EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000011256 (Gene tree)
Gene ID: 100172214
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 57191 bases
Position: chr20:62422293-62479483
Accession: 15860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000012574	PRP1_N	PF06424.12	1.1e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000013072	PRPF6-201	3547	-	ENSPPYP00000012574	941 (aa)	-	H2P2N7

Gene Model

Click here to download ENSPPYG00000011256's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011256's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011256	PRPF6	100	99.469	ENSG00000101161	PRPF6	100	99.469	Homo_sapiens
ENSPPYG00000011256	PRPF6	100	91.817	ENSAPOG00000010395	prpf6	96	92.242	Acanthochromis_polyacanthus
ENSPPYG00000011256	PRPF6	100	95.860	ENSAMEG00000001916	PRPF6	99	95.860	Ailuropoda_melanoleuca
ENSPPYG00000011256	PRPF6	100	91.498	ENSACIG00000019862	prpf6	96	91.923	Amphilophus_citrinellus
ENSPPYG00000011256	PRPF6	100	91.711	ENSAOCG00000012988	prpf6	96	92.136	Amphiprion_ocellaris
ENSPPYG00000011256	PRPF6	100	85.016	ENSAPEG00000008301	prpf6	100	85.547	Amphiprion_percula
ENSPPYG00000011256	PRPF6	100	91.180	ENSATEG00000005581	prpf6	96	91.605	Anabas_testudineus
ENSPPYG00000011256	PRPF6	100	96.493	ENSACAG00000006464	PRPF6	95	96.493	Anolis_carolinensis
ENSPPYG00000011256	PRPF6	100	98.618	ENSANAG00000012661	PRPF6	100	98.822	Aotus_nancymaae
ENSPPYG00000011256	PRPF6	100	91.392	ENSACLG00000025875	prpf6	96	91.817	Astatotilapia_calliptera
ENSPPYG00000011256	PRPF6	99	91.702	ENSAMXG00000001929	prpf6	96	92.128	Astyanax_mexicanus
ENSPPYG00000011256	PRPF6	100	96.812	ENSBTAG00000011656	PRPF6	100	96.812	Bos_taurus
ENSPPYG00000011256	PRPF6	100	98.618	ENSCJAG00000010616	PRPF6	100	98.618	Callithrix_jacchus
ENSPPYG00000011256	PRPF6	100	97.131	ENSCAFG00000013165	PRPF6	100	97.131	Canis_familiaris
ENSPPYG00000011256	PRPF6	100	97.131	ENSCAFG00020002050	PRPF6	100	97.131	Canis_lupus_dingo
ENSPPYG00000011256	PRPF6	100	96.812	ENSCHIG00000018187	PRPF6	100	96.812	Capra_hircus
ENSPPYG00000011256	PRPF6	100	97.768	ENSTSYG00000007814	PRPF6	100	97.768	Carlito_syrichta
ENSPPYG00000011256	PRPF6	97	96.292	ENSCAPG00000015077	PRPF6	100	96.292	Cavia_aperea
ENSPPYG00000011256	PRPF6	100	97.556	ENSCPOG00000007518	PRPF6	100	97.556	Cavia_porcellus
ENSPPYG00000011256	PRPF6	100	95.324	ENSCCAG00000024564	PRPF6	100	95.324	Cebus_capucinus
ENSPPYG00000011256	PRPF6	100	99.362	ENSCATG00000037473	PRPF6	100	99.362	Cercocebus_atys
ENSPPYG00000011256	PRPF6	100	93.518	ENSCLAG00000003854	PRPF6	100	93.518	Chinchilla_lanigera
