EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000012444 (Gene tree)
Gene ID: 100174303
Gene Symbol: SRBD1
Alias: FLJ10379
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 234598 bases
Position: chr2a:65762131-65996728
Accession: 25521
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000013898	S1	PF00575.23	2.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000014461	SRBD1-201	4064	-	ENSPPYP00000013898	1067 (aa)	-	H2P6C4

Gene Model

Click here to download ENSPPYG00000012444's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000012444's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000012444	SRBD1	99	90.047	ENSG00000068784	SRBD1	100	90.047	Homo_sapiens
ENSPPYG00000012444	SRBD1	99	47.545	ENSAPOG00000005103	si:ch211-117n7.8	94	49.904	Acanthochromis_polyacanthus
ENSPPYG00000012444	SRBD1	99	83.507	ENSAMEG00000005993	SRBD1	100	83.507	Ailuropoda_melanoleuca
ENSPPYG00000012444	SRBD1	83	53.274	ENSACIG00000009875	si:ch211-117n7.8	97	49.567	Amphilophus_citrinellus
ENSPPYG00000012444	SRBD1	97	48.641	ENSAOCG00000024718	si:ch211-117n7.8	84	53.473	Amphiprion_ocellaris
ENSPPYG00000012444	SRBD1	83	53.524	ENSAPEG00000002645	si:ch211-117n7.8	87	53.634	Amphiprion_percula
ENSPPYG00000012444	SRBD1	97	49.105	ENSATEG00000010844	si:ch211-117n7.8	97	49.146	Anabas_testudineus
ENSPPYG00000012444	SRBD1	99	64.628	ENSAPLG00000006313	SRBD1	100	64.722	Anas_platyrhynchos
ENSPPYG00000012444	SRBD1	99	86.635	ENSANAG00000025573	SRBD1	100	86.635	Aotus_nancymaae
ENSPPYG00000012444	SRBD1	98	47.161	ENSACLG00000024219	si:ch211-117n7.8	94	49.179	Astatotilapia_calliptera
ENSPPYG00000012444	SRBD1	87	55.091	ENSAMXG00000004294	SRBD1	93	52.465	Astyanax_mexicanus
ENSPPYG00000012444	SRBD1	99	79.945	ENSBTAG00000007508	SRBD1	99	80.591	Bos_taurus
ENSPPYG00000012444	SRBD1	99	86.066	ENSCJAG00000000727	SRBD1	100	86.066	Callithrix_jacchus
ENSPPYG00000012444	SRBD1	99	82.876	ENSCAFG00000002554	SRBD1	100	82.876	Canis_familiaris
ENSPPYG00000012444	SRBD1	94	89.071	ENSCAFG00020026284	SRBD1	98	89.071	Canis_lupus_dingo
ENSPPYG00000012444	SRBD1	100	81.086	ENSCHIG00000016535	SRBD1	99	81.742	Capra_hircus
ENSPPYG00000012444	SRBD1	99	83.743	ENSTSYG00000012797	SRBD1	100	83.837	Carlito_syrichta
ENSPPYG00000012444	SRBD1	99	80.019	ENSCPOG00000004773	SRBD1	100	80.587	Cavia_porcellus
ENSPPYG00000012444	SRBD1	99	86.635	ENSCCAG00000025589	SRBD1	100	86.635	Cebus_capucinus
ENSPPYG00000012444	SRBD1	99	89.194	ENSCATG00000039530	SRBD1	100	89.194	Cercocebus_atys
