	LSM14B	67	71.477	ENSCGRG00000006111	-	100	73.490	Cricetulus_griseus_crigri
ENSPPYG00000011194	LSM14B	91	48.800	ENSCSEG00000004722	lsm14b	93	49.728	Cynoglossus_semilaevis
ENSPPYG00000011194	LSM14B	95	42.969	ENSCSEG00000020669	LSM14B	92	42.120	Cynoglossus_semilaevis
ENSPPYG00000011194	LSM14B	65	36.471	ENSCVAG00000012433	-	88	34.310	Cyprinodon_variegatus
ENSPPYG00000011194	LSM14B	69	70.492	ENSDNOG00000025246	LSM14B	100	72.131	Dasypus_novemcinctus
ENSPPYG00000011194	LSM14B	90	72.958	ENSDORG00000016683	Lsm14b	100	71.803	Dipodomys_ordii
ENSPPYG00000011194	LSM14B	58	60.345	ENSETEG00000011188	-	100	63.673	Echinops_telfairi
ENSPPYG00000011194	LSM14B	69	77.895	ENSEASG00005023218	LSM14B	100	77.895	Equus_asinus_asinus
ENSPPYG00000011194	LSM14B	100	77.230	ENSECAG00000010659	LSM14B	100	78.638	Equus_caballus
ENSPPYG00000011194	LSM14B	51	94.792	ENSEEUG00000007331	LSM14B	68	94.792	Erinaceus_europaeus
ENSPPYG00000011194	LSM14B	96	52.344	ENSELUG00000005780	lsm14b	92	52.044	Esox_lucius
ENSPPYG00000011194	LSM14B	90	49.858	ENSELUG00000016299	LSM14B	99	50.646	Esox_lucius
ENSPPYG00000011194	LSM14B	100	74.314	ENSFCAG00000003248	LSM14B	100	77.000	Felis_catus
ENSPPYG00000011194	LSM14B	89	72.829	ENSFDAG00000002214	LSM14B	100	77.457	Fukomys_damarensis
ENSPPYG00000011194	LSM14B	100	47.901	ENSFHEG00000006237	lsm14b	100	47.901	Fundulus_heteroclitus
ENSPPYG00000011194	LSM14B	100	49.109	ENSGMOG00000017115	lsm14b	99	47.462	Gadus_morhua
ENSPPYG00000011194	LSM14B	99	73.131	ENSGALG00000005125	LSM14B	99	73.832	Gallus_gallus
ENSPPYG00000011194	LSM14B	66	38.610	ENSGAFG00000013723	LSM14B	54	47.500	Gambusia_affinis
ENSPPYG00000011194	LSM14B	90	45.431	ENSGAFG00000020318	lsm14b	65	69.231	Gambusia_affinis
ENSPPYG00000011194	LSM14B	91	49.730	ENSGACG00000009973	lsm14b	92	49.322	Gasterosteus_aculeatus
ENSPPYG00000011194	LSM14B	91	74.380	ENSGGOG00000005630	LSM14B	100	77.049	Gorilla_gorilla
ENSPPYG00000011194	LSM14B	100	75.000	ENSHGLG00000015055	LSM14B	100	79.177	Heterocephalus_glaber_female
ENSPPYG00000011194	LSM14B	89	71.148	ENSHGLG00100015273	LSM14B	100	75.723	Heterocephalus_glaber_male
ENSPPYG00000011194	LSM14B	95	47.135	ENSHCOG00000018747	LSM14B	92	46.721	Hippocampus_comes
ENSPPYG00000011194	LSM14B	60	40.870	ENSHCOG00000004867	lsm14b	86	39.149	Hippocampus_comes
ENSPPYG00000011194	LSM14B	90	49.604	ENSIPUG00000014946	lsm14b	95	53.695	Ictalurus_punctatus
ENSPPYG00000011194	LSM14B	89	73.950	ENSSTOG00000020482	LSM14B	100	78.035	Ictidomys_tridecemlineatus
ENSPPYG00000011194	LSM14B	99	75.696	ENSJJAG00000012728	Lsm14b	99	75.765	Jaculus_jaculus
ENSPPYG00000011194	LSM14B	90	49.189	ENSKMAG00000017524	lsm14b	93	49.333	Kryptolebias_marmoratus
ENSPPYG00000011194	LSM14B	69	38.722	ENSLBEG00000007951	LSM14B	86	38.034	Labrus_bergylta
ENSPPYG00000011194	LSM14B	99	62.175	ENSLACG00000003849	LSM14B	99	61.702	Latimeria_chalumnae
ENSPPYG00000011194	LSM14B	99	57.002	ENSLOCG00000003746	lsm14b	99	56.049	Lepisosteus_oculatus
ENSPPYG00000011194	LSM14B	90	70.083	ENSLAFG00000007492	LSM14B	100	73.714	Loxodonta_africana
ENSPPYG00000011194	LSM14B	100	80.660	ENSMFAG00000041479	LSM14B	100	79.481	Macaca_fascicularis
