EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000011832 (Gene tree)
Gene ID: 103888537
Gene Symbol: APOBEC3C
Alias: APOBEC1L|ARDC2|ARDC4|ARP5|PBI|bK150C2.3
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3C
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 6169 bases
Position: chr22:34222623-34228791
Accession: 103888537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000013199	APOBEC_N	PF08210.11	8.7e-58	1	1
ENSPPYP00000013199	APOBEC_C	PF05240.14	1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000013737	APOBEC3C-201	2596	XM_009234377	ENSPPYP00000013199	190 (aa)	XP_009232652	H2P4E8

Gene Model

Click here to download ENSPPYG00000011832's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000011832	APOBEC3C	93	33.152	ENSPPYG00000016586	APOBEC2	79	34.783
ENSPPYG00000011832	APOBEC3C	100	51.579	ENSPPYG00000011831	-	99	51.579
ENSPPYG00000011832	APOBEC3C	100	42.021	ENSPPYG00000011833	APOBEC3G	93	42.021
ENSPPYG00000011832	APOBEC3C	96	34.211	ENSPPYG00000011834	-	86	34.211
ENSPPYG00000011832	APOBEC3C	91	41.379	ENSPPYG00000004242	AICDA	87	41.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011832	APOBEC3C	100	77.368	ENSG00000243811	APOBEC3D	100	77.368	Homo_sapiens
ENSPPYG00000011832	APOBEC3C	100	85.263	ENSG00000244509	APOBEC3C	100	85.263	Homo_sapiens
ENSPPYG00000011832	APOBEC3C	100	75.269	ENSG00000128394	APOBEC3F	100	75.269	Homo_sapiens
ENSPPYG00000011832	APOBEC3C	100	68.421	ENSANAG00000030088	-	97	67.742	Aotus_nancymaae
ENSPPYG00000011832	APOBEC3C	69	68.939	ENSCJAG00000015317	-	100	68.939	Callithrix_jacchus
ENSPPYG00000011832	APOBEC3C	98	47.895	ENSCAFG00020002615	-	99	47.895	Canis_lupus_dingo
ENSPPYG00000011832	APOBEC3C	96	48.634	ENSTSYG00000030036	-	99	48.634	Carlito_syrichta
ENSPPYG00000011832	APOBEC3C	100	51.913	ENSTSYG00000034260	-	98	51.913	Carlito_syrichta
ENSPPYG00000011832	APOBEC3C	96	54.645	ENSTSYG00000028254	-	99	54.645	Carlito_syrichta
ENSPPYG00000011832	APOBEC3C	98	66.667	ENSCCAG00000030932	-	84	66.667	Cebus_capucinus
ENSPPYG00000011832	APOBEC3C	99	70.430	ENSCATG00000033502	-	100	70.430	Cercocebus_atys
ENSPPYG00000011832	APOBEC3C	100	80.526	ENSCATG00000043226	APOBEC3C	100	80.526	Cercocebus_atys
ENSPPYG00000011832	APOBEC3C	100	71.505	ENSCSAG00000006382	APOBEC3F	100	71.505	Chlorocebus_sabaeus
ENSPPYG00000011832	APOBEC3C	100	80.526	ENSCSAG00000006402	APOBEC3C	100	80.526	Chlorocebus_sabaeus
ENSPPYG00000011832	APOBEC3C	100	68.280	ENSCANG00000033269	-	100	68.280	Colobus_angolensis_palliatus
ENSPPYG00000011832	APOBEC3C	100	81.579	ENSCANG00000039177	APOBEC3C	100	81.579	Colobus_angolensis_palliatus
ENSPPYG00000011832	APOBEC3C	100	74.194	ENSCANG00000032904	-	100	74.194	Colobus_angolensis_palliatus
ENSPPYG00000011832	APOBEC3C	100	69.355	ENSCANG00000031957	-	100	69.355	Colobus_angolensis_palliatus
ENSPPYG00000011832	APOBEC3C	97	41.935	ENSDNOG00000044642	-	99	41.935	Dasypus_novemcinctus
ENSPPYG00000011832	APOBEC3C	100	43.627	ENSEASG00005018641	-	100	43.627	Equus_asinus_asinus
ENSPPYG00000011832	APOBEC3C	98	48.387	ENSECAG00000006071	-	100	46.774	Equus_caballus
ENSPPYG00000011832	APOBEC3C	100	75.269	ENSGGOG00000038678	APOBEC3F	100	75.269	Gorilla_gorilla
ENSPPYG00000011832	APOBEC3C	100	81.053	ENSGGOG00000036587	-	100	81.053	Gorilla_gorilla
ENSPPYG00000011832	APOBEC3C	98	45.989	ENSHGLG00000017315	-	85	45.989	Heterocephalus_glaber_female
