EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000013265 (Gene tree)
Gene ID: 100174230
Gene Symbol: NCL
Alias: C23|Nsr1
Full Name: nucleolin
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 9205 bases
Position: chr2b:123850414-123859618
Accession: 7667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000014829	RRM_1	PF00076.22	4.2e-56	1	3
ENSPPYP00000014829	RRM_1	PF00076.22	4.2e-56	2	3
ENSPPYP00000014829	RRM_1	PF00076.22	4.2e-56	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000015426	NCL-201	2767	-	ENSPPYP00000014829	713 (aa)	-	H2P8W2

Gene Model

Click here to download ENSPPYG00000013265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000013265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000013265	NCL	92	91.311	ENSG00000115053	NCL	100	99.291	Homo_sapiens
ENSPPYG00000013265	NCL	53	86.684	ENSAMEG00000016289	NCL	70	85.573	Ailuropoda_melanoleuca
ENSPPYG00000013265	NCL	92	84.802	ENSANAG00000035814	-	100	85.754	Aotus_nancymaae
ENSPPYG00000013265	NCL	60	87.692	ENSANAG00000024378	-	86	87.879	Aotus_nancymaae
ENSPPYG00000013265	NCL	94	76.522	ENSBTAG00000016174	NCL	70	84.843	Bos_taurus
ENSPPYG00000013265	NCL	71	92.642	ENSBTAG00000026909	-	95	92.642	Bos_taurus
ENSPPYG00000013265	NCL	89	92.157	ENSBTAG00000051320	-	81	90.141	Bos_taurus
ENSPPYG00000013265	NCL	54	90.164	ENSBTAG00000050728	-	89	90.164	Bos_taurus
ENSPPYG00000013265	NCL	92	84.615	ENSCJAG00000013538	NCL	100	85.437	Callithrix_jacchus
ENSPPYG00000013265	NCL	92	84.266	ENSCAFG00000011037	NCL	92	83.866	Canis_familiaris
ENSPPYG00000013265	NCL	84	83.224	ENSCAFG00020023145	NCL	96	84.557	Canis_lupus_dingo
ENSPPYG00000013265	NCL	74	96.460	ENSCHIG00000021052	-	94	96.503	Capra_hircus
ENSPPYG00000013265	NCL	92	65.152	ENSCHIG00000012143	-	84	69.213	Capra_hircus
ENSPPYG00000013265	NCL	92	74.433	ENSCHIG00000026149	-	63	76.169	Capra_hircus
ENSPPYG00000013265	NCL	85	80.065	ENSCHIG00000010894	-	76	85.178	Capra_hircus
ENSPPYG00000013265	NCL	92	82.451	ENSTSYG00000004355	-	92	82.549	Carlito_syrichta
ENSPPYG00000013265	NCL	90	68.992	ENSTSYG00000036886	-	91	61.985	Carlito_syrichta
ENSPPYG00000013265	NCL	95	79.210	ENSTSYG00000029779	-	98	78.803	Carlito_syrichta
ENSPPYG00000013265	NCL	53	84.252	ENSCAPG00000009405	NCL	100	78.073	Cavia_aperea
ENSPPYG00000013265	NCL	53	85.379	ENSCPOG00000001034	NCL	100	78.947	Cavia_porcellus
ENSPPYG00000013265	NCL	54	89.447	ENSCCAG00000000551	-	76	89.552	Cebus_capucinus
ENSPPYG00000013265	NCL	53	87.467	ENSCCAG00000021040	-	100	85.056	Cebus_capucinus
ENSPPYG00000013265	NCL	92	89.954	ENSCATG00000037033	NCL	100	89.371	Cercocebus_atys
ENSPPYG00000013265	NCL	92	79.819	ENSCLAG00000013080	NCL	100	79.778	Chinchilla_lanigera
ENSPPYG00000013265	NCL	53	87.760	ENSCSAG00000006660	NCL	95	89.165	Chlorocebus_sabaeus
ENSPPYG00000013265	NCL	62	67.647	ENSCHOG00000012860	NCL	88	67.793	Choloepus_hoffmanni
