EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000011876 (Gene tree)
Gene ID: 100173902
Gene Symbol: XRCC6
Alias: D22S671|D22S731|G22P1|KU70|ML8
Full Name: X-ray repair cross complementing 6
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 44282 bases
Position: chr22:36887612-36931893
Accession: 4055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000013253	SAP	PF02037.27	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000013792	XRCC6-201	2078	-	ENSPPYP00000013253	555 (aa)	-	H2P4K1

Gene Model

Click here to download ENSPPYG00000011876's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03450	Non-homologous end-joining	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000011876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000011876	XRCC6	100	88.670	ENSG00000196419	XRCC6	100	88.670	Homo_sapiens
ENSPPYG00000011876	XRCC6	99	50.658	ENSAPOG00000012704	xrcc6	99	50.822	Acanthochromis_polyacanthus
ENSPPYG00000011876	XRCC6	99	50.493	ENSACIG00000021277	xrcc6	99	50.493	Amphilophus_citrinellus
ENSPPYG00000011876	XRCC6	99	49.918	ENSAOCG00000021344	xrcc6	99	50.000	Amphiprion_ocellaris
ENSPPYG00000011876	XRCC6	99	49.754	ENSAPEG00000020712	xrcc6	99	49.836	Amphiprion_percula
ENSPPYG00000011876	XRCC6	99	49.013	ENSATEG00000007119	xrcc6	99	48.684	Anabas_testudineus
ENSPPYG00000011876	XRCC6	90	63.521	ENSAPLG00000004469	XRCC6	99	63.521	Anas_platyrhynchos
ENSPPYG00000011876	XRCC6	100	88.506	ENSANAG00000018684	XRCC6	100	88.506	Aotus_nancymaae
ENSPPYG00000011876	XRCC6	100	74.104	ENSANAG00000023445	-	100	74.104	Aotus_nancymaae
ENSPPYG00000011876	XRCC6	100	80.203	ENSANAG00000035230	-	100	80.203	Aotus_nancymaae
ENSPPYG00000011876	XRCC6	100	85.836	ENSANAG00000020017	-	100	85.495	Aotus_nancymaae
ENSPPYG00000011876	XRCC6	99	50.822	ENSACLG00000018608	xrcc6	99	50.658	Astatotilapia_calliptera
ENSPPYG00000011876	XRCC6	99	51.797	ENSAMXG00000007545	xrcc6	99	51.634	Astyanax_mexicanus
ENSPPYG00000011876	XRCC6	100	88.342	ENSCJAG00000045512	XRCC6	100	88.342	Callithrix_jacchus
ENSPPYG00000011876	XRCC6	99	77.467	ENSTSYG00000011348	XRCC6	99	77.467	Carlito_syrichta
ENSPPYG00000011876	XRCC6	100	89.520	ENSCCAG00000030468	-	100	89.785	Cebus_capucinus
ENSPPYG00000011876	XRCC6	100	69.294	ENSCCAG00000035711	-	100	69.294	Cebus_capucinus
ENSPPYG00000011876	XRCC6	100	80.624	ENSCCAG00000030041	-	95	82.759	Cebus_capucinus
ENSPPYG00000011876	XRCC6	100	77.041	ENSCCAG00000037663	-	97	76.361	Cebus_capucinus
ENSPPYG00000011876	XRCC6	100	88.670	ENSCATG00000042366	XRCC6	100	88.670	Cercocebus_atys
ENSPPYG00000011876	XRCC6	99	75.947	ENSCLAG00000016669	XRCC6	99	75.947	Chinchilla_lanigera
ENSPPYG00000011876	XRCC6	100	88.670	ENSCSAG00000005784	XRCC6	100	88.670	Chlorocebus_sabaeus
