EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000011359 (Gene tree)
Gene ID: 100435747
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 77881 bases
Position: chr21:33257675-33335555
Accession: 17344
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000012681	Npa1	PF11707.8	5e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000013183	URB1-201	7528	-	ENSPPYP00000012681	2270 (aa)	-	H2P2Z0

Gene Model

Click here to download ENSPPYG00000011359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011359's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011359	URB1	100	96.609	ENSG00000142207	URB1	100	96.609	Homo_sapiens
ENSPPYG00000011359	URB1	99	42.757	ENSAPOG00000020308	urb1	99	42.895	Acanthochromis_polyacanthus
ENSPPYG00000011359	URB1	100	81.470	ENSAMEG00000011998	URB1	99	81.706	Ailuropoda_melanoleuca
ENSPPYG00000011359	URB1	94	44.584	ENSACIG00000003248	urb1	96	44.610	Amphilophus_citrinellus
ENSPPYG00000011359	URB1	99	40.548	ENSAOCG00000010364	urb1	99	41.197	Amphiprion_ocellaris
ENSPPYG00000011359	URB1	99	42.975	ENSAPEG00000010758	urb1	99	43.304	Amphiprion_percula
ENSPPYG00000011359	URB1	98	44.222	ENSATEG00000011790	urb1	96	44.271	Anabas_testudineus
ENSPPYG00000011359	URB1	97	56.318	ENSAPLG00000012791	URB1	100	56.318	Anas_platyrhynchos
ENSPPYG00000011359	URB1	99	53.460	ENSACAG00000002817	URB1	99	52.936	Anolis_carolinensis
ENSPPYG00000011359	URB1	100	93.090	ENSANAG00000024617	URB1	99	93.195	Aotus_nancymaae
ENSPPYG00000011359	URB1	99	44.802	ENSACLG00000024865	urb1	99	44.508	Astatotilapia_calliptera
ENSPPYG00000011359	URB1	99	40.300	ENSAMXG00000012306	urb1	98	40.533	Astyanax_mexicanus
ENSPPYG00000011359	URB1	99	77.149	ENSBTAG00000012412	URB1	99	77.333	Bos_taurus
ENSPPYG00000011359	URB1	100	92.220	ENSCJAG00000009118	URB1	99	92.321	Callithrix_jacchus
ENSPPYG00000011359	URB1	100	81.878	ENSCAFG00000008892	URB1	99	82.026	Canis_familiaris
ENSPPYG00000011359	URB1	100	80.871	ENSCAFG00020025994	-	99	81.015	Canis_lupus_dingo
ENSPPYG00000011359	URB1	100	81.882	ENSCAFG00020025987	-	99	82.031	Canis_lupus_dingo
ENSPPYG00000011359	URB1	99	76.798	ENSCHIG00000015645	URB1	99	77.025	Capra_hircus
ENSPPYG00000011359	URB1	100	85.909	ENSTSYG00000013286	URB1	99	85.986	Carlito_syrichta
ENSPPYG00000011359	URB1	98	79.802	ENSCAPG00000015589	URB1	99	79.865	Cavia_aperea
ENSPPYG00000011359	URB1	99	80.986	ENSCPOG00000006748	URB1	99	81.095	Cavia_porcellus
ENSPPYG00000011359	URB1	100	93.527	ENSCCAG00000021299	URB1	99	93.590	Cebus_capucinus
ENSPPYG00000011359	URB1	100	94.892	ENSCATG00000042630	URB1	99	94.960	Cercocebus_atys
ENSPPYG00000011359	URB1	100	80.835	ENSCLAG00000005262	URB1	99	80.936	Chinchilla_lanigera
ENSPPYG00000011359	URB1	100	93.161	ENSCSAG00000009584	URB1	99	93.222	Chlorocebus_sabaeus
ENSPPYG00000011359	URB1	99	58.968	ENSCPBG00000006454	URB1	99	58.950	Chrysemys_picta_bellii
ENSPPYG00000011359	URB1	100	94.892	ENSCANG00000031088	URB1	99	94.960	Colobus_angolensis_palliatus
ENSPPYG00000011359	URB1	99	76.728	ENSCGRG00001010616	Urb1	99	76.543	Cricetulus_griseus_chok1gshd