ENSPPYG00000011256	PRPF6	100	94.298	ENSCSAG00000016742	PRPF6	100	94.298	Chlorocebus_sabaeus
ENSPPYG00000011256	PRPF6	85	80.488	ENSCHOG00000003315	-	100	80.488	Choloepus_hoffmanni
ENSPPYG00000011256	PRPF6	100	96.706	ENSCPBG00000013964	PRPF6	96	96.706	Chrysemys_picta_bellii
ENSPPYG00000011256	PRPF6	99	72.622	ENSCING00000008817	-	99	72.622	Ciona_intestinalis
ENSPPYG00000011256	PRPF6	100	99.362	ENSCANG00000038230	PRPF6	100	99.362	Colobus_angolensis_palliatus
ENSPPYG00000011256	PRPF6	100	97.662	ENSCGRG00001022666	Prpf6	100	97.662	Cricetulus_griseus_chok1gshd
ENSPPYG00000011256	PRPF6	100	86.185	ENSCSEG00000018561	prpf6	100	86.610	Cynoglossus_semilaevis
ENSPPYG00000011256	PRPF6	100	91.817	ENSCVAG00000010550	prpf6	96	92.242	Cyprinodon_variegatus
ENSPPYG00000011256	PRPF6	100	91.180	ENSDARG00000091367	prpf6	99	91.605	Danio_rerio
ENSPPYG00000011256	PRPF6	100	96.281	ENSDNOG00000040544	PRPF6	100	96.281	Dasypus_novemcinctus
ENSPPYG00000011256	PRPF6	91	96.495	ENSDORG00000005406	Prpf6	100	96.495	Dipodomys_ordii
ENSPPYG00000011256	PRPF6	99	71.459	FBgn0036828	CG6841	98	71.888	Drosophila_melanogaster
ENSPPYG00000011256	PRPF6	85	93.713	ENSETEG00000004447	PRPF6	85	93.713	Echinops_telfairi
ENSPPYG00000011256	PRPF6	99	86.214	ENSEBUG00000008835	prpf6	99	86.214	Eptatretus_burgeri
ENSPPYG00000011256	PRPF6	100	96.918	ENSEASG00005023115	PRPF6	100	96.918	Equus_asinus_asinus
ENSPPYG00000011256	PRPF6	100	92.774	ENSECAG00000013983	PRPF6	100	92.774	Equus_caballus
ENSPPYG00000011256	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSPPYG00000011256	PRPF6	100	90.436	ENSELUG00000001945	prpf6	93	90.436	Esox_lucius
ENSPPYG00000011256	PRPF6	100	96.918	ENSFCAG00000001183	PRPF6	100	96.918	Felis_catus
ENSPPYG00000011256	PRPF6	100	96.706	ENSFALG00000010326	-	97	96.706	Ficedula_albicollis
ENSPPYG00000011256	PRPF6	100	89.054	ENSFALG00000006046	-	97	89.054	Ficedula_albicollis
ENSPPYG00000011256	PRPF6	100	96.068	ENSFDAG00000006451	PRPF6	100	97.392	Fukomys_damarensis
ENSPPYG00000011256	PRPF6	100	92.349	ENSFHEG00000000560	prpf6	96	92.349	Fundulus_heteroclitus
ENSPPYG00000011256	PRPF6	100	88.055	ENSGMOG00000015622	prpf6	99	88.055	Gadus_morhua
ENSPPYG00000011256	PRPF6	100	96.706	ENSGALG00000006001	PRPF6	100	96.706	Gallus_gallus
ENSPPYG00000011256	PRPF6	100	86.823	ENSGAFG00000021109	prpf6	96	87.248	Gambusia_affinis
ENSPPYG00000011256	PRPF6	100	90.329	ENSGACG00000002576	prpf6	99	90.329	Gasterosteus_aculeatus
ENSPPYG00000011256	PRPF6	100	96.599	ENSGAGG00000008653	PRPF6	96	96.599	Gopherus_agassizii
ENSPPYG00000011256	PRPF6	100	99.469	ENSGGOG00000016876	PRPF6	100	99.469	Gorilla_gorilla
