EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000013044 (Gene tree)
Gene ID: -
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 37484 bases
Position: chr2b:88371944-88409427
Accession: 10768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000014574	SF3b1	PF08920.10	8.2e-48	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000015163	SF3B1-201	6077	-	ENSPPYP00000014574	1140 (aa)	-	H2P874

Gene Model

Click here to download ENSPPYG00000013044's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000013044's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000013044	SF3B1	96	98.814	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSPPYG00000013044	SF3B1	95	97.315	ENSAPOG00000011894	sf3b1	82	97.138	Acanthochromis_polyacanthus
ENSPPYG00000013044	SF3B1	96	98.814	ENSAMEG00000013809	SF3B1	99	98.814	Ailuropoda_melanoleuca
ENSPPYG00000013044	SF3B1	97	94.394	ENSACIG00000020910	sf3b1	97	94.394	Amphilophus_citrinellus
ENSPPYG00000013044	SF3B1	95	97.138	ENSAOCG00000004478	sf3b1	82	97.138	Amphiprion_ocellaris
ENSPPYG00000013044	SF3B1	95	97.138	ENSAPEG00000012937	sf3b1	82	97.138	Amphiprion_percula
ENSPPYG00000013044	SF3B1	95	96.415	ENSATEG00000020435	sf3b1	83	96.415	Anabas_testudineus
ENSPPYG00000013044	SF3B1	96	98.631	ENSAPLG00000003993	SF3B1	99	98.631	Anas_platyrhynchos
ENSPPYG00000013044	SF3B1	96	98.266	ENSACAG00000009612	SF3B1	100	98.266	Anolis_carolinensis
ENSPPYG00000013044	SF3B1	96	98.814	ENSANAG00000021577	SF3B1	100	98.814	Aotus_nancymaae
ENSPPYG00000013044	SF3B1	95	96.307	ENSACLG00000023470	sf3b1	100	96.307	Astatotilapia_calliptera
ENSPPYG00000013044	SF3B1	95	97.415	ENSAMXG00000002219	sf3b1	100	97.415	Astyanax_mexicanus
ENSPPYG00000013044	SF3B1	96	98.723	ENSBTAG00000008915	SF3B1	100	98.723	Bos_taurus
ENSPPYG00000013044	SF3B1	93	73.545	WBGene00011605	sftb-1	82	73.636	Caenorhabditis_elegans
ENSPPYG00000013044	SF3B1	96	98.814	ENSCJAG00000003902	SF3B1	100	98.814	Callithrix_jacchus
ENSPPYG00000013044	SF3B1	96	98.814	ENSCAFG00000010826	SF3B1	100	98.814	Canis_familiaris
ENSPPYG00000013044	SF3B1	96	98.814	ENSCAFG00020004750	SF3B1	100	98.814	Canis_lupus_dingo
ENSPPYG00000013044	SF3B1	96	98.723	ENSCHIG00000015226	SF3B1	100	98.723	Capra_hircus
ENSPPYG00000013044	SF3B1	96	98.723	ENSTSYG00000009214	SF3B1	100	98.723	Carlito_syrichta
ENSPPYG00000013044	SF3B1	96	98.814	ENSCAPG00000006547	SF3B1	99	98.814	Cavia_aperea
ENSPPYG00000013044	SF3B1	96	98.814	ENSCPOG00000009353	SF3B1	100	98.814	Cavia_porcellus
ENSPPYG00000013044	SF3B1	96	98.814	ENSCCAG00000020506	SF3B1	100	98.814	Cebus_capucinus
ENSPPYG00000013044	SF3B1	96	98.814	ENSCATG00000035735	SF3B1	100	98.814	Cercocebus_atys