ENSPPYG00000011359	URB1	98	76.238	ENSCGRG00000015840	Urb1	99	76.285	Cricetulus_griseus_crigri
ENSPPYG00000011359	URB1	97	49.733	ENSCSEG00000012616	urb1	99	49.733	Cynoglossus_semilaevis
ENSPPYG00000011359	URB1	96	52.147	ENSCVAG00000009076	urb1	98	52.979	Cyprinodon_variegatus
ENSPPYG00000011359	URB1	99	43.122	ENSDARG00000060308	urb1	99	43.507	Danio_rerio
ENSPPYG00000011359	URB1	85	80.952	ENSDNOG00000015586	URB1	99	80.952	Dasypus_novemcinctus
ENSPPYG00000011359	URB1	100	80.282	ENSDORG00000006735	Urb1	99	80.424	Dipodomys_ordii
ENSPPYG00000011359	URB1	92	81.031	ENSETEG00000009080	URB1	92	81.031	Echinops_telfairi
ENSPPYG00000011359	URB1	100	81.866	ENSEASG00005007711	URB1	99	81.898	Equus_asinus_asinus
ENSPPYG00000011359	URB1	97	88.889	ENSECAG00000013206	URB1	99	88.713	Equus_caballus
ENSPPYG00000011359	URB1	58	85.417	ENSEEUG00000003626	-	57	85.417	Erinaceus_europaeus
ENSPPYG00000011359	URB1	99	44.577	ENSELUG00000020516	urb1	98	44.710	Esox_lucius
ENSPPYG00000011359	URB1	100	81.742	ENSFCAG00000002177	URB1	99	82.015	Felis_catus
ENSPPYG00000011359	URB1	98	51.394	ENSFALG00000004636	URB1	99	51.306	Ficedula_albicollis
ENSPPYG00000011359	URB1	100	80.773	ENSFDAG00000007288	URB1	95	80.908	Fukomys_damarensis
ENSPPYG00000011359	URB1	99	41.405	ENSFHEG00000000202	urb1	98	42.407	Fundulus_heteroclitus
ENSPPYG00000011359	URB1	93	47.405	ENSGMOG00000001838	urb1	93	47.237	Gadus_morhua
ENSPPYG00000011359	URB1	99	56.343	ENSGALG00000015887	URB1	99	56.360	Gallus_gallus
ENSPPYG00000011359	URB1	93	52.391	ENSGAFG00000020694	urb1	97	52.391	Gambusia_affinis
ENSPPYG00000011359	URB1	99	44.162	ENSGACG00000011703	urb1	99	44.268	Gasterosteus_aculeatus
ENSPPYG00000011359	URB1	99	58.417	ENSGAGG00000022544	URB1	99	58.399	Gopherus_agassizii
ENSPPYG00000011359	URB1	100	96.609	ENSGGOG00000000285	URB1	100	96.609	Gorilla_gorilla
ENSPPYG00000011359	URB1	99	44.832	ENSHBUG00000001904	urb1	99	44.640	Haplochromis_burtoni
ENSPPYG00000011359	URB1	99	79.150	ENSHGLG00000004907	URB1	99	79.252	Heterocephalus_glaber_female
ENSPPYG00000011359	URB1	99	79.930	ENSHGLG00100010749	URB1	99	80.035	Heterocephalus_glaber_male
ENSPPYG00000011359	URB1	74	47.554	ENSHCOG00000018683	urb1	97	48.532	Hippocampus_comes
ENSPPYG00000011359	URB1	99	40.815	ENSIPUG00000014721	urb1	99	40.967	Ictalurus_punctatus
ENSPPYG00000011359	URB1	100	82.945	ENSSTOG00000004539	URB1	99	83.142	Ictidomys_tridecemlineatus
ENSPPYG00000011359	URB1	99	40.773	ENSKMAG00000006001	urb1	99	47.109	Kryptolebias_marmoratus
ENSPPYG00000011359	URB1	93	51.380	ENSLBEG00000027208	urb1	98	51.380	Labrus_bergylta
ENSPPYG00000011359	URB1	99	48.377	ENSLACG00000017059	URB1	99	48.377	Latimeria_chalumnae
ENSPPYG00000011359	URB1	99	45.948	ENSLOCG00000009190	urb1	99	46.004	Lepisosteus_oculatus
ENSPPYG00000011359	URB1	99	78.816	ENSLAFG00000010407	URB1	99	78.936	Loxodonta_africana
ENSPPYG00000011359	URB1	100	95.112	ENSMFAG00000034391	URB1	96	95.137	Macaca_fascicularis
ENSPPYG00000011359	URB1	100	95.024	ENSMMUG00000010295	URB1	99	95.049	Macaca_mulatta
ENSPPYG00000011359	URB1	100	93.747	ENSMNEG00000032981	URB1	99	93.767	Macaca_nemestrina