ENSPPYG00000011876	XRCC6	99	65.681	ENSCPBG00000020535	XRCC6	99	65.846	Chrysemys_picta_bellii
ENSPPYG00000011876	XRCC6	94	30.703	ENSCING00000000633	-	95	30.703	Ciona_intestinalis
ENSPPYG00000011876	XRCC6	100	88.670	ENSCANG00000031032	XRCC6	100	88.670	Colobus_angolensis_palliatus
ENSPPYG00000011876	XRCC6	99	75.439	ENSCGRG00001019029	Xrcc6	99	75.263	Cricetulus_griseus_chok1gshd
ENSPPYG00000011876	XRCC6	99	74.671	ENSCGRG00000001528	Xrcc6	99	74.671	Cricetulus_griseus_crigri
ENSPPYG00000011876	XRCC6	99	49.673	ENSCSEG00000020434	xrcc6	99	49.510	Cynoglossus_semilaevis
ENSPPYG00000011876	XRCC6	99	50.082	ENSCVAG00000002189	xrcc6	99	50.082	Cyprinodon_variegatus
ENSPPYG00000011876	XRCC6	99	51.639	ENSDARG00000071551	xrcc6	99	51.967	Danio_rerio
ENSPPYG00000011876	XRCC6	69	84.328	ENSETEG00000015333	-	63	84.328	Echinops_telfairi
ENSPPYG00000011876	XRCC6	99	76.645	ENSEASG00005001514	XRCC6	99	76.974	Equus_asinus_asinus
ENSPPYG00000011876	XRCC6	99	75.987	ENSECAG00000017563	XRCC6	99	76.292	Equus_caballus
ENSPPYG00000011876	XRCC6	100	50.000	ENSELUG00000020301	xrcc6	100	49.674	Esox_lucius
ENSPPYG00000011876	XRCC6	99	63.279	ENSFALG00000011908	XRCC6	97	62.745	Ficedula_albicollis
ENSPPYG00000011876	XRCC6	99	50.980	ENSFHEG00000016833	xrcc6	99	50.817	Fundulus_heteroclitus
ENSPPYG00000011876	XRCC6	88	52.107	ENSGMOG00000013524	xrcc6	99	42.739	Gadus_morhua
ENSPPYG00000011876	XRCC6	99	61.211	ENSGALG00000011932	XRCC6	99	61.047	Gallus_gallus
ENSPPYG00000011876	XRCC6	99	48.856	ENSGAFG00000008130	xrcc6	99	48.856	Gambusia_affinis
ENSPPYG00000011876	XRCC6	99	48.361	ENSGACG00000004868	xrcc6	99	48.525	Gasterosteus_aculeatus
ENSPPYG00000011876	XRCC6	99	65.681	ENSGAGG00000017518	XRCC6	99	65.846	Gopherus_agassizii
ENSPPYG00000011876	XRCC6	100	88.670	ENSGGOG00000015885	XRCC6	100	88.670	Gorilla_gorilla
ENSPPYG00000011876	XRCC6	90	50.267	ENSHBUG00000023281	xrcc6	99	50.267	Haplochromis_burtoni
ENSPPYG00000011876	XRCC6	99	74.300	ENSHGLG00000018078	XRCC6	99	74.300	Heterocephalus_glaber_female
ENSPPYG00000011876	XRCC6	99	74.300	ENSHGLG00100011264	XRCC6	99	74.300	Heterocephalus_glaber_male
ENSPPYG00000011876	XRCC6	99	47.368	ENSHCOG00000009821	xrcc6	99	47.697	Hippocampus_comes
ENSPPYG00000011876	XRCC6	95	51.195	ENSIPUG00000000767	xrcc6	96	51.195	Ictalurus_punctatus
ENSPPYG00000011876	XRCC6	99	77.961	ENSSTOG00000009490	XRCC6	99	77.796	Ictidomys_tridecemlineatus
ENSPPYG00000011876	XRCC6	99	68.750	ENSJJAG00000017136	Xrcc6	99	69.737	Jaculus_jaculus
ENSPPYG00000011876	XRCC6	99	49.261	ENSKMAG00000002141	xrcc6	99	49.918	Kryptolebias_marmoratus
ENSPPYG00000011876	XRCC6	99	50.163	ENSLBEG00000002691	xrcc6	99	50.163	Labrus_bergylta
