EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000012815 (Gene tree)
Gene ID: -
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 122975 bases
Position: chr2b:24543820-24666794
Accession: 9757
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000014300	R3H	PF01424.22	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000014882	R3HDM1-201	4321	-	ENSPPYP00000014300	1100 (aa)	-	H2P7F6

Gene Model

Click here to download ENSPPYG00000012815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000012815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000012815	R3HDM1	97	46.774	ENSPPYG00000004685	R3HDM2	77	54.479
ENSPPYG00000012815	R3HDM1	67	49.446	ENSPPYG00000014027	ARPP21	60	55.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000012815	R3HDM1	100	98.364	ENSG00000048991	R3HDM1	99	100.000	Homo_sapiens
ENSPPYG00000012815	R3HDM1	100	94.203	ENSAMEG00000014886	R3HDM1	100	94.293	Ailuropoda_melanoleuca
ENSPPYG00000012815	R3HDM1	89	46.196	ENSAOCG00000005192	r3hdm1	99	45.556	Amphiprion_ocellaris
ENSPPYG00000012815	R3HDM1	89	45.627	ENSAPEG00000016108	r3hdm1	99	45.236	Amphiprion_percula
ENSPPYG00000012815	R3HDM1	89	44.785	ENSATEG00000000232	r3hdm1	92	53.640	Anabas_testudineus
ENSPPYG00000012815	R3HDM1	100	77.978	ENSAPLG00000015231	R3HDM1	100	78.249	Anas_platyrhynchos
ENSPPYG00000012815	R3HDM1	100	75.699	ENSACAG00000001676	R3HDM1	100	76.224	Anolis_carolinensis
ENSPPYG00000012815	R3HDM1	100	97.005	ENSANAG00000035334	R3HDM1	100	97.059	Aotus_nancymaae
ENSPPYG00000012815	R3HDM1	79	49.030	ENSACLG00000027282	r3hdm1	94	47.609	Astatotilapia_calliptera
ENSPPYG00000012815	R3HDM1	100	55.247	ENSAMXG00000003536	r3hdm1	100	60.789	Astyanax_mexicanus
ENSPPYG00000012815	R3HDM1	93	70.096	ENSAMXG00000012861	R3HDM1	100	59.649	Astyanax_mexicanus
ENSPPYG00000012815	R3HDM1	100	89.016	ENSBTAG00000013302	R3HDM1	100	89.719	Bos_taurus
ENSPPYG00000012815	R3HDM1	100	96.821	ENSCJAG00000011718	R3HDM1	100	96.821	Callithrix_jacchus
ENSPPYG00000012815	R3HDM1	100	94.384	ENSCAFG00000005075	R3HDM1	100	94.475	Canis_familiaris
ENSPPYG00000012815	R3HDM1	100	94.470	ENSCAFG00020016119	R3HDM1	100	94.560	Canis_lupus_dingo
ENSPPYG00000012815	R3HDM1	100	91.938	ENSCHIG00000020851	R3HDM1	100	92.301	Capra_hircus
ENSPPYG00000012815	R3HDM1	100	87.972	ENSCPOG00000012784	R3HDM1	100	88.060	Cavia_porcellus
ENSPPYG00000012815	R3HDM1	100	96.818	ENSCCAG00000027199	R3HDM1	100	97.054	Cebus_capucinus
ENSPPYG00000012815	R3HDM1	100	97.548	ENSCATG00000023642	R3HDM1	100	97.709	Cercocebus_atys
ENSPPYG00000012815	R3HDM1	100	87.610	ENSCLAG00000007962	R3HDM1	100	87.434	Chinchilla_lanigera