ENSPPYG00000011256	PRPF6	100	91.392	ENSHBUG00000004496	prpf6	96	91.817	Haplochromis_burtoni
ENSPPYG00000011256	PRPF6	100	97.343	ENSHGLG00000009222	PRPF6	100	97.343	Heterocephalus_glaber_female
ENSPPYG00000011256	PRPF6	97	97.274	ENSHGLG00100016600	PRPF6	100	97.274	Heterocephalus_glaber_male
ENSPPYG00000011256	PRPF6	100	90.223	ENSHCOG00000011513	prpf6	96	90.648	Hippocampus_comes
ENSPPYG00000011256	PRPF6	100	92.242	ENSIPUG00000004912	prpf6	96	92.242	Ictalurus_punctatus
ENSPPYG00000011256	PRPF6	100	94.798	ENSSTOG00000002922	PRPF6	100	94.798	Ictidomys_tridecemlineatus
ENSPPYG00000011256	PRPF6	100	97.556	ENSJJAG00000000836	Prpf6	100	97.556	Jaculus_jaculus
ENSPPYG00000011256	PRPF6	100	91.392	ENSKMAG00000017800	prpf6	96	91.817	Kryptolebias_marmoratus
ENSPPYG00000011256	PRPF6	100	90.861	ENSLBEG00000012582	prpf6	96	90.861	Labrus_bergylta
ENSPPYG00000011256	PRPF6	100	93.411	ENSLOCG00000004827	prpf6	96	92.455	Lepisosteus_oculatus
ENSPPYG00000011256	PRPF6	100	96.493	ENSLAFG00000005272	PRPF6	100	96.493	Loxodonta_africana
ENSPPYG00000011256	PRPF6	100	99.362	ENSMFAG00000037542	PRPF6	100	99.362	Macaca_fascicularis
ENSPPYG00000011256	PRPF6	100	92.675	ENSMMUG00000015558	PRPF6	98	98.787	Macaca_mulatta
ENSPPYG00000011256	PRPF6	100	84.958	ENSMNEG00000045555	PRPF6	100	84.958	Macaca_nemestrina
ENSPPYG00000011256	PRPF6	100	91.498	ENSMAMG00000010718	prpf6	96	91.923	Mastacembelus_armatus
ENSPPYG00000011256	PRPF6	94	90.816	ENSMZEG00005026539	prpf6	100	91.270	Maylandia_zebra
ENSPPYG00000011256	PRPF6	100	90.870	ENSMZEG00005015261	-	99	91.295	Maylandia_zebra
ENSPPYG00000011256	PRPF6	97	96.619	ENSMGAG00000006634	PRPF6	100	96.619	Meleagris_gallopavo
ENSPPYG00000011256	PRPF6	100	97.768	ENSMAUG00000013969	Prpf6	100	97.768	Mesocricetus_auratus
ENSPPYG00000011256	PRPF6	87	97.080	ENSMICG00000017793	PRPF6	99	97.080	Microcebus_murinus
ENSPPYG00000011256	PRPF6	100	97.662	ENSMOCG00000001701	Prpf6	100	97.662	Microtus_ochrogaster
ENSPPYG00000011256	PRPF6	100	90.542	ENSMMOG00000020419	prpf6	100	90.967	Mola_mola
ENSPPYG00000011256	PRPF6	99	97.781	ENSMODG00000017051	PRPF6	99	97.781	Monodelphis_domestica
ENSPPYG00000011256	PRPF6	99	91.622	ENSMALG00000000089	prpf6	100	91.622	Monopterus_albus
ENSPPYG00000011256	PRPF6	100	91.073	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSPPYG00000011256	PRPF6	100	97.768	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSPPYG00000011256	PRPF6	100	97.768	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSPPYG00000011256	PRPF6	100	97.768	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSPPYG00000011256	PRPF6	91	96.663	ENSMPUG00000008673	PRPF6	99	96.663	Mustela_putorius_furo
