EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000011355 (Gene tree)
Gene ID: 100432990
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 62221 bases
Position: chr21:32560835-32623055
Accession: 100432990
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000012677	RRM_1	PF00076.22	2.2e-09	1	1
ENSPPYP00000024761	RRM_1	PF00076.22	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000013179	SCAF4-202	3447	-	ENSPPYP00000012677	1148 (aa)	XP_002830674	H2P2Y6
ENSPPYT00000034028	SCAF4-201	3933	XM_009233875	ENSPPYP00000024761	1134 (aa)	XP_009232150	K7EW22

Gene Model

Click here to download ENSPPYG00000011355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011355	SCAF4	100	99.477	ENSG00000156304	SCAF4	100	99.477	Homo_sapiens
ENSPPYG00000011355	SCAF4	73	93.510	ENSAMEG00000014987	SCAF4	96	93.990	Ailuropoda_melanoleuca
ENSPPYG00000011355	SCAF4	100	75.460	ENSAPLG00000002509	SCAF4	59	83.155	Anas_platyrhynchos
ENSPPYG00000011355	SCAF4	96	70.093	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSPPYG00000011355	SCAF4	100	98.435	ENSANAG00000037494	SCAF4	100	98.435	Aotus_nancymaae
ENSPPYG00000011355	SCAF4	93	50.045	ENSAMXG00000008585	scaf4a	60	63.102	Astyanax_mexicanus
ENSPPYG00000011355	SCAF4	100	92.522	ENSBTAG00000018855	SCAF4	100	92.261	Bos_taurus
ENSPPYG00000011355	SCAF4	100	98.435	ENSCJAG00000008993	SCAF4	100	98.435	Callithrix_jacchus
ENSPPYG00000011355	SCAF4	100	94.537	ENSCAFG00000008863	SCAF4	99	94.537	Canis_familiaris
ENSPPYG00000011355	SCAF4	100	91.270	ENSCAFG00020026019	SCAF4	100	94.094	Canis_lupus_dingo
ENSPPYG00000011355	SCAF4	100	92.114	ENSCHIG00000008385	SCAF4	100	91.941	Capra_hircus
ENSPPYG00000011355	SCAF4	92	96.237	ENSTSYG00000011344	SCAF4	99	96.254	Carlito_syrichta
ENSPPYG00000011355	SCAF4	100	89.655	ENSCPOG00000012443	SCAF4	100	90.000	Cavia_porcellus
ENSPPYG00000011355	SCAF4	100	98.519	ENSCCAG00000033727	SCAF4	100	98.519	Cebus_capucinus
ENSPPYG00000011355	SCAF4	100	98.267	ENSCATG00000030379	SCAF4	100	98.267	Cercocebus_atys
ENSPPYG00000011355	SCAF4	100	90.885	ENSCLAG00000006298	SCAF4	100	92.101	Chinchilla_lanigera
ENSPPYG00000011355	SCAF4	100	98.697	ENSCSAG00000009438	SCAF4	100	98.697	Chlorocebus_sabaeus
ENSPPYG00000011355	SCAF4	100	98.955	ENSCANG00000029847	SCAF4	100	98.955	Colobus_angolensis_palliatus
ENSPPYG00000011355	SCAF4	100	83.042	ENSCGRG00001020821	Scaf4	100	82.202	Cricetulus_griseus_chok1gshd
ENSPPYG00000011355	SCAF4	100	82.807	ENSCGRG00000014360	Scaf4	99	85.560	Cricetulus_griseus_crigri
ENSPPYG00000011355	SCAF4	58	56.849	ENSCSEG00000012808	-	62	61.244	Cynoglossus_semilaevis
ENSPPYG00000011355	SCAF4	79	52.548	ENSCSEG00000019549	scaf4a	53	55.015	Cynoglossus_semilaevis
ENSPPYG00000011355	SCAF4	100	90.767	ENSDNOG00000019014	SCAF4	94	90.505	Dasypus_novemcinctus
ENSPPYG00000011355	SCAF4	96	80.931	ENSETEG00000000583	SCAF4	99	80.270	Echinops_telfairi
ENSPPYG00000011355	SCAF4	100	93.902	ENSEASG00005007756	SCAF4	100	93.815	Equus_asinus_asinus