ENSPPYG00000012444	SRBD1	99	81.474	ENSCLAG00000008623	SRBD1	100	81.474	Chinchilla_lanigera
ENSPPYG00000012444	SRBD1	99	89.668	ENSCSAG00000013350	SRBD1	100	89.668	Chlorocebus_sabaeus
ENSPPYG00000012444	SRBD1	87	76.489	ENSCHOG00000003805	SRBD1	93	76.489	Choloepus_hoffmanni
ENSPPYG00000012444	SRBD1	99	67.358	ENSCPBG00000005677	SRBD1	100	67.045	Chrysemys_picta_bellii
ENSPPYG00000012444	SRBD1	75	44.118	ENSCING00000005950	-	99	44.118	Ciona_intestinalis
ENSPPYG00000012444	SRBD1	80	37.588	ENSCSAVG00000000861	-	99	37.588	Ciona_savignyi
ENSPPYG00000012444	SRBD1	99	88.984	ENSCANG00000016307	SRBD1	99	88.984	Colobus_angolensis_palliatus
ENSPPYG00000012444	SRBD1	99	77.694	ENSCGRG00001000513	Srbd1	100	77.694	Cricetulus_griseus_chok1gshd
ENSPPYG00000012444	SRBD1	99	77.694	ENSCGRG00000002283	Srbd1	100	77.694	Cricetulus_griseus_crigri
ENSPPYG00000012444	SRBD1	96	48.338	ENSCSEG00000000856	si:ch211-117n7.8	97	48.473	Cynoglossus_semilaevis
ENSPPYG00000012444	SRBD1	83	52.747	ENSCVAG00000020212	si:ch211-117n7.8	97	50.101	Cyprinodon_variegatus
ENSPPYG00000012444	SRBD1	99	82.436	ENSDNOG00000018686	SRBD1	100	82.436	Dasypus_novemcinctus
ENSPPYG00000012444	SRBD1	93	90.351	ENSDORG00000010468	Srbd1	100	90.351	Dipodomys_ordii
ENSPPYG00000012444	SRBD1	93	30.067	FBgn0051156	CG31156	98	32.286	Drosophila_melanogaster
ENSPPYG00000012444	SRBD1	80	94.709	ENSETEG00000000739	SRBD1	88	94.709	Echinops_telfairi
ENSPPYG00000012444	SRBD1	73	41.960	ENSEBUG00000008902	si:ch211-117n7.8	96	41.960	Eptatretus_burgeri
ENSPPYG00000012444	SRBD1	99	81.155	ENSEASG00005003132	SRBD1	99	94.461	Equus_asinus_asinus
ENSPPYG00000012444	SRBD1	100	83.708	ENSECAG00000013865	SRBD1	99	83.708	Equus_caballus
ENSPPYG00000012444	SRBD1	96	51.536	ENSELUG00000012592	si:ch211-117n7.8	92	51.631	Esox_lucius
ENSPPYG00000012444	SRBD1	99	83.807	ENSFCAG00000005101	SRBD1	100	83.807	Felis_catus
ENSPPYG00000012444	SRBD1	99	62.523	ENSFALG00000012966	SRBD1	100	59.643	Ficedula_albicollis
ENSPPYG00000012444	SRBD1	98	78.927	ENSFDAG00000016670	SRBD1	98	79.746	Fukomys_damarensis
ENSPPYG00000012444	SRBD1	83	53.524	ENSFHEG00000019480	si:ch211-117n7.8	82	53.634	Fundulus_heteroclitus
ENSPPYG00000012444	SRBD1	99	64.461	ENSGALG00000009990	SRBD1	100	64.117	Gallus_gallus
ENSPPYG00000012444	SRBD1	88	50.729	ENSGAFG00000019664	si:ch211-117n7.8	97	47.859	Gambusia_affinis
ENSPPYG00000012444	SRBD1	64	53.226	ENSGACG00000010794	si:ch211-117n7.8	100	53.519	Gasterosteus_aculeatus
ENSPPYG00000012444	SRBD1	85	71.854	ENSGAGG00000006166	SRBD1	99	73.596	Gopherus_agassizii