ENSPPYG00000011256	PRPF6	100	97.662	ENSNGAG00000003365	Prpf6	100	97.662	Nannospalax_galili
ENSPPYG00000011256	PRPF6	100	91.498	ENSNBRG00000015025	prpf6	96	91.923	Neolamprologus_brichardi
ENSPPYG00000011256	PRPF6	100	99.362	ENSNLEG00000010208	PRPF6	100	99.362	Nomascus_leucogenys
ENSPPYG00000011256	PRPF6	100	87.149	ENSMEUG00000009824	-	90	87.352	Notamacropus_eugenii
ENSPPYG00000011256	PRPF6	100	92.136	ENSODEG00000004841	PRPF6	100	92.136	Octodon_degus
ENSPPYG00000011256	PRPF6	100	91.392	ENSONIG00000017406	prpf6	96	91.817	Oreochromis_niloticus
ENSPPYG00000011256	PRPF6	100	96.918	ENSOANG00000004920	PRPF6	100	96.918	Ornithorhynchus_anatinus
ENSPPYG00000011256	PRPF6	99	95.601	ENSOCUG00000014151	PRPF6	100	95.601	Oryctolagus_cuniculus
ENSPPYG00000011256	PRPF6	100	91.392	ENSORLG00000009592	prpf6	96	91.392	Oryzias_latipes
ENSPPYG00000011256	PRPF6	100	91.498	ENSORLG00020001458	prpf6	96	91.498	Oryzias_latipes_hni
ENSPPYG00000011256	PRPF6	100	91.498	ENSORLG00015018762	prpf6	96	91.498	Oryzias_latipes_hsok
ENSPPYG00000011256	PRPF6	100	91.392	ENSOMEG00000012174	prpf6	96	91.817	Oryzias_melastigma
ENSPPYG00000011256	PRPF6	100	90.446	ENSOGAG00000007573	PRPF6	100	90.446	Otolemur_garnettii
ENSPPYG00000011256	PRPF6	100	96.387	ENSOARG00000008776	PRPF6	99	96.387	Ovis_aries
ENSPPYG00000011256	PRPF6	100	99.469	ENSPPAG00000008686	PRPF6	100	99.469	Pan_paniscus
ENSPPYG00000011256	PRPF6	100	96.918	ENSPPRG00000008497	PRPF6	100	96.918	Panthera_pardus
ENSPPYG00000011256	PRPF6	97	96.838	ENSPTIG00000011184	PRPF6	97	96.838	Panthera_tigris_altaica
ENSPPYG00000011256	PRPF6	100	99.469	ENSPTRG00000013765	PRPF6	100	99.469	Pan_troglodytes
ENSPPYG00000011256	PRPF6	100	98.831	ENSPANG00000024135	PRPF6	100	98.831	Papio_anubis
ENSPPYG00000011256	PRPF6	100	92.774	ENSPKIG00000005627	prpf6	99	93.199	Paramormyrops_kingsleyae
ENSPPYG00000011256	PRPF6	94	96.712	ENSPSIG00000007717	PRPF6	100	96.712	Pelodiscus_sinensis
ENSPPYG00000011256	PRPF6	100	89.172	ENSPMGG00000008925	prpf6	96	89.384	Periophthalmus_magnuspinnatus
ENSPPYG00000011256	PRPF6	100	97.662	ENSPEMG00000016036	Prpf6	100	97.662	Peromyscus_maniculatus_bairdii
ENSPPYG00000011256	PRPF6	99	87.248	ENSPMAG00000006144	prpf6	99	87.248	Petromyzon_marinus
ENSPPYG00000011256	PRPF6	100	97.237	ENSPCIG00000017909	PRPF6	100	97.237	Phascolarctos_cinereus
ENSPPYG00000011256	PRPF6	100	91.711	ENSPFOG00000006431	prpf6	96	92.136	Poecilia_formosa
ENSPPYG00000011256	PRPF6	100	91.605	ENSPLAG00000005974	prpf6	96	92.030	Poecilia_latipinna
ENSPPYG00000011256	PRPF6	100	91.817	ENSPMEG00000009977	prpf6	96	92.242	Poecilia_mexicana