ENSPPYG00000011876	XRCC6	99	45.617	ENSLOCG00000011533	xrcc6	99	46.512	Lepisosteus_oculatus
ENSPPYG00000011876	XRCC6	100	88.670	ENSMFAG00000003352	XRCC6	100	88.670	Macaca_fascicularis
ENSPPYG00000011876	XRCC6	100	88.670	ENSMMUG00000001856	XRCC6	100	88.670	Macaca_mulatta
ENSPPYG00000011876	XRCC6	100	88.670	ENSMNEG00000035076	XRCC6	100	88.670	Macaca_nemestrina
ENSPPYG00000011876	XRCC6	100	88.670	ENSMLEG00000019869	XRCC6	100	88.670	Mandrillus_leucophaeus
ENSPPYG00000011876	XRCC6	94	46.575	ENSMAMG00000003405	xrcc6	96	46.575	Mastacembelus_armatus
ENSPPYG00000011876	XRCC6	99	49.180	ENSMAMG00000003368	xrcc6	99	49.344	Mastacembelus_armatus
ENSPPYG00000011876	XRCC6	99	50.822	ENSMZEG00005028080	xrcc6	99	50.658	Maylandia_zebra
ENSPPYG00000011876	XRCC6	99	60.685	ENSMGAG00000012146	XRCC6	99	60.359	Meleagris_gallopavo
ENSPPYG00000011876	XRCC6	99	74.342	ENSMAUG00000017340	Xrcc6	99	74.342	Mesocricetus_auratus
ENSPPYG00000011876	XRCC6	99	74.507	ENSMOCG00000015717	Xrcc6	99	74.671	Microtus_ochrogaster
ENSPPYG00000011876	XRCC6	99	48.933	ENSMMOG00000003536	xrcc6	99	48.768	Mola_mola
ENSPPYG00000011876	XRCC6	99	51.151	ENSMALG00000013912	xrcc6	94	50.987	Monopterus_albus
ENSPPYG00000011876	XRCC6	99	67.928	MGP_CAROLIEiJ_G0020067	Xrcc6	99	67.928	Mus_caroli
ENSPPYG00000011876	XRCC6	99	73.520	ENSMUSG00000022471	Xrcc6	99	73.520	Mus_musculus
ENSPPYG00000011876	XRCC6	99	73.026	MGP_PahariEiJ_G0020069	Xrcc6	99	73.026	Mus_pahari
ENSPPYG00000011876	XRCC6	95	73.838	MGP_SPRETEiJ_G0020967	Xrcc6	99	73.838	Mus_spretus
ENSPPYG00000011876	XRCC6	99	75.987	ENSNGAG00000013750	Xrcc6	99	73.026	Nannospalax_galili
ENSPPYG00000011876	XRCC6	99	51.151	ENSNBRG00000004125	xrcc6	99	50.987	Neolamprologus_brichardi
ENSPPYG00000011876	XRCC6	95	72.759	ENSOPRG00000002386	XRCC6	99	72.759	Ochotona_princeps
ENSPPYG00000011876	XRCC6	99	72.652	ENSODEG00000015847	XRCC6	99	72.817	Octodon_degus
ENSPPYG00000011876	XRCC6	99	50.571	ENSONIG00000019715	xrcc6	99	51.151	Oreochromis_niloticus
ENSPPYG00000011876	XRCC6	65	65.777	ENSOANG00000011328	XRCC6	99	65.777	Ornithorhynchus_anatinus
ENSPPYG00000011876	XRCC6	100	77.176	ENSOCUG00000006948	XRCC6	100	77.504	Oryctolagus_cuniculus
ENSPPYG00000011876	XRCC6	99	50.082	ENSORLG00020007820	xrcc6	99	50.082	Oryzias_latipes_hni
ENSPPYG00000011876	XRCC6	99	50.000	ENSORLG00015006406	xrcc6	99	49.755	Oryzias_latipes_hsok
ENSPPYG00000011876	XRCC6	99	49.266	ENSOMEG00000008998	xrcc6	99	49.266	Oryzias_melastigma
ENSPPYG00000011876	XRCC6	99	77.303	ENSOGAG00000008821	XRCC6	99	77.138	Otolemur_garnettii
ENSPPYG00000011876	XRCC6	91	98.469	ENSPPAG00000037167	XRCC6	100	98.469	Pan_paniscus
ENSPPYG00000011876	XRCC6	100	88.670	ENSPTRG00000022548	XRCC6	100	88.670	Pan_troglodytes