ENSPPYG00000011194	LSM14B	100	77.500	ENSMMUG00000014084	LSM14B	100	98.190	Macaca_mulatta
ENSPPYG00000011194	LSM14B	100	77.500	ENSMNEG00000045573	LSM14B	100	98.190	Macaca_nemestrina
ENSPPYG00000011194	LSM14B	89	74.790	ENSMLEG00000040895	LSM14B	100	99.438	Mandrillus_leucophaeus
ENSPPYG00000011194	LSM14B	99	46.015	ENSMAMG00000024124	LSM14B	91	46.779	Mastacembelus_armatus
ENSPPYG00000011194	LSM14B	90	48.787	ENSMAMG00000020539	lsm14b	92	48.800	Mastacembelus_armatus
ENSPPYG00000011194	LSM14B	89	48.333	ENSMZEG00005000987	lsm14b	92	49.864	Maylandia_zebra
ENSPPYG00000011194	LSM14B	91	69.972	ENSMGAG00000005300	LSM14B	100	69.337	Meleagris_gallopavo
ENSPPYG00000011194	LSM14B	100	75.062	ENSMAUG00000020700	Lsm14b	100	76.250	Mesocricetus_auratus
ENSPPYG00000011194	LSM14B	100	78.404	ENSMICG00000014675	LSM14B	99	92.488	Microcebus_murinus
ENSPPYG00000011194	LSM14B	100	77.078	ENSMOCG00000020600	Lsm14b	100	78.756	Microtus_ochrogaster
ENSPPYG00000011194	LSM14B	61	54.545	ENSMOCG00000005119	-	93	52.015	Microtus_ochrogaster
ENSPPYG00000011194	LSM14B	90	48.352	ENSMMOG00000020042	lsm14b	95	48.396	Mola_mola
ENSPPYG00000011194	LSM14B	91	44.353	ENSMMOG00000017321	LSM14B	91	45.299	Mola_mola
ENSPPYG00000011194	LSM14B	69	66.013	ENSMODG00000016690	LSM14B	71	88.889	Monodelphis_domestica
ENSPPYG00000011194	LSM14B	94	49.862	ENSMALG00000004783	lsm14b	92	48.571	Monopterus_albus
ENSPPYG00000011194	LSM14B	100	78.066	MGP_CAROLIEiJ_G0024770	Lsm14b	100	79.953	Mus_caroli
ENSPPYG00000011194	LSM14B	100	75.500	ENSMUSG00000039108	Lsm14b	100	75.750	Mus_musculus
ENSPPYG00000011194	LSM14B	100	78.302	MGP_PahariEiJ_G0026214	Lsm14b	100	80.189	Mus_pahari
ENSPPYG00000011194	LSM14B	100	78.302	MGP_SPRETEiJ_G0025693	Lsm14b	100	80.189	Mus_spretus
ENSPPYG00000011194	LSM14B	90	74.352	ENSMPUG00000007584	LSM14B	95	76.684	Mustela_putorius_furo
ENSPPYG00000011194	LSM14B	100	72.500	ENSMLUG00000000304	LSM14B	100	74.250	Myotis_lucifugus
ENSPPYG00000011194	LSM14B	89	75.070	ENSNLEG00000015757	LSM14B	100	99.438	Nomascus_leucogenys
ENSPPYG00000011194	LSM14B	63	67.355	ENSMEUG00000006305	-	99	65.702	Notamacropus_eugenii
ENSPPYG00000011194	LSM14B	79	92.763	ENSMEUG00000008267	-	100	77.519	Notamacropus_eugenii
ENSPPYG00000011194	LSM14B	50	95.000	ENSOPRG00000000447	-	59	95.000	Ochotona_princeps
ENSPPYG00000011194	LSM14B	100	75.500	ENSODEG00000004099	LSM14B	100	79.434	Octodon_degus
ENSPPYG00000011194	LSM14B	89	49.589	ENSONIG00000020318	lsm14b	92	50.681	Oreochromis_niloticus
ENSPPYG00000011194	LSM14B	72	71.119	ENSOANG00000003370	LSM14B	99	68.231	Ornithorhynchus_anatinus
ENSPPYG00000011194	LSM14B	90	72.034	ENSOCUG00000006279	LSM14B	100	70.506	Oryctolagus_cuniculus
ENSPPYG00000011194	LSM14B	90	46.196	ENSORLG00000013525	lsm14b	92	48.649	Oryzias_latipes
ENSPPYG00000011194	LSM14B	90	46.196	ENSORLG00020020553	lsm14b	92	48.649	Oryzias_latipes_hni
ENSPPYG00000011194	LSM14B	92	43.836	ENSORLG00015013157	LSM14B	91	42.778	Oryzias_latipes_hsok
ENSPPYG00000011194	LSM14B	90	46.196	ENSORLG00015016862	lsm14b	92	48.649	Oryzias_latipes_hsok
ENSPPYG00000011194	LSM14B	100	79.481	ENSOGAG00000003915	LSM14B	100	79.953	Otolemur_garnettii
ENSPPYG00000011194	LSM14B	91	75.128	ENSOARG00000014706	LSM14B	98	76.762	Ovis_aries