ENSPPYG00000013044	SF3B1	96	98.814	ENSCLAG00000014767	SF3B1	99	98.814	Chinchilla_lanigera
ENSPPYG00000013044	SF3B1	96	98.814	ENSCSAG00000011505	SF3B1	100	98.814	Chlorocebus_sabaeus
ENSPPYG00000013044	SF3B1	87	98.276	ENSCHOG00000009860	SF3B1	75	98.276	Choloepus_hoffmanni
ENSPPYG00000013044	SF3B1	99	95.698	ENSCPBG00000021902	SF3B1	100	98.540	Chrysemys_picta_bellii
ENSPPYG00000013044	SF3B1	64	83.690	ENSCING00000002558	-	83	83.690	Ciona_intestinalis
ENSPPYG00000013044	SF3B1	99	85.192	ENSCSAVG00000002559	-	99	85.192	Ciona_savignyi
ENSPPYG00000013044	SF3B1	96	98.814	ENSCANG00000029415	SF3B1	100	98.814	Colobus_angolensis_palliatus
ENSPPYG00000013044	SF3B1	96	98.814	ENSCGRG00001016990	Sf3b1	100	98.814	Cricetulus_griseus_chok1gshd
ENSPPYG00000013044	SF3B1	96	98.814	ENSCGRG00000005301	Sf3b1	100	98.814	Cricetulus_griseus_crigri
ENSPPYG00000013044	SF3B1	97	91.049	ENSCSEG00000003860	sf3b1	84	91.049	Cynoglossus_semilaevis
ENSPPYG00000013044	SF3B1	95	97.284	ENSCVAG00000003680	sf3b1	81	97.284	Cyprinodon_variegatus
ENSPPYG00000013044	SF3B1	100	97.045	ENSDARG00000056138	sf3b1	100	97.045	Danio_rerio
ENSPPYG00000013044	SF3B1	96	98.814	ENSDNOG00000011754	SF3B1	100	98.814	Dasypus_novemcinctus
ENSPPYG00000013044	SF3B1	96	98.814	ENSDORG00000002399	Sf3b1	87	98.814	Dipodomys_ordii
ENSPPYG00000013044	SF3B1	100	81.430	FBgn0031266	Sf3b1	90	81.430	Drosophila_melanogaster
ENSPPYG00000013044	SF3B1	80	97.841	ENSETEG00000009188	SF3B1	100	97.841	Echinops_telfairi
ENSPPYG00000013044	SF3B1	94	92.215	ENSEBUG00000004325	sf3b1	96	92.215	Eptatretus_burgeri
ENSPPYG00000013044	SF3B1	96	98.814	ENSEASG00005020159	SF3B1	98	98.814	Equus_asinus_asinus
ENSPPYG00000013044	SF3B1	96	98.814	ENSECAG00000021657	SF3B1	98	98.814	Equus_caballus
ENSPPYG00000013044	SF3B1	85	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSPPYG00000013044	SF3B1	100	96.953	ENSELUG00000005977	sf3b1	80	96.953	Esox_lucius
ENSPPYG00000013044	SF3B1	96	98.814	ENSFCAG00000005038	SF3B1	100	98.814	Felis_catus
ENSPPYG00000013044	SF3B1	96	98.723	ENSFALG00000004281	SF3B1	99	98.723	Ficedula_albicollis
ENSPPYG00000013044	SF3B1	96	98.814	ENSFDAG00000017510	SF3B1	100	98.814	Fukomys_damarensis
ENSPPYG00000013044	SF3B1	100	97.045	ENSFHEG00000014333	sf3b1	100	97.045	Fundulus_heteroclitus
ENSPPYG00000013044	SF3B1	100	92.576	ENSGMOG00000006773	sf3b1	87	92.576	Gadus_morhua
ENSPPYG00000013044	SF3B1	96	98.631	ENSGALG00000008038	SF3B1	100	98.631	Gallus_gallus
ENSPPYG00000013044	SF3B1	95	96.676	ENSGAFG00000000704	sf3b1	84	96.676	Gambusia_affinis
ENSPPYG00000013044	SF3B1	100	96.694	ENSGACG00000008839	sf3b1	83	96.694	Gasterosteus_aculeatus