ENSPPYG00000011359	URB1	100	95.376	ENSMLEG00000041435	URB1	99	95.447	Mandrillus_leucophaeus
ENSPPYG00000011359	URB1	99	43.082	ENSMAMG00000011238	urb1	98	43.363	Mastacembelus_armatus
ENSPPYG00000011359	URB1	99	39.921	ENSMZEG00005011862	urb1	99	39.756	Maylandia_zebra
ENSPPYG00000011359	URB1	98	56.990	ENSMGAG00000014512	URB1	99	57.009	Meleagris_gallopavo
ENSPPYG00000011359	URB1	92	80.146	ENSMAUG00000010516	Urb1	99	80.412	Mesocricetus_auratus
ENSPPYG00000011359	URB1	99	85.293	ENSMICG00000016424	URB1	99	85.506	Microcebus_murinus
ENSPPYG00000011359	URB1	99	74.537	ENSMOCG00000012613	Urb1	99	74.658	Microtus_ochrogaster
ENSPPYG00000011359	URB1	99	64.314	ENSMODG00000021076	URB1	99	64.440	Monodelphis_domestica
ENSPPYG00000011359	URB1	94	51.913	ENSMALG00000017411	urb1	97	52.335	Monopterus_albus
ENSPPYG00000011359	URB1	99	75.451	MGP_CAROLIEiJ_G0020948	Urb1	99	75.562	Mus_caroli
ENSPPYG00000011359	URB1	99	76.023	ENSMUSG00000039929	Urb1	99	76.136	Mus_musculus
ENSPPYG00000011359	URB1	99	75.803	MGP_PahariEiJ_G0016653	Urb1	99	75.915	Mus_pahari
ENSPPYG00000011359	URB1	99	75.704	MGP_SPRETEiJ_G0021854	Urb1	99	75.827	Mus_spretus
ENSPPYG00000011359	URB1	100	79.930	ENSMPUG00000001123	URB1	99	80.071	Mustela_putorius_furo
ENSPPYG00000011359	URB1	99	77.279	ENSNGAG00000001905	Urb1	99	77.283	Nannospalax_galili
ENSPPYG00000011359	URB1	82	45.636	ENSNBRG00000001049	urb1	99	45.636	Neolamprologus_brichardi
ENSPPYG00000011359	URB1	100	94.584	ENSNLEG00000026872	URB1	100	94.584	Nomascus_leucogenys
ENSPPYG00000011359	URB1	96	59.872	ENSMEUG00000010828	URB1	95	59.936	Notamacropus_eugenii
ENSPPYG00000011359	URB1	99	74.517	ENSOPRG00000013482	URB1	99	74.658	Ochotona_princeps
ENSPPYG00000011359	URB1	100	79.473	ENSODEG00000002587	URB1	99	79.523	Octodon_degus
ENSPPYG00000011359	URB1	99	45.007	ENSONIG00000005599	urb1	99	45.033	Oreochromis_niloticus
ENSPPYG00000011359	URB1	99	80.732	ENSOCUG00000009381	URB1	99	80.902	Oryctolagus_cuniculus
ENSPPYG00000011359	URB1	99	43.476	ENSORLG00000003429	urb1	99	43.495	Oryzias_latipes
ENSPPYG00000011359	URB1	99	43.332	ENSORLG00020013785	urb1	99	43.351	Oryzias_latipes_hni
ENSPPYG00000011359	URB1	95	46.334	ENSORLG00015019421	urb1	97	46.363	Oryzias_latipes_hsok
ENSPPYG00000011359	URB1	77	49.649	ENSOMEG00000002094	urb1	98	49.649	Oryzias_melastigma
ENSPPYG00000011359	URB1	99	84.714	ENSOGAG00000017140	URB1	99	84.748	Otolemur_garnettii
ENSPPYG00000011359	URB1	97	77.589	ENSOARG00000013679	URB1	99	77.504	Ovis_aries
ENSPPYG00000011359	URB1	100	96.830	ENSPPAG00000003423	URB1	100	96.830	Pan_paniscus
ENSPPYG00000011359	URB1	100	81.690	ENSPPRG00000023131	URB1	99	81.971	Panthera_pardus
ENSPPYG00000011359	URB1	92	79.694	ENSPTIG00000016125	URB1	98	79.941	Panthera_tigris_altaica
ENSPPYG00000011359	URB1	100	96.786	ENSPTRG00000013852	URB1	100	96.786	Pan_troglodytes
ENSPPYG00000011359	URB1	100	95.421	ENSPANG00000021964	URB1	99	95.491	Papio_anubis
ENSPPYG00000011359	URB1	99	45.671	ENSPKIG00000003683	urb1	96	46.291	Paramormyrops_kingsleyae
ENSPPYG00000011359	URB1	99	76.540	ENSPEMG00000021205	Urb1	99	76.631	Peromyscus_maniculatus_bairdii