ENSPPYG00000012815	R3HDM1	100	94.626	ENSCSAG00000016356	R3HDM1	100	94.449	Chlorocebus_sabaeus
ENSPPYG00000012815	R3HDM1	87	82.305	ENSCHOG00000013638	R3HDM1	91	82.442	Choloepus_hoffmanni
ENSPPYG00000012815	R3HDM1	88	79.548	ENSCPBG00000009645	R3HDM1	100	79.137	Chrysemys_picta_bellii
ENSPPYG00000012815	R3HDM1	100	97.368	ENSCANG00000034748	R3HDM1	100	97.549	Colobus_angolensis_palliatus
ENSPPYG00000012815	R3HDM1	99	86.304	ENSCGRG00001012357	R3hdm1	97	87.213	Cricetulus_griseus_chok1gshd
ENSPPYG00000012815	R3HDM1	99	90.091	ENSCGRG00000012080	R3hdm1	100	87.170	Cricetulus_griseus_crigri
ENSPPYG00000012815	R3HDM1	89	42.816	ENSCSEG00000008944	r3hdm1	99	43.674	Cynoglossus_semilaevis
ENSPPYG00000012815	R3HDM1	89	47.725	ENSCVAG00000007582	r3hdm1	99	46.951	Cyprinodon_variegatus
ENSPPYG00000012815	R3HDM1	64	34.312	ENSDARG00000061081	arpp21	52	45.308	Danio_rerio
ENSPPYG00000012815	R3HDM1	100	89.550	ENSDNOG00000000771	R3HDM1	100	89.640	Dasypus_novemcinctus
ENSPPYG00000012815	R3HDM1	100	82.593	ENSETEG00000013606	R3HDM1	100	82.774	Echinops_telfairi
ENSPPYG00000012815	R3HDM1	66	41.534	ENSEBUG00000014746	arpp21	97	42.683	Eptatretus_burgeri
ENSPPYG00000012815	R3HDM1	100	93.291	ENSEASG00005007392	R3HDM1	100	94.016	Equus_asinus_asinus
ENSPPYG00000012815	R3HDM1	100	93.563	ENSECAG00000019114	R3HDM1	100	94.288	Equus_caballus
ENSPPYG00000012815	R3HDM1	91	84.871	ENSEEUG00000012589	R3HDM1	91	84.871	Erinaceus_europaeus
ENSPPYG00000012815	R3HDM1	93	49.508	ENSELUG00000014413	r3hdm1	96	51.887	Esox_lucius
ENSPPYG00000012815	R3HDM1	94	55.319	ENSELUG00000004909	R3HDM1	99	54.851	Esox_lucius
ENSPPYG00000012815	R3HDM1	100	93.841	ENSFCAG00000027113	R3HDM1	100	93.931	Felis_catus
ENSPPYG00000012815	R3HDM1	75	71.860	ENSFALG00000013731	R3HDM1	93	58.730	Ficedula_albicollis
ENSPPYG00000012815	R3HDM1	100	87.621	ENSFDAG00000016478	R3HDM1	100	87.533	Fukomys_damarensis
ENSPPYG00000012815	R3HDM1	89	45.767	ENSFHEG00000018713	r3hdm1	100	46.769	Fundulus_heteroclitus
ENSPPYG00000012815	R3HDM1	57	62.473	ENSGMOG00000006042	-	74	62.907	Gadus_morhua
ENSPPYG00000012815	R3HDM1	83	84.039	ENSGALG00000012246	R3HDM1	99	83.987	Gallus_gallus
ENSPPYG00000012815	R3HDM1	79	48.009	ENSGAFG00000006203	r3hdm1	94	48.152	Gambusia_affinis
ENSPPYG00000012815	R3HDM1	87	46.981	ENSGACG00000014925	r3hdm1	99	46.756	Gasterosteus_aculeatus
ENSPPYG00000012815	R3HDM1	100	77.939	ENSGAGG00000007840	R3HDM1	100	77.667	Gopherus_agassizii
ENSPPYG00000012815	R3HDM1	100	98.093	ENSGGOG00000008156	R3HDM1	100	98.363	Gorilla_gorilla