ENSPPYG00000011194	LSM14B	91	74.380	ENSPPAG00000035799	LSM14B	100	98.876	Pan_paniscus
ENSPPYG00000011194	LSM14B	100	74.564	ENSPPRG00000009197	LSM14B	100	77.000	Panthera_pardus
ENSPPYG00000011194	LSM14B	67	70.707	ENSPTIG00000021518	LSM14B	100	73.311	Panthera_tigris_altaica
ENSPPYG00000011194	LSM14B	100	77.500	ENSPTRG00000013696	LSM14B	100	98.190	Pan_troglodytes
ENSPPYG00000011194	LSM14B	100	77.250	ENSPANG00000011747	LSM14B	100	97.738	Papio_anubis
ENSPPYG00000011194	LSM14B	99	52.228	ENSPKIG00000003275	lsm14b	94	81.188	Paramormyrops_kingsleyae
ENSPPYG00000011194	LSM14B	90	66.393	ENSPSIG00000014762	LSM14B	100	69.859	Pelodiscus_sinensis
ENSPPYG00000011194	LSM14B	99	75.505	ENSPEMG00000017688	Lsm14b	100	76.263	Peromyscus_maniculatus_bairdii
ENSPPYG00000011194	LSM14B	100	47.912	ENSPFOG00000005631	lsm14b	92	46.361	Poecilia_formosa
ENSPPYG00000011194	LSM14B	90	44.751	ENSPLAG00000005793	LSM14B	91	43.716	Poecilia_latipinna
ENSPPYG00000011194	LSM14B	100	47.525	ENSPLAG00000002449	lsm14b	92	46.631	Poecilia_latipinna
ENSPPYG00000011194	LSM14B	89	44.568	ENSPMEG00000022953	LSM14B	91	43.836	Poecilia_mexicana
ENSPPYG00000011194	LSM14B	100	47.277	ENSPMEG00000000745	lsm14b	92	46.361	Poecilia_mexicana
ENSPPYG00000011194	LSM14B	100	76.000	ENSPCOG00000013625	LSM14B	96	91.981	Propithecus_coquereli
ENSPPYG00000011194	LSM14B	80	87.338	ENSPVAG00000017918	LSM14B	100	87.338	Pteropus_vampyrus
ENSPPYG00000011194	LSM14B	99	56.919	ENSPNAG00000012777	lsm14b	99	57.180	Pygocentrus_nattereri
ENSPPYG00000011194	LSM14B	100	78.066	ENSRNOG00000054557	Lsm14b	100	79.953	Rattus_norvegicus
ENSPPYG00000011194	LSM14B	89	79.112	ENSRBIG00000033461	LSM14B	99	76.190	Rhinopithecus_bieti
ENSPPYG00000011194	LSM14B	91	75.549	ENSRROG00000042949	LSM14B	100	78.105	Rhinopithecus_roxellana
ENSPPYG00000011194	LSM14B	89	74.790	ENSSBOG00000032820	LSM14B	99	97.727	Saimiri_boliviensis_boliviensis
ENSPPYG00000011194	LSM14B	90	68.698	ENSSHAG00000015528	LSM14B	100	66.230	Sarcophilus_harrisii
ENSPPYG00000011194	LSM14B	90	55.402	ENSSFOG00015004627	lsm14b	92	55.220	Scleropages_formosus
ENSPPYG00000011194	LSM14B	90	49.865	ENSSMAG00000012725	lsm14b	92	50.552	Scophthalmus_maximus
ENSPPYG00000011194	LSM14B	90	50.959	ENSSDUG00000020977	lsm14b	92	50.135	Seriola_dumerili
ENSPPYG00000011194	LSM14B	99	72.577	ENSSPUG00000014360	LSM14B	99	71.868	Sphenodon_punctatus
ENSPPYG00000011194	LSM14B	90	50.416	ENSSPAG00000020915	lsm14b	92	51.977	Stegastes_partitus
ENSPPYG00000011194	LSM14B	100	81.772	ENSSSCG00000026052	LSM14B	100	73.115	Sus_scrofa
ENSPPYG00000011194	LSM14B	90	68.785	ENSTGUG00000007884	LSM14B	100	67.127	Taeniopygia_guttata
ENSPPYG00000011194	LSM14B	92	44.180	ENSTRUG00000001529	LSM14B	92	46.774	Takifugu_rubripes
ENSPPYG00000011194	LSM14B	83	92.857	ENSTTRG00000011043	LSM14B	100	77.922	Tursiops_truncatus
ENSPPYG00000011194	LSM14B	97	78.149	ENSUAMG00000025298	LSM14B	99	78.149	Ursus_americanus
ENSPPYG00000011194	LSM14B	97	78.149	ENSUMAG00000000480	LSM14B	99	78.149	Ursus_maritimus
ENSPPYG00000011194	LSM14B	90	71.191	ENSVVUG00000015920	LSM14B	100	76.491	Vulpes_vulpes
ENSPPYG00000011194	LSM14B	84	63.661	ENSXETG00000001997	lsm14b	99	65.976	Xenopus_tropicalis