EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000011834 (Gene tree)
Gene ID: 100458762
Gene Symbol: -
Alias: -
Full Name: DNA dC->dU-editing enzyme APOBEC-3H
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 3656 bases
Position: chr22:34293458-34297113
Accession: 100458762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000013204	APOBEC_N	PF08210.11	1.9e-35	1	1
ENSPPYP00000013204	APOBEC_C	PF05240.14	2.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000013742	-	936	XM_009234387	ENSPPYP00000013204	211 (aa)	XP_009232662	H2P4F3

Gene Model

Click here to download ENSPPYG00000011834's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011834's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000011834	-	85	33.161	ENSPPYG00000011831	-	96	33.161
ENSPPYG00000011834	-	86	34.211	ENSPPYG00000011832	APOBEC3C	96	34.211
ENSPPYG00000011834	-	85	33.862	ENSPPYG00000011833	APOBEC3G	84	33.862
ENSPPYG00000011834	-	93	33.831	ENSPPYG00000004242	AICDA	99	33.831

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011834	-	87	88.525	ENSG00000100298	APOBEC3H	100	88.525	Homo_sapiens
ENSPPYG00000011834	-	94	46.798	ENSAMEG00000010818	-	85	46.798	Ailuropoda_melanoleuca
ENSPPYG00000011834	-	94	70.297	ENSANAG00000025410	APOBEC3H	91	70.588	Aotus_nancymaae
ENSPPYG00000011834	-	94	48.889	ENSBTAG00000007755	APOBEC3H	94	48.889	Bos_taurus
ENSPPYG00000011834	-	86	70.166	ENSCJAG00000012524	APOBEC3H	90	70.166	Callithrix_jacchus
ENSPPYG00000011834	-	94	46.465	ENSCAFG00000001361	APOBEC3Z3	100	46.465	Canis_familiaris
ENSPPYG00000011834	-	95	44.500	ENSCAFG00020002584	-	92	46.703	Canis_lupus_dingo
ENSPPYG00000011834	-	94	48.333	ENSCHIG00000026580	-	96	48.333	Capra_hircus
ENSPPYG00000011834	-	84	52.247	ENSTSYG00000032894	-	100	52.247	Carlito_syrichta
ENSPPYG00000011834	-	98	51.961	ENSCPOG00000009257	-	91	52.764	Cavia_porcellus
ENSPPYG00000011834	-	94	72.637	ENSCCAG00000008525	APOBEC3H	95	73.399	Cebus_capucinus
ENSPPYG00000011834	-	86	85.635	ENSCATG00000030302	APOBEC3H	100	85.635	Cercocebus_atys
ENSPPYG00000011834	-	96	50.739	ENSCLAG00000016615	-	97	51.515	Chinchilla_lanigera
ENSPPYG00000011834	-	100	83.412	ENSCSAG00000006371	APOBEC3H	95	85.075	Chlorocebus_sabaeus
ENSPPYG00000011834	-	95	52.217	ENSCGRG00001022976	Apobec3	92	52.217	Cricetulus_griseus_chok1gshd
ENSPPYG00000011834	-	95	52.217	ENSCGRG00000005621	Apobec3	93	52.217	Cricetulus_griseus_crigri
ENSPPYG00000011834	-	85	50.811	ENSDORG00000027271	-	99	40.816	Dipodomys_ordii
ENSPPYG00000011834	-	95	50.746	ENSECAG00000007726	APOBEC3H	85	51.000	Equus_caballus
ENSPPYG00000011834	-	94	48.744	ENSFCAG00000005251	APOBEC3Z3	99	48.485	Felis_catus
ENSPPYG00000011834	-	85	53.889	ENSSTOG00000007125	-	85	53.889	Ictidomys_tridecemlineatus
ENSPPYG00000011834	-	70	50.000	ENSJJAG00000016840	-	70	50.000	Jaculus_jaculus
ENSPPYG00000011834	-	94	51.124	ENSLAFG00000027404	-	96	51.124	Loxodonta_africana
ENSPPYG00000011834	-	100	86.256	ENSMFAG00000031827	APOBEC3H	95	88.060	Macaca_fascicularis