ENSPPYG00000013044	SF3B1	96	98.540	ENSGAGG00000017478	SF3B1	100	98.540	Gopherus_agassizii
ENSPPYG00000013044	SF3B1	99	94.362	ENSGGOG00000009264	SF3B1	99	94.362	Gorilla_gorilla
ENSPPYG00000013044	SF3B1	95	96.392	ENSHBUG00000007705	sf3b1	99	96.392	Haplochromis_burtoni
ENSPPYG00000013044	SF3B1	96	98.814	ENSHGLG00000008285	-	99	98.814	Heterocephalus_glaber_female
ENSPPYG00000013044	SF3B1	96	96.442	ENSHGLG00100005535	-	99	96.442	Heterocephalus_glaber_male
ENSPPYG00000013044	SF3B1	100	97.138	ENSHCOG00000016775	sf3b1	100	97.138	Hippocampus_comes
ENSPPYG00000013044	SF3B1	96	96.530	ENSIPUG00000013171	sf3b1	84	96.530	Ictalurus_punctatus
ENSPPYG00000013044	SF3B1	96	98.814	ENSSTOG00000011034	SF3B1	100	98.814	Ictidomys_tridecemlineatus
ENSPPYG00000013044	SF3B1	96	98.723	ENSJJAG00000010903	Sf3b1	99	98.723	Jaculus_jaculus
ENSPPYG00000013044	SF3B1	100	96.239	ENSKMAG00000004009	sf3b1	83	96.239	Kryptolebias_marmoratus
ENSPPYG00000013044	SF3B1	95	96.768	ENSLBEG00000022208	sf3b1	83	96.768	Labrus_bergylta
ENSPPYG00000013044	SF3B1	95	94.834	ENSLACG00000014832	SF3B1	99	94.834	Latimeria_chalumnae
ENSPPYG00000013044	SF3B1	95	97.516	ENSLOCG00000003899	sf3b1	83	97.516	Lepisosteus_oculatus
ENSPPYG00000013044	SF3B1	96	98.814	ENSLAFG00000001956	SF3B1	100	98.814	Loxodonta_africana
ENSPPYG00000013044	SF3B1	96	98.814	ENSMMUG00000022430	SF3B1	99	98.814	Macaca_mulatta
ENSPPYG00000013044	SF3B1	96	98.814	ENSMNEG00000042333	SF3B1	100	98.814	Macaca_nemestrina
ENSPPYG00000013044	SF3B1	94	94.991	ENSMLEG00000026141	SF3B1	88	94.991	Mandrillus_leucophaeus
ENSPPYG00000013044	SF3B1	100	96.768	ENSMAMG00000010241	sf3b1	100	96.768	Mastacembelus_armatus
ENSPPYG00000013044	SF3B1	95	96.307	ENSMZEG00005021254	sf3b1	100	96.307	Maylandia_zebra
ENSPPYG00000013044	SF3B1	96	98.631	ENSMGAG00000007017	SF3B1	99	98.631	Meleagris_gallopavo
ENSPPYG00000013044	SF3B1	96	93.796	ENSMAUG00000009071	Sf3b1	99	93.796	Mesocricetus_auratus
ENSPPYG00000013044	SF3B1	96	98.723	ENSMICG00000013879	SF3B1	100	98.723	Microcebus_murinus
ENSPPYG00000013044	SF3B1	96	93.613	ENSMOCG00000000455	Sf3b1	99	93.613	Microtus_ochrogaster
ENSPPYG00000013044	SF3B1	76	96.774	ENSMMOG00000000475	sf3b1	79	96.774	Mola_mola
ENSPPYG00000013044	SF3B1	96	98.723	ENSMODG00000012275	SF3B1	100	98.723	Monodelphis_domestica
ENSPPYG00000013044	SF3B1	95	96.676	ENSMALG00000017211	sf3b1	82	96.676	Monopterus_albus
ENSPPYG00000013044	SF3B1	96	98.814	MGP_CAROLIEiJ_G0014141	Sf3b1	100	98.814	Mus_caroli
ENSPPYG00000013044	SF3B1	96	98.814	ENSMUSG00000025982	Sf3b1	100	98.814	Mus_musculus
ENSPPYG00000013044	SF3B1	96	98.814	MGP_SPRETEiJ_G0014947	Sf3b1	100	98.814	Mus_spretus
ENSPPYG00000013044	SF3B1	96	98.814	ENSMPUG00000007799	SF3B1	100	98.814	Mustela_putorius_furo