ENSPPYG00000011355	SCAF4	100	94.077	ENSECAG00000014248	SCAF4	100	93.815	Equus_caballus
ENSPPYG00000011355	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSPPYG00000011355	SCAF4	100	94.036	ENSFCAG00000002228	SCAF4	100	94.036	Felis_catus
ENSPPYG00000011355	SCAF4	100	89.578	ENSFDAG00000017780	SCAF4	100	89.406	Fukomys_damarensis
ENSPPYG00000011355	SCAF4	100	76.384	ENSGALG00000033965	SCAF4	59	83.384	Gallus_gallus
ENSPPYG00000011355	SCAF4	91	96.281	ENSGGOG00000015557	SCAF4	100	99.695	Gorilla_gorilla
ENSPPYG00000011355	SCAF4	100	90.792	ENSHGLG00000010582	SCAF4	100	91.394	Heterocephalus_glaber_female
ENSPPYG00000011355	SCAF4	100	90.679	ENSHGLG00100009441	SCAF4	100	91.289	Heterocephalus_glaber_male
ENSPPYG00000011355	SCAF4	100	86.667	ENSSTOG00000004450	SCAF4	100	87.018	Ictidomys_tridecemlineatus
ENSPPYG00000011355	SCAF4	100	89.437	ENSJJAG00000019447	Scaf4	99	89.561	Jaculus_jaculus
ENSPPYG00000011355	SCAF4	98	60.873	ENSLACG00000013913	SCAF4	59	69.592	Latimeria_chalumnae
ENSPPYG00000011355	SCAF4	95	57.281	ENSLOCG00000009162	scaf4a	59	67.804	Lepisosteus_oculatus
ENSPPYG00000011355	SCAF4	100	92.537	ENSLAFG00000010710	SCAF4	100	91.776	Loxodonta_africana
ENSPPYG00000011355	SCAF4	100	98.442	ENSMFAG00000037668	SCAF4	100	98.442	Macaca_fascicularis
ENSPPYG00000011355	SCAF4	100	98.355	ENSMMUG00000001712	SCAF4	100	98.355	Macaca_mulatta
ENSPPYG00000011355	SCAF4	100	98.270	ENSMNEG00000032966	SCAF4	100	98.270	Macaca_nemestrina
ENSPPYG00000011355	SCAF4	100	98.507	ENSMLEG00000039674	SCAF4	100	98.513	Mandrillus_leucophaeus
ENSPPYG00000011355	SCAF4	100	76.357	ENSMGAG00000014515	SCAF4	59	83.308	Meleagris_gallopavo
ENSPPYG00000011355	SCAF4	100	88.820	ENSMAUG00000013307	Scaf4	100	88.908	Mesocricetus_auratus
ENSPPYG00000011355	SCAF4	100	97.038	ENSMICG00000005256	SCAF4	100	97.038	Microcebus_murinus
ENSPPYG00000011355	SCAF4	100	86.204	ENSMOCG00000012087	Scaf4	95	91.839	Microtus_ochrogaster
ENSPPYG00000011355	SCAF4	100	84.535	ENSMODG00000021040	SCAF4	100	83.666	Monodelphis_domestica
ENSPPYG00000011355	SCAF4	100	83.673	MGP_CAROLIEiJ_G0020944	Scaf4	95	90.464	Mus_caroli
ENSPPYG00000011355	SCAF4	100	83.401	ENSMUSG00000022983	Scaf4	95	89.664	Mus_musculus
ENSPPYG00000011355	SCAF4	100	82.711	MGP_PahariEiJ_G0016649	Scaf4	100	86.667	Mus_pahari
ENSPPYG00000011355	SCAF4	100	84.154	MGP_SPRETEiJ_G0021850	Scaf4	100	85.971	Mus_spretus
ENSPPYG00000011355	SCAF4	100	93.252	ENSMPUG00000001078	SCAF4	100	92.468	Mustela_putorius_furo
ENSPPYG00000011355	SCAF4	99	77.983	ENSMLUG00000011472	SCAF4	79	83.207	Myotis_lucifugus
ENSPPYG00000011355	SCAF4	100	90.877	ENSNGAG00000005214	Scaf4	99	91.308	Nannospalax_galili
ENSPPYG00000011355	SCAF4	100	99.477	ENSNLEG00000003569	SCAF4	100	99.477	Nomascus_leucogenys
ENSPPYG00000011355	SCAF4	79	90.761	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSPPYG00000011355	SCAF4	100	89.974	ENSODEG00000002718	SCAF4	100	88.898	Octodon_degus