ENSPPYG00000011832	APOBEC3C	98	45.699	ENSHGLG00100003105	-	94	45.699	Heterocephalus_glaber_male
ENSPPYG00000011832	APOBEC3C	100	70.430	ENSMFAG00000004037	APOBEC3F	100	70.430	Macaca_fascicularis
ENSPPYG00000011832	APOBEC3C	100	80.000	ENSMFAG00000016792	APOBEC3C	100	80.000	Macaca_fascicularis
ENSPPYG00000011832	APOBEC3C	100	73.656	ENSMFAG00000002331	-	100	73.656	Macaca_fascicularis
ENSPPYG00000011832	APOBEC3C	97	79.348	ENSMMUG00000004018	APOBEC3C	95	79.348	Macaca_mulatta
ENSPPYG00000011832	APOBEC3C	100	74.194	ENSMMUG00000004017	APOBEC3F	100	74.194	Macaca_mulatta
ENSPPYG00000011832	APOBEC3C	100	73.656	ENSMNEG00000043316	APOBEC3D	100	73.656	Macaca_nemestrina
ENSPPYG00000011832	APOBEC3C	100	78.947	ENSMNEG00000045196	APOBEC3C	100	78.947	Macaca_nemestrina
ENSPPYG00000011832	APOBEC3C	100	81.579	ENSMLEG00000036992	APOBEC3C	100	81.579	Mandrillus_leucophaeus
ENSPPYG00000011832	APOBEC3C	100	70.968	ENSMLEG00000029642	APOBEC3F	100	70.968	Mandrillus_leucophaeus
ENSPPYG00000011832	APOBEC3C	99	53.191	ENSMICG00000042615	-	89	53.191	Microcebus_murinus
ENSPPYG00000011832	APOBEC3C	97	45.550	ENSMLUG00000023676	-	99	45.550	Myotis_lucifugus
ENSPPYG00000011832	APOBEC3C	100	82.632	ENSNLEG00000028392	APOBEC3C	100	82.632	Nomascus_leucogenys
ENSPPYG00000011832	APOBEC3C	100	60.000	ENSNLEG00000035811	-	100	60.000	Nomascus_leucogenys
ENSPPYG00000011832	APOBEC3C	98	43.316	ENSOGAG00000030300	-	97	43.316	Otolemur_garnettii
ENSPPYG00000011832	APOBEC3C	98	44.693	ENSOGAG00000033404	-	100	44.693	Otolemur_garnettii
ENSPPYG00000011832	APOBEC3C	98	48.128	ENSOGAG00000032498	-	99	48.128	Otolemur_garnettii
ENSPPYG00000011832	APOBEC3C	100	86.316	ENSPPAG00000014118	APOBEC3C	100	86.316	Pan_paniscus
ENSPPYG00000011832	APOBEC3C	100	76.842	ENSPPAG00000028218	-	100	76.842	Pan_paniscus
ENSPPYG00000011832	APOBEC3C	97	46.237	ENSPPRG00000003726	-	98	46.237	Panthera_pardus
ENSPPYG00000011832	APOBEC3C	100	74.731	ENSPTRG00000014385	APOBEC3C	100	74.731	Pan_troglodytes
ENSPPYG00000011832	APOBEC3C	100	77.368	ENSPTRG00000041588	APOBEC3D	100	77.368	Pan_troglodytes
ENSPPYG00000011832	APOBEC3C	100	79.474	ENSPANG00000010775	APOBEC3F	100	79.474	Papio_anubis
ENSPPYG00000011832	APOBEC3C	67	55.469	ENSPCOG00000022067	-	97	55.469	Propithecus_coquereli
ENSPPYG00000011832	APOBEC3C	66	56.349	ENSPCOG00000018072	-	95	56.349	Propithecus_coquereli
ENSPPYG00000011832	APOBEC3C	65	47.967	ENSPVAG00000009461	-	50	47.967	Pteropus_vampyrus
ENSPPYG00000011832	APOBEC3C	100	80.000	ENSRBIG00000030323	-	100	80.000	Rhinopithecus_bieti
ENSPPYG00000011832	APOBEC3C	100	71.111	ENSRBIG00000042297	-	99	72.611	Rhinopithecus_bieti
ENSPPYG00000011832	APOBEC3C	100	73.118	ENSRBIG00000030834	-	100	73.118	Rhinopithecus_bieti
ENSPPYG00000011832	APOBEC3C	100	72.581	ENSRROG00000028557	-	100	72.581	Rhinopithecus_roxellana
ENSPPYG00000011832	APOBEC3C	100	80.000	ENSRROG00000029045	APOBEC3C	100	80.000	Rhinopithecus_roxellana
ENSPPYG00000011832	APOBEC3C	100	70.556	ENSRROG00000029996	-	100	70.556	Rhinopithecus_roxellana
ENSPPYG00000011832	APOBEC3C	100	68.421	ENSSBOG00000032780	-	100	68.421	Saimiri_boliviensis_boliviensis
ENSPPYG00000011832	APOBEC3C	96	46.703	ENSUAMG00000004433	-	100	46.703	Ursus_americanus
ENSPPYG00000011832	APOBEC3C	97	47.568	ENSUMAG00000014441	-	86	47.568	Ursus_maritimus
ENSPPYG00000011832	APOBEC3C	77	52.349	ENSVVUG00000014628	-	91	52.055	Vulpes_vulpes