ENSPPYG00000012815	R3HDM1	100	87.863	ENSHGLG00000015718	R3HDM1	100	87.863	Heterocephalus_glaber_female
ENSPPYG00000012815	R3HDM1	100	87.951	ENSHGLG00100003184	-	100	87.599	Heterocephalus_glaber_male
ENSPPYG00000012815	R3HDM1	100	68.478	ENSHGLG00100015374	-	100	72.866	Heterocephalus_glaber_male
ENSPPYG00000012815	R3HDM1	79	44.372	ENSHCOG00000013366	r3hdm1	88	58.354	Hippocampus_comes
ENSPPYG00000012815	R3HDM1	91	53.713	ENSIPUG00000013629	r3hdm1	95	52.611	Ictalurus_punctatus
ENSPPYG00000012815	R3HDM1	89	56.250	ENSIPUG00000001676	R3HDM1	99	55.941	Ictalurus_punctatus
ENSPPYG00000012815	R3HDM1	100	94.011	ENSSTOG00000007572	R3HDM1	100	94.011	Ictidomys_tridecemlineatus
ENSPPYG00000012815	R3HDM1	95	70.145	ENSLACG00000005334	R3HDM1	100	70.145	Latimeria_chalumnae
ENSPPYG00000012815	R3HDM1	100	66.018	ENSLOCG00000001641	r3hdm1	100	65.956	Lepisosteus_oculatus
ENSPPYG00000012815	R3HDM1	100	89.798	ENSLAFG00000009065	R3HDM1	100	90.501	Loxodonta_africana
ENSPPYG00000012815	R3HDM1	100	97.729	ENSMFAG00000030331	R3HDM1	100	97.729	Macaca_fascicularis
ENSPPYG00000012815	R3HDM1	100	97.727	ENSMMUG00000009844	R3HDM1	100	97.727	Macaca_mulatta
ENSPPYG00000012815	R3HDM1	100	97.636	ENSMNEG00000027793	R3HDM1	100	97.636	Macaca_nemestrina
ENSPPYG00000012815	R3HDM1	100	97.820	ENSMLEG00000043189	R3HDM1	100	97.872	Mandrillus_leucophaeus
ENSPPYG00000012815	R3HDM1	89	47.751	ENSMAMG00000004532	r3hdm1	92	57.744	Mastacembelus_armatus
ENSPPYG00000012815	R3HDM1	89	47.830	ENSMZEG00005003157	r3hdm1	92	56.952	Maylandia_zebra
ENSPPYG00000012815	R3HDM1	100	77.527	ENSMGAG00000012461	R3HDM1	100	77.708	Meleagris_gallopavo
ENSPPYG00000012815	R3HDM1	100	85.864	ENSMAUG00000010315	R3hdm1	100	87.117	Mesocricetus_auratus
ENSPPYG00000012815	R3HDM1	96	69.924	ENSMICG00000042655	-	100	89.520	Microcebus_murinus
ENSPPYG00000012815	R3HDM1	100	93.032	ENSMICG00000005900	-	100	93.032	Microcebus_murinus
ENSPPYG00000012815	R3HDM1	90	76.353	ENSMODG00000000923	R3HDM1	97	76.543	Monodelphis_domestica
ENSPPYG00000012815	R3HDM1	99	45.628	ENSMALG00000009000	r3hdm1	100	45.667	Monopterus_albus
ENSPPYG00000012815	R3HDM1	100	85.552	MGP_CAROLIEiJ_G0014543	R3hdm1	100	86.719	Mus_caroli
ENSPPYG00000012815	R3HDM1	100	85.552	ENSMUSG00000056211	R3hdm1	100	86.719	Mus_musculus
ENSPPYG00000012815	R3HDM1	100	85.464	MGP_PahariEiJ_G0027779	R3hdm1	100	86.544	Mus_pahari
ENSPPYG00000012815	R3HDM1	100	85.639	MGP_SPRETEiJ_G0015350	R3hdm1	100	86.807	Mus_spretus
ENSPPYG00000012815	R3HDM1	100	93.931	ENSMPUG00000002412	R3HDM1	100	93.931	Mustela_putorius_furo