ENSPPYG00000011355	SCAF4	71	59.690	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSPPYG00000011355	SCAF4	100	88.927	ENSOCUG00000008336	SCAF4	100	88.927	Oryctolagus_cuniculus
ENSPPYG00000011355	SCAF4	52	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSPPYG00000011355	SCAF4	100	89.017	ENSOGAG00000014653	SCAF4	94	95.718	Otolemur_garnettii
ENSPPYG00000011355	SCAF4	100	91.369	ENSOARG00000013894	SCAF4	99	90.885	Ovis_aries
ENSPPYG00000011355	SCAF4	100	99.477	ENSPPAG00000028535	SCAF4	100	99.477	Pan_paniscus
ENSPPYG00000011355	SCAF4	100	94.040	ENSPPRG00000000635	SCAF4	100	94.061	Panthera_pardus
ENSPPYG00000011355	SCAF4	100	91.093	ENSPTIG00000021578	SCAF4	99	88.792	Panthera_tigris_altaica
ENSPPYG00000011355	SCAF4	100	99.477	ENSPTRG00000013848	SCAF4	100	99.477	Pan_troglodytes
ENSPPYG00000011355	SCAF4	100	98.442	ENSPANG00000017332	SCAF4	100	98.442	Papio_anubis
ENSPPYG00000011355	SCAF4	64	64.380	ENSPKIG00000022408	scaf4a	90	66.816	Paramormyrops_kingsleyae
ENSPPYG00000011355	SCAF4	100	76.910	ENSPSIG00000014242	SCAF4	57	84.365	Pelodiscus_sinensis
ENSPPYG00000011355	SCAF4	61	87.088	ENSPCIG00000028183	SCAF4	91	81.634	Phascolarctos_cinereus
ENSPPYG00000011355	SCAF4	100	96.264	ENSPCOG00000018710	SCAF4	100	96.264	Propithecus_coquereli
ENSPPYG00000011355	SCAF4	100	92.596	ENSPVAG00000005220	SCAF4	100	92.770	Pteropus_vampyrus
ENSPPYG00000011355	SCAF4	76	57.705	ENSPNAG00000016892	scaf4a	60	63.922	Pygocentrus_nattereri
ENSPPYG00000011355	SCAF4	98	86.933	ENSRNOG00000002104	Scaf4	95	86.923	Rattus_norvegicus
ENSPPYG00000011355	SCAF4	100	96.300	ENSRBIG00000040007	SCAF4	99	96.300	Rhinopithecus_bieti
ENSPPYG00000011355	SCAF4	100	98.955	ENSRROG00000029488	SCAF4	100	98.955	Rhinopithecus_roxellana
ENSPPYG00000011355	SCAF4	100	84.405	ENSSHAG00000001581	SCAF4	100	82.768	Sarcophilus_harrisii
ENSPPYG00000011355	SCAF4	88	47.363	ENSSFOG00015006338	scaf4a	54	58.226	Scleropages_formosus
ENSPPYG00000011355	SCAF4	80	53.560	ENSSMAG00000017901	scaf4a	53	53.666	Scophthalmus_maximus
ENSPPYG00000011355	SCAF4	65	58.423	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSPPYG00000011355	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSPPYG00000011355	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSPPYG00000011355	SCAF4	100	89.220	ENSSARG00000009994	SCAF4	100	89.437	Sorex_araneus
ENSPPYG00000011355	SCAF4	100	90.682	ENSSSCG00000021023	SCAF4	100	90.768	Sus_scrofa
ENSPPYG00000011355	SCAF4	75	72.234	ENSTGUG00000013464	SCAF4	57	85.714	Taeniopygia_guttata
ENSPPYG00000011355	SCAF4	51	58.451	ENSTRUG00000009536	-	65	57.818	Takifugu_rubripes
ENSPPYG00000011355	SCAF4	100	92.681	ENSTTRG00000010963	SCAF4	100	92.355	Tursiops_truncatus
ENSPPYG00000011355	SCAF4	100	92.522	ENSUAMG00000008860	SCAF4	100	92.522	Ursus_americanus
ENSPPYG00000011355	SCAF4	100	90.917	ENSUMAG00000016962	SCAF4	100	91.623	Ursus_maritimus
ENSPPYG00000011355	SCAF4	100	94.537	ENSVVUG00000002953	SCAF4	100	94.537	Vulpes_vulpes
ENSPPYG00000011355	SCAF4	99	55.583	ENSXETG00000007351	scaf4	63	66.476	Xenopus_tropicalis