ENSPPYG00000011876	XRCC6	100	88.670	ENSPTRG00000045824	XRCC6	100	88.670	Pan_troglodytes
ENSPPYG00000011876	XRCC6	100	88.506	ENSPANG00000001252	XRCC6	100	88.506	Papio_anubis
ENSPPYG00000011876	XRCC6	99	59.928	ENSPKIG00000003974	xrcc6	99	59.928	Paramormyrops_kingsleyae
ENSPPYG00000011876	XRCC6	99	49.751	ENSPMGG00000014220	xrcc6	100	49.917	Periophthalmus_magnuspinnatus
ENSPPYG00000011876	XRCC6	99	73.355	ENSPEMG00000023446	Xrcc6	99	73.355	Peromyscus_maniculatus_bairdii
ENSPPYG00000011876	XRCC6	100	68.197	ENSPCIG00000026409	XRCC6	99	68.197	Phascolarctos_cinereus
ENSPPYG00000011876	XRCC6	99	49.183	ENSPFOG00000017173	xrcc6	99	49.020	Poecilia_formosa
ENSPPYG00000011876	XRCC6	99	48.856	ENSPLAG00000000562	xrcc6	99	48.693	Poecilia_latipinna
ENSPPYG00000011876	XRCC6	99	49.346	ENSPMEG00000018478	xrcc6	99	49.183	Poecilia_mexicana
ENSPPYG00000011876	XRCC6	99	49.349	ENSPREG00000020957	xrcc6	93	49.186	Poecilia_reticulata
ENSPPYG00000011876	XRCC6	99	74.836	ENSPVAG00000001168	XRCC6	99	74.507	Pteropus_vampyrus
ENSPPYG00000011876	XRCC6	99	50.822	ENSPNYG00000003815	xrcc6	99	48.200	Pundamilia_nyererei
ENSPPYG00000011876	XRCC6	99	73.520	ENSRNOG00000006392	Xrcc6	99	73.520	Rattus_norvegicus
ENSPPYG00000011876	XRCC6	100	81.938	ENSRBIG00000039794	XRCC6	100	81.938	Rhinopithecus_bieti
ENSPPYG00000011876	XRCC6	100	88.670	ENSRROG00000030297	XRCC6	100	88.670	Rhinopithecus_roxellana
ENSPPYG00000011876	XRCC6	64	83.106	ENSSBOG00000024724	-	100	83.106	Saimiri_boliviensis_boliviensis
ENSPPYG00000011876	XRCC6	99	68.801	ENSSHAG00000010790	XRCC6	99	68.473	Sarcophilus_harrisii
ENSPPYG00000011876	XRCC6	99	54.426	ENSSFOG00015014409	xrcc6	99	54.262	Scleropages_formosus
ENSPPYG00000011876	XRCC6	99	51.316	ENSSMAG00000006496	xrcc6	99	50.658	Scophthalmus_maximus
ENSPPYG00000011876	XRCC6	99	49.183	ENSSDUG00000007542	xrcc6	99	49.020	Seriola_dumerili
ENSPPYG00000011876	XRCC6	99	48.366	ENSSLDG00000009974	xrcc6	99	48.203	Seriola_lalandi_dorsalis
ENSPPYG00000011876	XRCC6	99	66.174	ENSSPUG00000012086	XRCC6	99	65.954	Sphenodon_punctatus
ENSPPYG00000011876	XRCC6	99	50.654	ENSSPAG00000015199	xrcc6	99	50.490	Stegastes_partitus
ENSPPYG00000011876	XRCC6	95	64.605	ENSTGUG00000009852	-	95	63.574	Taeniopygia_guttata
ENSPPYG00000011876	XRCC6	99	58.757	ENSTRUG00000017070	xrcc6	91	58.757	Takifugu_rubripes
ENSPPYG00000011876	XRCC6	94	61.111	ENSTNIG00000012947	xrcc6	89	61.111	Tetraodon_nigroviridis
ENSPPYG00000011876	XRCC6	95	68.330	ENSTBEG00000011736	XRCC6	99	68.330	Tupaia_belangeri
ENSPPYG00000011876	XRCC6	82	85.075	ENSTTRG00000006749	XRCC6	74	85.625	Tursiops_truncatus
ENSPPYG00000011876	XRCC6	99	49.510	ENSXMAG00000009691	xrcc6	99	49.346	Xiphophorus_maculatus