ENSPPYG00000013044	SF3B1	96	97.445	ENSMLUG00000000840	SF3B1	100	97.445	Myotis_lucifugus
ENSPPYG00000013044	SF3B1	96	98.814	ENSNGAG00000021884	-	100	98.814	Nannospalax_galili
ENSPPYG00000013044	SF3B1	100	94.485	ENSNBRG00000015816	sf3b1	91	94.485	Neolamprologus_brichardi
ENSPPYG00000013044	SF3B1	96	98.814	ENSNLEG00000006861	SF3B1	100	98.814	Nomascus_leucogenys
ENSPPYG00000013044	SF3B1	70	100.000	ENSMEUG00000015848	-	59	100.000	Notamacropus_eugenii
ENSPPYG00000013044	SF3B1	100	100.000	ENSOPRG00000008596	SF3B1	88	100.000	Ochotona_princeps
ENSPPYG00000013044	SF3B1	96	98.814	ENSODEG00000011153	-	100	98.814	Octodon_degus
ENSPPYG00000013044	SF3B1	95	96.307	ENSONIG00000013758	sf3b1	100	96.307	Oreochromis_niloticus
ENSPPYG00000013044	SF3B1	95	99.168	ENSOCUG00000012722	-	96	99.168	Oryctolagus_cuniculus
ENSPPYG00000013044	SF3B1	100	96.768	ENSORLG00000020219	sf3b1	100	96.768	Oryzias_latipes
ENSPPYG00000013044	SF3B1	100	96.768	ENSORLG00020001746	sf3b1	100	96.768	Oryzias_latipes_hni
ENSPPYG00000013044	SF3B1	59	95.425	ENSORLG00015001759	sf3b1	81	95.425	Oryzias_latipes_hsok
ENSPPYG00000013044	SF3B1	100	96.768	ENSOMEG00000019231	sf3b1	100	96.768	Oryzias_melastigma
ENSPPYG00000013044	SF3B1	96	98.723	ENSOARG00000015374	SF3B1	100	98.723	Ovis_aries
ENSPPYG00000013044	SF3B1	96	98.814	ENSPPAG00000035007	SF3B1	100	98.814	Pan_paniscus
ENSPPYG00000013044	SF3B1	96	98.814	ENSPPRG00000009090	SF3B1	100	98.814	Panthera_pardus
ENSPPYG00000013044	SF3B1	96	98.814	ENSPTIG00000021557	SF3B1	100	98.814	Panthera_tigris_altaica
ENSPPYG00000013044	SF3B1	99	89.680	ENSPTRG00000012771	SF3B1	99	89.680	Pan_troglodytes
ENSPPYG00000013044	SF3B1	96	98.814	ENSPANG00000013417	SF3B1	100	98.814	Papio_anubis
ENSPPYG00000013044	SF3B1	97	95.380	ENSPKIG00000000784	sf3b1	100	97.235	Paramormyrops_kingsleyae
ENSPPYG00000013044	SF3B1	95	99.723	ENSPSIG00000017222	SF3B1	84	99.723	Pelodiscus_sinensis
ENSPPYG00000013044	SF3B1	84	97.289	ENSPMGG00000004330	sf3b1	80	97.289	Periophthalmus_magnuspinnatus
ENSPPYG00000013044	SF3B1	96	98.814	ENSPEMG00000010699	Sf3b1	100	98.814	Peromyscus_maniculatus_bairdii
ENSPPYG00000013044	SF3B1	100	94.194	ENSPMAG00000001311	sf3b1	100	94.194	Petromyzon_marinus
ENSPPYG00000013044	SF3B1	96	98.723	ENSPCIG00000010642	SF3B1	100	98.723	Phascolarctos_cinereus
ENSPPYG00000013044	SF3B1	95	96.676	ENSPFOG00000000073	sf3b1	82	96.676	Poecilia_formosa
ENSPPYG00000013044	SF3B1	95	96.676	ENSPLAG00000002293	sf3b1	82	96.676	Poecilia_latipinna
ENSPPYG00000013044	SF3B1	95	96.676	ENSPMEG00000000446	sf3b1	81	96.676	Poecilia_mexicana
ENSPPYG00000013044	SF3B1	95	96.768	ENSPREG00000019652	sf3b1	82	96.768	Poecilia_reticulata