ENSPPYG00000012444	SRBD1	96	90.087	ENSGGOG00000005910	SRBD1	100	90.078	Gorilla_gorilla
ENSPPYG00000012444	SRBD1	88	44.620	ENSHBUG00000013207	si:ch211-117n7.8	99	42.761	Haplochromis_burtoni
ENSPPYG00000012444	SRBD1	99	80.912	ENSHGLG00000018153	-	99	81.007	Heterocephalus_glaber_female
ENSPPYG00000012444	SRBD1	99	80.817	ENSHGLG00100015183	-	99	80.817	Heterocephalus_glaber_male
ENSPPYG00000012444	SRBD1	85	56.360	ENSIPUG00000009661	srbd1	95	52.473	Ictalurus_punctatus
ENSPPYG00000012444	SRBD1	99	83.318	ENSSTOG00000005898	SRBD1	100	83.318	Ictidomys_tridecemlineatus
ENSPPYG00000012444	SRBD1	99	74.386	ENSJJAG00000022244	Srbd1	100	74.386	Jaculus_jaculus
ENSPPYG00000012444	SRBD1	97	48.496	ENSKMAG00000003473	si:ch211-117n7.8	86	51.695	Kryptolebias_marmoratus
ENSPPYG00000012444	SRBD1	97	48.926	ENSLBEG00000027518	si:ch211-117n7.8	97	48.870	Labrus_bergylta
ENSPPYG00000012444	SRBD1	85	61.080	ENSLACG00000009790	SRBD1	100	61.080	Latimeria_chalumnae
ENSPPYG00000012444	SRBD1	99	53.903	ENSLOCG00000016360	si:ch211-117n7.8	99	53.996	Lepisosteus_oculatus
ENSPPYG00000012444	SRBD1	99	89.668	ENSMFAG00000042026	SRBD1	100	89.668	Macaca_fascicularis
ENSPPYG00000012444	SRBD1	99	89.479	ENSMMUG00000003490	SRBD1	100	89.479	Macaca_mulatta
ENSPPYG00000012444	SRBD1	97	93.130	ENSMNEG00000034701	SRBD1	100	93.130	Macaca_nemestrina
ENSPPYG00000012444	SRBD1	99	89.289	ENSMLEG00000000745	SRBD1	100	89.289	Mandrillus_leucophaeus
ENSPPYG00000012444	SRBD1	82	52.242	ENSMAMG00000021921	si:ch211-117n7.8	87	51.170	Mastacembelus_armatus
ENSPPYG00000012444	SRBD1	98	47.161	ENSMZEG00005027369	si:ch211-117n7.8	94	49.179	Maylandia_zebra
ENSPPYG00000012444	SRBD1	80	67.832	ENSMGAG00000010273	SRBD1	100	67.832	Meleagris_gallopavo
ENSPPYG00000012444	SRBD1	79	81.183	ENSMAUG00000013916	Srbd1	99	78.360	Mesocricetus_auratus
ENSPPYG00000012444	SRBD1	99	84.848	ENSMICG00000007835	SRBD1	100	84.848	Microcebus_murinus
ENSPPYG00000012444	SRBD1	99	77.316	ENSMOCG00000018716	Srbd1	100	77.316	Microtus_ochrogaster
ENSPPYG00000012444	SRBD1	84	52.031	ENSMMOG00000007507	si:ch211-117n7.8	87	52.141	Mola_mola
ENSPPYG00000012444	SRBD1	99	47.484	ENSMALG00000001562	si:ch211-117n7.8	86	51.702	Monopterus_albus
ENSPPYG00000012444	SRBD1	99	72.538	MGP_CAROLIEiJ_G0021934	Srbd1	99	85.304	Mus_caroli
ENSPPYG00000012444	SRBD1	99	75.355	ENSMUSG00000024135	Srbd1	99	84.184	Mus_musculus
ENSPPYG00000012444	SRBD1	99	72.064	MGP_PahariEiJ_G0020924	Srbd1	100	72.064	Mus_pahari
ENSPPYG00000012444	SRBD1	99	72.538	MGP_SPRETEiJ_G0022850	Srbd1	100	72.538	Mus_spretus