ENSPPYG00000011256	PRPF6	100	91.711	ENSPREG00000017993	prpf6	92	92.136	Poecilia_reticulata
ENSPPYG00000011256	PRPF6	95	98.856	ENSPCAG00000006536	PRPF6	88	98.856	Procavia_capensis
ENSPPYG00000011256	PRPF6	100	97.237	ENSPCOG00000016881	PRPF6	100	97.237	Propithecus_coquereli
ENSPPYG00000011256	PRPF6	100	90.861	ENSPVAG00000014316	PRPF6	100	90.861	Pteropus_vampyrus
ENSPPYG00000011256	PRPF6	100	74.709	ENSPNYG00000001939	prpf6	96	80.085	Pundamilia_nyererei
ENSPPYG00000011256	PRPF6	100	92.030	ENSPNAG00000015606	prpf6	96	92.455	Pygocentrus_nattereri
ENSPPYG00000011256	PRPF6	100	97.662	ENSRNOG00000051498	Prpf6	100	97.662	Rattus_norvegicus
ENSPPYG00000011256	PRPF6	100	99.362	ENSRBIG00000043613	PRPF6	100	99.362	Rhinopithecus_bieti
ENSPPYG00000011256	PRPF6	100	95.979	ENSRROG00000040969	PRPF6	100	95.979	Rhinopithecus_roxellana
ENSPPYG00000011256	PRPF6	91	94.513	ENSSBOG00000020632	PRPF6	91	94.513	Saimiri_boliviensis_boliviensis
ENSPPYG00000011256	PRPF6	100	97.237	ENSSHAG00000016810	PRPF6	100	97.237	Sarcophilus_harrisii
ENSPPYG00000011256	PRPF6	99	93.018	ENSSFOG00015020859	prpf6	100	93.448	Scleropages_formosus
ENSPPYG00000011256	PRPF6	100	90.755	ENSSMAG00000008112	prpf6	96	90.755	Scophthalmus_maximus
ENSPPYG00000011256	PRPF6	100	91.392	ENSSDUG00000016142	prpf6	96	91.817	Seriola_dumerili
ENSPPYG00000011256	PRPF6	100	91.392	ENSSLDG00000025283	prpf6	100	88.310	Seriola_lalandi_dorsalis
ENSPPYG00000011256	PRPF6	94	95.465	ENSSPUG00000018260	PRPF6	100	95.465	Sphenodon_punctatus
ENSPPYG00000011256	PRPF6	100	91.392	ENSSPAG00000015850	prpf6	96	91.817	Stegastes_partitus
ENSPPYG00000011256	PRPF6	100	96.599	ENSSSCG00000029119	PRPF6	100	96.372	Sus_scrofa
ENSPPYG00000011256	PRPF6	100	96.812	ENSTGUG00000007221	PRPF6	99	96.812	Taeniopygia_guttata
ENSPPYG00000011256	PRPF6	100	90.329	ENSTRUG00000002920	prpf6	96	90.755	Takifugu_rubripes
ENSPPYG00000011256	PRPF6	100	84.038	ENSTNIG00000017873	prpf6	100	84.461	Tetraodon_nigroviridis
ENSPPYG00000011256	PRPF6	86	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSPPYG00000011256	PRPF6	100	96.068	ENSTTRG00000013068	PRPF6	100	96.068	Tursiops_truncatus
ENSPPYG00000011256	PRPF6	98	95.543	ENSUMAG00000021631	PRPF6	98	95.543	Ursus_maritimus
ENSPPYG00000011256	PRPF6	100	97.131	ENSVVUG00000014948	PRPF6	100	97.131	Vulpes_vulpes
ENSPPYG00000011256	PRPF6	100	94.474	ENSXETG00000012054	prpf6	97	94.899	Xenopus_tropicalis
ENSPPYG00000011256	PRPF6	100	91.817	ENSXCOG00000008082	prpf6	96	92.242	Xiphophorus_couchianus
ENSPPYG00000011256	PRPF6	100	91.817	ENSXMAG00000015581	prpf6	96	92.242	Xiphophorus_maculatus