ENSPPYG00000013044	SF3B1	96	98.631	ENSPCAG00000009292	SF3B1	100	98.631	Procavia_capensis
ENSPPYG00000013044	SF3B1	96	98.723	ENSPCOG00000024074	SF3B1	100	98.723	Propithecus_coquereli
ENSPPYG00000013044	SF3B1	96	98.814	ENSPVAG00000008302	SF3B1	100	98.814	Pteropus_vampyrus
ENSPPYG00000013044	SF3B1	95	96.307	ENSPNYG00000014939	sf3b1	100	96.307	Pundamilia_nyererei
ENSPPYG00000013044	SF3B1	100	97.415	ENSPNAG00000008288	sf3b1	100	97.415	Pygocentrus_nattereri
ENSPPYG00000013044	SF3B1	96	98.814	ENSRNOG00000013516	Sf3b1	100	98.814	Rattus_norvegicus
ENSPPYG00000013044	SF3B1	99	94.617	ENSRBIG00000026096	SF3B1	100	94.617	Rhinopithecus_bieti
ENSPPYG00000013044	SF3B1	96	98.814	ENSRROG00000031308	SF3B1	100	98.814	Rhinopithecus_roxellana
ENSPPYG00000013044	SF3B1	96	98.814	ENSSBOG00000020080	SF3B1	100	98.814	Saimiri_boliviensis_boliviensis
ENSPPYG00000013044	SF3B1	96	98.723	ENSSHAG00000017564	SF3B1	100	98.723	Sarcophilus_harrisii
ENSPPYG00000013044	SF3B1	95	97.507	ENSSFOG00015021535	sf3b1	82	97.507	Scleropages_formosus
ENSPPYG00000013044	SF3B1	99	96.504	ENSSMAG00000013977	sf3b1	99	96.504	Scophthalmus_maximus
ENSPPYG00000013044	SF3B1	95	96.861	ENSSDUG00000017422	sf3b1	82	96.861	Seriola_dumerili
ENSPPYG00000013044	SF3B1	95	96.861	ENSSLDG00000019495	sf3b1	82	96.861	Seriola_lalandi_dorsalis
ENSPPYG00000013044	SF3B1	73	100.000	ENSSARG00000007016	SF3B1	64	100.000	Sorex_araneus
ENSPPYG00000013044	SF3B1	100	98.358	ENSSPUG00000000410	SF3B1	100	98.358	Sphenodon_punctatus
ENSPPYG00000013044	SF3B1	95	96.606	ENSSPAG00000010451	sf3b1	82	96.606	Stegastes_partitus
ENSPPYG00000013044	SF3B1	96	98.814	ENSSSCG00000016075	SF3B1	100	98.541	Sus_scrofa
ENSPPYG00000013044	SF3B1	96	98.631	ENSTGUG00000010553	SF3B1	100	98.631	Taeniopygia_guttata
ENSPPYG00000013044	SF3B1	95	96.239	ENSTRUG00000015534	sf3b1	83	96.239	Takifugu_rubripes
ENSPPYG00000013044	SF3B1	90	100.000	ENSTBEG00000008714	SF3B1	86	100.000	Tupaia_belangeri
ENSPPYG00000013044	SF3B1	91	100.000	ENSTTRG00000003414	SF3B1	83	100.000	Tursiops_truncatus
ENSPPYG00000013044	SF3B1	90	90.594	ENSUAMG00000018506	SF3B1	98	99.190	Ursus_americanus
ENSPPYG00000013044	SF3B1	96	98.814	ENSUMAG00000020945	SF3B1	100	98.814	Ursus_maritimus
ENSPPYG00000013044	SF3B1	100	95.220	ENSVPAG00000005798	SF3B1	95	95.220	Vicugna_pacos
ENSPPYG00000013044	SF3B1	96	98.814	ENSVVUG00000025948	SF3B1	95	98.814	Vulpes_vulpes
ENSPPYG00000013044	SF3B1	100	97.445	ENSXETG00000013339	sf3b1	100	97.445	Xenopus_tropicalis
ENSPPYG00000013044	SF3B1	94	92.421	ENSXCOG00000018086	sf3b1	84	92.421	Xiphophorus_couchianus
ENSPPYG00000013044	SF3B1	95	96.768	ENSXMAG00000007369	sf3b1	100	92.948	Xiphophorus_maculatus