ENSPPYG00000012815	R3HDM1	100	91.960	ENSMLUG00000013824	R3HDM1	100	91.960	Myotis_lucifugus
ENSPPYG00000012815	R3HDM1	100	98.183	ENSNLEG00000008622	R3HDM1	100	98.854	Nomascus_leucogenys
ENSPPYG00000012815	R3HDM1	89	72.200	ENSMEUG00000011784	R3HDM1	100	72.330	Notamacropus_eugenii
ENSPPYG00000012815	R3HDM1	100	87.247	ENSODEG00000008607	R3HDM1	100	87.071	Octodon_degus
ENSPPYG00000012815	R3HDM1	94	47.645	ENSONIG00000012017	r3hdm1	98	46.898	Oreochromis_niloticus
ENSPPYG00000012815	R3HDM1	100	80.991	ENSOANG00000007987	R3HDM1	100	80.901	Ornithorhynchus_anatinus
ENSPPYG00000012815	R3HDM1	89	92.785	ENSOCUG00000017366	R3HDM1	98	92.785	Oryctolagus_cuniculus
ENSPPYG00000012815	R3HDM1	79	46.645	ENSORLG00000004297	r3hdm1	94	46.347	Oryzias_latipes
ENSPPYG00000012815	R3HDM1	89	45.894	ENSORLG00015017355	r3hdm1	99	45.278	Oryzias_latipes_hsok
ENSPPYG00000012815	R3HDM1	100	92.391	ENSOGAG00000003136	R3HDM1	100	92.482	Otolemur_garnettii
ENSPPYG00000012815	R3HDM1	100	91.757	ENSOARG00000010788	R3HDM1	100	92.120	Ovis_aries
ENSPPYG00000012815	R3HDM1	100	98.096	ENSPPAG00000027858	R3HDM1	100	98.369	Pan_paniscus
ENSPPYG00000012815	R3HDM1	100	93.569	ENSPPRG00000002626	R3HDM1	100	93.659	Panthera_pardus
ENSPPYG00000012815	R3HDM1	100	93.569	ENSPTIG00000016581	R3HDM1	100	93.659	Panthera_tigris_altaica
ENSPPYG00000012815	R3HDM1	100	98.185	ENSPTRG00000012494	R3HDM1	100	98.369	Pan_troglodytes
ENSPPYG00000012815	R3HDM1	100	97.729	ENSPANG00000026448	R3HDM1	100	97.872	Papio_anubis
ENSPPYG00000012815	R3HDM1	84	74.763	ENSPKIG00000004328	r3hdm1	91	75.000	Paramormyrops_kingsleyae
ENSPPYG00000012815	R3HDM1	100	77.958	ENSPSIG00000012915	R3HDM1	100	78.320	Pelodiscus_sinensis
ENSPPYG00000012815	R3HDM1	100	86.515	ENSPEMG00000015187	R3hdm1	100	87.775	Peromyscus_maniculatus_bairdii
ENSPPYG00000012815	R3HDM1	88	42.051	ENSPMAG00000003369	-	98	42.522	Petromyzon_marinus
ENSPPYG00000012815	R3HDM1	100	83.078	ENSPCIG00000002491	R3HDM1	100	83.258	Phascolarctos_cinereus
ENSPPYG00000012815	R3HDM1	89	45.337	ENSPFOG00000015036	r3hdm1	99	44.837	Poecilia_formosa
ENSPPYG00000012815	R3HDM1	80	47.983	ENSPLAG00000018042	r3hdm1	95	48.553	Poecilia_latipinna
ENSPPYG00000012815	R3HDM1	80	48.247	ENSPMEG00000023947	r3hdm1	95	48.180	Poecilia_mexicana
ENSPPYG00000012815	R3HDM1	89	47.747	ENSPREG00000007902	r3hdm1	88	59.145	Poecilia_reticulata
ENSPPYG00000012815	R3HDM1	100	81.324	ENSPCAG00000006208	R3HDM1	100	80.689	Procavia_capensis
ENSPPYG00000012815	R3HDM1	100	91.584	ENSPCOG00000012698	R3HDM1	100	93.801	Propithecus_coquereli
ENSPPYG00000012815	R3HDM1	100	84.873	ENSPVAG00000006098	R3HDM1	100	84.873	Pteropus_vampyrus