ENSPPYG00000012444	SRBD1	99	80.303	ENSMLUG00000007039	SRBD1	100	80.303	Myotis_lucifugus
ENSPPYG00000012444	SRBD1	99	78.713	ENSNGAG00000011893	Srbd1	100	78.335	Nannospalax_galili
ENSPPYG00000012444	SRBD1	88	49.477	ENSNBRG00000012873	si:ch211-117n7.8	96	47.902	Neolamprologus_brichardi
ENSPPYG00000012444	SRBD1	99	90.521	ENSNLEG00000016877	SRBD1	100	90.521	Nomascus_leucogenys
ENSPPYG00000012444	SRBD1	99	78.977	ENSODEG00000012095	SRBD1	100	78.977	Octodon_degus
ENSPPYG00000012444	SRBD1	98	47.527	ENSONIG00000000945	si:ch211-117n7.8	100	54.087	Oreochromis_niloticus
ENSPPYG00000012444	SRBD1	99	83.239	ENSOCUG00000015385	SRBD1	100	83.807	Oryctolagus_cuniculus
ENSPPYG00000012444	SRBD1	85	49.517	ENSORLG00000004427	si:ch211-117n7.8	84	49.624	Oryzias_latipes
ENSPPYG00000012444	SRBD1	85	52.039	ENSORLG00020012792	si:ch211-117n7.8	84	52.468	Oryzias_latipes_hni
ENSPPYG00000012444	SRBD1	83	52.585	ENSORLG00015018598	si:ch211-117n7.8	82	52.695	Oryzias_latipes_hsok
ENSPPYG00000012444	SRBD1	85	51.188	ENSOMEG00000012229	si:ch211-117n7.8	81	54.255	Oryzias_melastigma
ENSPPYG00000012444	SRBD1	99	78.125	ENSOGAG00000001076	SRBD1	100	78.125	Otolemur_garnettii
ENSPPYG00000012444	SRBD1	99	80.170	ENSOARG00000005958	SRBD1	100	80.831	Ovis_aries
ENSPPYG00000012444	SRBD1	99	90.332	ENSPPAG00000038442	SRBD1	100	90.332	Pan_paniscus
ENSPPYG00000012444	SRBD1	99	83.791	ENSPPRG00000003449	SRBD1	100	83.791	Panthera_pardus
ENSPPYG00000012444	SRBD1	99	83.886	ENSPTIG00000012495	SRBD1	100	83.886	Panthera_tigris_altaica
ENSPPYG00000012444	SRBD1	99	90.332	ENSPTRG00000011889	SRBD1	100	90.332	Pan_troglodytes
ENSPPYG00000012444	SRBD1	99	89.384	ENSPANG00000008063	SRBD1	100	89.384	Papio_anubis
ENSPPYG00000012444	SRBD1	95	51.325	ENSPKIG00000021973	si:ch211-117n7.8	97	51.270	Paramormyrops_kingsleyae
ENSPPYG00000012444	SRBD1	99	67.045	ENSPSIG00000008992	SRBD1	100	67.235	Pelodiscus_sinensis
ENSPPYG00000012444	SRBD1	89	49.231	ENSPMGG00000013348	si:ch211-117n7.8	98	47.583	Periophthalmus_magnuspinnatus
ENSPPYG00000012444	SRBD1	99	78.072	ENSPEMG00000020684	Srbd1	100	78.072	Peromyscus_maniculatus_bairdii
ENSPPYG00000012444	SRBD1	97	48.082	ENSPFOG00000010650	si:ch211-117n7.8	88	51.146	Poecilia_formosa
ENSPPYG00000012444	SRBD1	97	48.363	ENSPLAG00000002141	si:ch211-117n7.8	97	48.718	Poecilia_latipinna
ENSPPYG00000012444	SRBD1	97	48.176	ENSPMEG00000018537	si:ch211-117n7.8	97	48.528	Poecilia_mexicana
ENSPPYG00000012444	SRBD1	85	52.643	ENSPREG00000003258	si:ch211-117n7.8	87	52.751	Poecilia_reticulata