ENSPPYG00000013265	NCL	58	100.000	ENSCANG00000036756	NCL	94	100.000	Colobus_angolensis_palliatus
ENSPPYG00000013265	NCL	92	75.526	ENSCGRG00001024315	-	91	75.375	Cricetulus_griseus_chok1gshd
ENSPPYG00000013265	NCL	92	61.516	ENSCGRG00001022350	-	95	61.286	Cricetulus_griseus_chok1gshd
ENSPPYG00000013265	NCL	85	77.617	ENSCGRG00000017894	-	88	75.362	Cricetulus_griseus_crigri
ENSPPYG00000013265	NCL	100	68.560	ENSDNOG00000046347	-	99	67.688	Dasypus_novemcinctus
ENSPPYG00000013265	NCL	92	78.248	ENSDNOG00000010783	-	100	78.691	Dasypus_novemcinctus
ENSPPYG00000013265	NCL	54	75.827	ENSDORG00000012513	-	92	72.714	Dipodomys_ordii
ENSPPYG00000013265	NCL	53	64.524	ENSDORG00000023596	-	94	64.222	Dipodomys_ordii
ENSPPYG00000013265	NCL	72	60.714	ENSETEG00000008139	-	89	59.259	Echinops_telfairi
ENSPPYG00000013265	NCL	53	82.461	ENSETEG00000018937	-	62	80.045	Echinops_telfairi
ENSPPYG00000013265	NCL	62	56.027	ENSETEG00000008553	-	88	55.902	Echinops_telfairi
ENSPPYG00000013265	NCL	53	82.058	ENSETEG00000014756	-	86	82.152	Echinops_telfairi
ENSPPYG00000013265	NCL	89	82.280	ENSEASG00005008488	NCL	86	98.571	Equus_asinus_asinus
ENSPPYG00000013265	NCL	92	83.008	ENSECAG00000021868	NCL	70	85.941	Equus_caballus
ENSPPYG00000013265	NCL	85	73.366	ENSEEUG00000005913	NCL	85	73.607	Erinaceus_europaeus
ENSPPYG00000013265	NCL	92	83.535	ENSFCAG00000027622	NCL	100	84.262	Felis_catus
ENSPPYG00000013265	NCL	91	81.527	ENSFDAG00000014291	NCL	71	84.980	Fukomys_damarensis
ENSPPYG00000013265	NCL	92	91.768	ENSGGOG00000004300	NCL	100	92.297	Gorilla_gorilla
ENSPPYG00000013265	NCL	91	71.494	ENSHGLG00000011069	-	62	72.422	Heterocephalus_glaber_female
ENSPPYG00000013265	NCL	92	81.515	ENSHGLG00000002031	-	100	82.008	Heterocephalus_glaber_female
ENSPPYG00000013265	NCL	56	84.091	ENSHGLG00000005133	-	99	74.825	Heterocephalus_glaber_female
ENSPPYG00000013265	NCL	92	80.303	ENSHGLG00100014537	-	100	81.172	Heterocephalus_glaber_male
ENSPPYG00000013265	NCL	83	76.253	ENSHGLG00100000745	-	85	81.119	Heterocephalus_glaber_male
ENSPPYG00000013265	NCL	55	73.869	ENSJJAG00000016165	Ncl	93	73.835	Jaculus_jaculus
ENSPPYG00000013265	NCL	91	69.406	ENSLAFG00000013061	NCL	85	83.803	Loxodonta_africana
ENSPPYG00000013265	NCL	92	90.715	ENSMFAG00000040385	NCL	100	90.210	Macaca_fascicularis
ENSPPYG00000013265	NCL	92	90.715	ENSMMUG00000018094	NCL	99	100.000	Macaca_mulatta
ENSPPYG00000013265	NCL	92	86.128	ENSMNEG00000023839	NCL	99	100.000	Macaca_nemestrina
ENSPPYG00000013265	NCL	92	90.107	ENSMLEG00000028935	NCL	100	89.510	Mandrillus_leucophaeus
ENSPPYG00000013265	NCL	100	84.958	ENSMICG00000002538	-	92	83.537	Microcebus_murinus
ENSPPYG00000013265	NCL	92	70.776	ENSMICG00000029975	-	86	82.979	Microcebus_murinus
ENSPPYG00000013265	NCL	92	70.852	MGP_PahariEiJ_G0027599	Ncl	61	73.778	Mus_pahari
ENSPPYG00000013265	NCL	92	79.217	ENSMLUG00000014547	NCL	62	84.270	Myotis_lucifugus
ENSPPYG00000013265	NCL	92	75.632	ENSNGAG00000002454	-	61	77.162	Nannospalax_galili