ENSPPYG00000012815	R3HDM1	89	69.086	ENSPNAG00000013952	r3hdm1	95	67.925	Pygocentrus_nattereri
ENSPPYG00000012815	R3HDM1	83	75.080	ENSPNAG00000005436	R3HDM1	99	75.000	Pygocentrus_nattereri
ENSPPYG00000012815	R3HDM1	100	85.114	ENSRNOG00000004099	R3hdm1	100	85.928	Rattus_norvegicus
ENSPPYG00000012815	R3HDM1	100	96.192	ENSRBIG00000033317	R3HDM1	100	97.553	Rhinopithecus_bieti
ENSPPYG00000012815	R3HDM1	100	97.548	ENSRROG00000034534	R3HDM1	100	97.712	Rhinopithecus_roxellana
ENSPPYG00000012815	R3HDM1	100	96.367	ENSSBOG00000020389	R3HDM1	100	96.367	Saimiri_boliviensis_boliviensis
ENSPPYG00000012815	R3HDM1	100	83.002	ENSSHAG00000016999	R3HDM1	100	83.183	Sarcophilus_harrisii
ENSPPYG00000012815	R3HDM1	100	56.322	ENSSFOG00015019851	-	99	56.916	Scleropages_formosus
ENSPPYG00000012815	R3HDM1	100	60.769	ENSSFOG00015014134	r3hdm1	100	68.039	Scleropages_formosus
ENSPPYG00000012815	R3HDM1	99	44.512	ENSSMAG00000001669	r3hdm1	99	43.526	Scophthalmus_maximus
ENSPPYG00000012815	R3HDM1	89	47.148	ENSSDUG00000010749	r3hdm1	99	47.193	Seriola_dumerili
ENSPPYG00000012815	R3HDM1	99	46.753	ENSSLDG00000004499	r3hdm1	99	46.447	Seriola_lalandi_dorsalis
ENSPPYG00000012815	R3HDM1	69	80.333	ENSSARG00000000352	-	68	81.754	Sorex_araneus
ENSPPYG00000012815	R3HDM1	100	79.422	ENSSPUG00000004167	R3HDM1	100	79.513	Sphenodon_punctatus
ENSPPYG00000012815	R3HDM1	89	49.048	ENSSPAG00000004648	r3hdm1	99	48.491	Stegastes_partitus
ENSPPYG00000012815	R3HDM1	100	93.116	ENSSSCG00000015692	R3HDM1	100	93.297	Sus_scrofa
ENSPPYG00000012815	R3HDM1	100	73.105	ENSTGUG00000011750	R3HDM1	100	72.834	Taeniopygia_guttata
ENSPPYG00000012815	R3HDM1	79	45.905	ENSTRUG00000011654	r3hdm1	93	45.699	Takifugu_rubripes
ENSPPYG00000012815	R3HDM1	87	45.363	ENSTNIG00000010362	r3hdm1	95	45.057	Tetraodon_nigroviridis
ENSPPYG00000012815	R3HDM1	100	86.673	ENSTTRG00000003935	R3HDM1	100	86.854	Tursiops_truncatus
ENSPPYG00000012815	R3HDM1	70	93.694	ENSUAMG00000024806	R3HDM1	94	92.829	Ursus_americanus
ENSPPYG00000012815	R3HDM1	100	89.393	ENSUMAG00000005552	R3HDM1	100	90.538	Ursus_maritimus
ENSPPYG00000012815	R3HDM1	93	91.228	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSPPYG00000012815	R3HDM1	100	90.757	ENSVVUG00000006457	R3HDM1	100	90.757	Vulpes_vulpes
ENSPPYG00000012815	R3HDM1	90	66.901	ENSXETG00000019330	r3hdm1	100	66.700	Xenopus_tropicalis
ENSPPYG00000012815	R3HDM1	67	48.542	ENSXCOG00000017448	r3hdm1	94	49.424	Xiphophorus_couchianus
ENSPPYG00000012815	R3HDM1	89	45.853	ENSXMAG00000007885	r3hdm1	99	45.098	Xiphophorus_maculatus