ENSPPYG00000011359	URB1	80	34.249	ENSPMAG00000009733	URB1	100	34.209	Petromyzon_marinus
ENSPPYG00000011359	URB1	99	63.935	ENSPCIG00000016350	URB1	99	64.205	Phascolarctos_cinereus
ENSPPYG00000011359	URB1	96	42.903	ENSPLAG00000004371	urb1	99	42.903	Poecilia_latipinna
ENSPPYG00000011359	URB1	99	43.611	ENSPMEG00000006634	urb1	99	43.611	Poecilia_mexicana
ENSPPYG00000011359	URB1	99	43.853	ENSPREG00000013453	urb1	98	43.853	Poecilia_reticulata
ENSPPYG00000011359	URB1	99	67.698	ENSPCAG00000007430	URB1	99	67.683	Procavia_capensis
ENSPPYG00000011359	URB1	100	86.173	ENSPCOG00000022695	URB1	99	86.472	Propithecus_coquereli
ENSPPYG00000011359	URB1	100	80.053	ENSPVAG00000000889	URB1	99	80.150	Pteropus_vampyrus
ENSPPYG00000011359	URB1	99	43.521	ENSPNYG00000010589	urb1	99	43.308	Pundamilia_nyererei
ENSPPYG00000011359	URB1	99	40.783	ENSPNAG00000019324	urb1	99	40.899	Pygocentrus_nattereri
ENSPPYG00000011359	URB1	99	75.450	ENSRNOG00000002080	Urb1	99	75.649	Rattus_norvegicus
ENSPPYG00000011359	URB1	100	94.540	ENSRBIG00000033122	URB1	99	94.607	Rhinopithecus_bieti
ENSPPYG00000011359	URB1	100	94.584	ENSRROG00000040237	URB1	99	94.651	Rhinopithecus_roxellana
ENSPPYG00000011359	URB1	100	92.386	ENSSBOG00000027672	URB1	99	92.532	Saimiri_boliviensis_boliviensis
ENSPPYG00000011359	URB1	99	63.668	ENSSHAG00000005140	URB1	99	63.788	Sarcophilus_harrisii
ENSPPYG00000011359	URB1	93	46.017	ENSSFOG00015000339	urb1	99	46.298	Scleropages_formosus
ENSPPYG00000011359	URB1	98	44.164	ENSSMAG00000003782	urb1	99	43.977	Scophthalmus_maximus
ENSPPYG00000011359	URB1	99	44.517	ENSSDUG00000012313	urb1	99	44.522	Seriola_dumerili
ENSPPYG00000011359	URB1	99	44.517	ENSSLDG00000023179	urb1	99	44.522	Seriola_lalandi_dorsalis
ENSPPYG00000011359	URB1	99	55.216	ENSSPUG00000012447	URB1	99	55.197	Sphenodon_punctatus
ENSPPYG00000011359	URB1	99	44.289	ENSSPAG00000006325	urb1	99	44.444	Stegastes_partitus
ENSPPYG00000011359	URB1	100	78.804	ENSSSCG00000032024	URB1	99	78.896	Sus_scrofa
ENSPPYG00000011359	URB1	73	57.690	ENSTGUG00000013442	URB1	100	57.356	Taeniopygia_guttata
ENSPPYG00000011359	URB1	99	44.109	ENSTRUG00000009372	urb1	99	43.974	Takifugu_rubripes
ENSPPYG00000011359	URB1	99	42.813	ENSTNIG00000016277	urb1	99	42.965	Tetraodon_nigroviridis
ENSPPYG00000011359	URB1	81	84.348	ENSTBEG00000010044	URB1	81	84.348	Tupaia_belangeri
ENSPPYG00000011359	URB1	91	78.975	ENSTTRG00000007712	URB1	92	79.184	Tursiops_truncatus
ENSPPYG00000011359	URB1	100	81.294	ENSUAMG00000012231	URB1	99	81.441	Ursus_americanus
ENSPPYG00000011359	URB1	93	82.676	ENSUMAG00000017419	URB1	97	82.676	Ursus_maritimus
ENSPPYG00000011359	URB1	68	88.095	ENSVPAG00000001164	URB1	68	88.095	Vicugna_pacos
ENSPPYG00000011359	URB1	100	81.678	ENSVVUG00000000551	URB1	99	81.826	Vulpes_vulpes
ENSPPYG00000011359	URB1	99	50.086	ENSXETG00000009895	urb1	99	50.151	Xenopus_tropicalis
ENSPPYG00000011359	URB1	99	41.099	ENSXCOG00000005500	urb1	99	41.411	Xiphophorus_couchianus
ENSPPYG00000011359	URB1	99	41.337	ENSXMAG00000007253	urb1	99	41.582	Xiphophorus_maculatus