ENSPPYG00000013265	NCL	53	65.699	ENSNGAG00000006188	-	54	65.092	Nannospalax_galili
ENSPPYG00000013265	NCL	85	77.858	ENSNLEG00000014107	-	95	77.920	Nomascus_leucogenys
ENSPPYG00000013265	NCL	91	55.894	ENSODEG00000007803	-	100	64.087	Octodon_degus
ENSPPYG00000013265	NCL	62	85.593	ENSODEG00000002441	-	84	85.593	Octodon_degus
ENSPPYG00000013265	NCL	91	75.152	ENSODEG00000003281	-	100	75.867	Octodon_degus
ENSPPYG00000013265	NCL	83	84.115	ENSOCUG00000004312	NCL	93	83.217	Oryctolagus_cuniculus
ENSPPYG00000013265	NCL	70	87.931	ENSOARG00000013710	-	73	79.326	Ovis_aries
ENSPPYG00000013265	NCL	54	70.437	ENSOARG00000004072	-	71	68.243	Ovis_aries
ENSPPYG00000013265	NCL	91	74.174	ENSOARG00000020709	-	65	80.580	Ovis_aries
ENSPPYG00000013265	NCL	76	86.458	ENSOARG00000013270	-	53	90.110	Ovis_aries
ENSPPYG00000013265	NCL	92	90.701	ENSPPAG00000011619	NCL	92	100.000	Pan_paniscus
ENSPPYG00000013265	NCL	92	83.510	ENSPPRG00000012603	NCL	100	84.379	Panthera_pardus
ENSPPYG00000013265	NCL	91	83.206	ENSPTIG00000010393	NCL	99	84.107	Panthera_tigris_altaica
ENSPPYG00000013265	NCL	92	91.463	ENSPTRG00000013025	NCL	100	92.157	Pan_troglodytes
ENSPPYG00000013265	NCL	92	90.715	ENSPANG00000010292	NCL	100	90.210	Papio_anubis
ENSPPYG00000013265	NCL	91	77.795	ENSPCOG00000004160	-	94	75.076	Propithecus_coquereli
ENSPPYG00000013265	NCL	92	84.977	ENSPCOG00000003051	-	91	83.257	Propithecus_coquereli
ENSPPYG00000013265	NCL	92	81.900	ENSPVAG00000000297	NCL	70	84.356	Pteropus_vampyrus
ENSPPYG00000013265	NCL	92	73.472	ENSRNOG00000018273	Ncl	61	76.222	Rattus_norvegicus
ENSPPYG00000013265	NCL	92	84.475	ENSRBIG00000037525	-	63	86.517	Rhinopithecus_bieti
ENSPPYG00000013265	NCL	73	99.077	ENSRBIG00000035396	-	99	99.077	Rhinopithecus_bieti
ENSPPYG00000013265	NCL	99	84.906	ENSRROG00000036103	-	99	86.364	Rhinopithecus_roxellana
ENSPPYG00000013265	NCL	92	89.329	ENSRROG00000028756	-	99	99.644	Rhinopithecus_roxellana
ENSPPYG00000013265	NCL	92	87.842	ENSSBOG00000029193	-	100	88.827	Saimiri_boliviensis_boliviensis
ENSPPYG00000013265	NCL	67	75.342	ENSSBOG00000023094	-	76	75.566	Saimiri_boliviensis_boliviensis
ENSPPYG00000013265	NCL	92	73.323	ENSSBOG00000027549	-	94	83.900	Saimiri_boliviensis_boliviensis
ENSPPYG00000013265	NCL	53	86.684	ENSSSCG00000016275	NCL	92	79.341	Sus_scrofa
ENSPPYG00000013265	NCL	62	78.550	ENSTBEG00000002469	-	63	78.354	Tupaia_belangeri
ENSPPYG00000013265	NCL	55	74.674	ENSTBEG00000001546	-	85	73.607	Tupaia_belangeri
ENSPPYG00000013265	NCL	92	80.758	ENSTTRG00000009094	NCL	91	81.069	Tursiops_truncatus
ENSPPYG00000013265	NCL	71	81.995	ENSUAMG00000005639	NCL	100	86.337	Ursus_americanus
ENSPPYG00000013265	NCL	53	86.684	ENSUMAG00000015789	NCL	100	83.682	Ursus_maritimus
ENSPPYG00000013265	NCL	66	88.732	ENSVPAG00000001796	NCL	66	88.732	Vicugna_pacos
ENSPPYG00000013265	NCL	100	82.058	ENSVVUG00000025564	NCL	69	82.213	Vulpes_vulpes