ENSPPYG00000012444	SRBD1	73	86.624	ENSPCAG00000005629	SRBD1	82	86.624	Procavia_capensis
ENSPPYG00000012444	SRBD1	99	73.182	ENSPCOG00000017669	SRBD1	100	73.182	Propithecus_coquereli
ENSPPYG00000012444	SRBD1	91	92.628	ENSPVAG00000001782	SRBD1	97	92.628	Pteropus_vampyrus
ENSPPYG00000012444	SRBD1	88	48.004	ENSPNYG00000000508	si:ch211-117n7.8	96	46.523	Pundamilia_nyererei
ENSPPYG00000012444	SRBD1	96	53.165	ENSPNAG00000013492	SRBD1	95	53.262	Pygocentrus_nattereri
ENSPPYG00000012444	SRBD1	99	70.766	ENSRNOG00000014720	Srbd1	99	71.996	Rattus_norvegicus
ENSPPYG00000012444	SRBD1	99	89.079	ENSRBIG00000033486	SRBD1	99	89.079	Rhinopithecus_bieti
ENSPPYG00000012444	SRBD1	99	89.079	ENSRROG00000041599	SRBD1	99	89.079	Rhinopithecus_roxellana
ENSPPYG00000012444	SRBD1	99	86.730	ENSSBOG00000024982	SRBD1	100	86.730	Saimiri_boliviensis_boliviensis
ENSPPYG00000012444	SRBD1	94	51.670	ENSSFOG00015001128	si:ch211-117n7.8	99	51.768	Scleropages_formosus
ENSPPYG00000012444	SRBD1	97	48.330	ENSSMAG00000018256	si:ch211-117n7.8	85	52.114	Scophthalmus_maximus
ENSPPYG00000012444	SRBD1	95	48.706	ENSSLDG00000023189	si:ch211-117n7.8	96	49.089	Seriola_lalandi_dorsalis
ENSPPYG00000012444	SRBD1	99	71.754	ENSSARG00000009740	SRBD1	100	71.754	Sorex_araneus
ENSPPYG00000012444	SRBD1	88	69.174	ENSSPUG00000010475	SRBD1	98	69.703	Sphenodon_punctatus
ENSPPYG00000012444	SRBD1	87	49.894	ENSSPAG00000008092	-	95	48.073	Stegastes_partitus
ENSPPYG00000012444	SRBD1	96	86.975	ENSSSCG00000008445	SRBD1	99	86.975	Sus_scrofa
ENSPPYG00000012444	SRBD1	83	69.888	ENSTGUG00000003878	SRBD1	100	69.888	Taeniopygia_guttata
ENSPPYG00000012444	SRBD1	99	45.943	ENSTRUG00000007080	si:ch211-117n7.8	96	50.053	Takifugu_rubripes
ENSPPYG00000012444	SRBD1	98	45.379	ENSTNIG00000007464	si:ch211-117n7.8	99	45.051	Tetraodon_nigroviridis
ENSPPYG00000012444	SRBD1	74	98.485	ENSTBEG00000004556	SRBD1	80	98.485	Tupaia_belangeri
ENSPPYG00000012444	SRBD1	93	91.705	ENSTTRG00000011871	SRBD1	94	91.705	Tursiops_truncatus
ENSPPYG00000012444	SRBD1	95	87.395	ENSUAMG00000008126	SRBD1	97	94.928	Ursus_americanus
ENSPPYG00000012444	SRBD1	100	82.959	ENSUMAG00000012902	SRBD1	99	82.865	Ursus_maritimus
ENSPPYG00000012444	SRBD1	91	83.454	ENSVPAG00000006825	SRBD1	100	83.454	Vicugna_pacos
ENSPPYG00000012444	SRBD1	93	94.304	ENSVVUG00000005389	SRBD1	99	94.304	Vulpes_vulpes
ENSPPYG00000012444	SRBD1	99	52.239	ENSXETG00000002760	srbd1	100	52.186	Xenopus_tropicalis
ENSPPYG00000012444	SRBD1	97	47.610	ENSXMAG00000016861	si:ch211-117n7.8	88	50.938	Xiphophorus_maculatus