ENSPPYG00000011834	-	100	85.308	ENSMMUG00000001016	APOBEC3H	95	87.065	Macaca_mulatta
ENSPPYG00000011834	-	100	85.782	ENSMNEG00000039259	APOBEC3H	95	87.562	Macaca_nemestrina
ENSPPYG00000011834	-	100	85.308	ENSMLEG00000033417	APOBEC3H	95	87.065	Mandrillus_leucophaeus
ENSPPYG00000011834	-	95	50.490	ENSMAUG00000011683	Apobec3	88	50.490	Mesocricetus_auratus
ENSPPYG00000011834	-	94	49.749	ENSMOCG00000021576	Apobec3	80	50.754	Microtus_ochrogaster
ENSPPYG00000011834	-	95	47.783	MGP_CAROLIEiJ_G0020029	Apobec3	93	47.783	Mus_caroli
ENSPPYG00000011834	-	96	45.854	ENSMUSG00000009585	Apobec3	97	46.392	Mus_musculus
ENSPPYG00000011834	-	99	47.115	MGP_PahariEiJ_G0020031	-	85	47.317	Mus_pahari
ENSPPYG00000011834	-	96	45.366	MGP_SPRETEiJ_G0020927	Apobec3	85	45.545	Mus_spretus
ENSPPYG00000011834	-	94	48.744	ENSMPUG00000013239	-	83	46.970	Mustela_putorius_furo
ENSPPYG00000011834	-	95	47.716	ENSNGAG00000018998	Apobec3	99	47.716	Nannospalax_galili
ENSPPYG00000011834	-	100	90.995	ENSNLEG00000015218	-	95	91.542	Nomascus_leucogenys
ENSPPYG00000011834	-	89	38.830	ENSOCUG00000023913	-	89	38.830	Oryctolagus_cuniculus
ENSPPYG00000011834	-	94	48.333	ENSOARG00000016290	APOBEC3F	97	48.333	Ovis_aries
ENSPPYG00000011834	-	87	86.885	ENSPPAG00000036522	APOBEC3H	100	86.885	Pan_paniscus
ENSPPYG00000011834	-	94	49.246	ENSPPRG00000003941	-	99	49.246	Panthera_pardus
ENSPPYG00000011834	-	72	37.736	ENSPPRG00000003675	-	81	37.736	Panthera_pardus
ENSPPYG00000011834	-	94	49.246	ENSPTIG00000010283	-	99	49.246	Panthera_tigris_altaica
ENSPPYG00000011834	-	87	86.885	ENSPTRG00000014390	APOBEC3H	100	86.885	Pan_troglodytes
ENSPPYG00000011834	-	100	84.834	ENSPANG00000010774	APOBEC3H	95	86.567	Papio_anubis
ENSPPYG00000011834	-	94	47.264	ENSPEMG00000000456	Apobec3	80	47.264	Peromyscus_maniculatus_bairdii
ENSPPYG00000011834	-	85	42.222	ENSPCAG00000015655	-	99	42.222	Procavia_capensis
ENSPPYG00000011834	-	84	52.247	ENSPVAG00000009462	-	98	52.247	Pteropus_vampyrus
ENSPPYG00000011834	-	60	33.858	ENSPVAG00000024267	-	93	33.858	Pteropus_vampyrus
ENSPPYG00000011834	-	60	34.646	ENSPVAG00000024161	-	93	34.646	Pteropus_vampyrus
ENSPPYG00000011834	-	88	48.947	ENSRNOG00000016852	Apobec3	84	48.947	Rattus_norvegicus
ENSPPYG00000011834	-	100	84.360	ENSRBIG00000029088	APOBEC3H	95	85.572	Rhinopithecus_bieti
ENSPPYG00000011834	-	100	83.886	ENSRROG00000024699	APOBEC3H	95	85.075	Rhinopithecus_roxellana
ENSPPYG00000011834	-	98	65.385	ENSSBOG00000030005	APOBEC3H	99	73.381	Saimiri_boliviensis_boliviensis
ENSPPYG00000011834	-	94	52.222	ENSSSCG00000000091	APOBEC3B	89	50.251	Sus_scrofa
ENSPPYG00000011834	-	82	51.744	ENSTBEG00000001532	-	98	51.744	Tupaia_belangeri
ENSPPYG00000011834	-	85	50.556	ENSTTRG00000001266	-	99	50.556	Tursiops_truncatus
ENSPPYG00000011834	-	85	49.198	ENSUAMG00000004427	-	83	49.198	Ursus_americanus
ENSPPYG00000011834	-	94	51.515	ENSUMAG00000014435	-	99	51.515	Ursus_maritimus
ENSPPYG00000011834	-	62	53.077	ENSVPAG00000011108	-	98	53.077	Vicugna_pacos