EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000013606 (Gene tree)
Gene ID: 100436729
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 373352 bases
Position: chr3:33044178-33417529
Accession: 100436729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000023620	CMS1	PF14617.6	7.7e-33	1	1
ENSPPYP00000015211	CMS1	PF14617.6	8.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000015818	CMSS1-202	840	-	ENSPPYP00000015211	279 (aa)	XP_009236920	H2P9X1
ENSPPYT00000032889	CMSS1-201	1053	-	ENSPPYP00000023620	273 (aa)	-	K7ESV3

Gene Model

Click here to download ENSPPYG00000013606's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000013606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000013606	CMSS1	100	95.699	ENSG00000184220	CMSS1	100	96.000	Homo_sapiens
ENSPPYG00000013606	CMSS1	74	64.356	ENSAPOG00000010604	cmss1	96	59.322	Acanthochromis_polyacanthus
ENSPPYG00000013606	CMSS1	95	89.189	ENSAMEG00000004092	CMSS1	100	89.189	Ailuropoda_melanoleuca
ENSPPYG00000013606	CMSS1	74	53.960	ENSACIG00000021854	cmss1	75	53.960	Amphilophus_citrinellus
ENSPPYG00000013606	CMSS1	100	50.825	ENSAOCG00000013361	cmss1	100	51.485	Amphiprion_ocellaris
ENSPPYG00000013606	CMSS1	100	50.820	ENSAPEG00000005829	cmss1	100	52.333	Amphiprion_percula
ENSPPYG00000013606	CMSS1	100	53.535	ENSATEG00000008209	cmss1	100	53.767	Anabas_testudineus
ENSPPYG00000013606	CMSS1	84	70.000	ENSAPLG00000010542	CMSS1	100	70.000	Anas_platyrhynchos
ENSPPYG00000013606	CMSS1	94	63.636	ENSACAG00000011065	CMSS1	97	63.636	Anolis_carolinensis
ENSPPYG00000013606	CMSS1	100	92.500	ENSANAG00000023565	CMSS1	100	92.500	Aotus_nancymaae
ENSPPYG00000013606	CMSS1	100	49.013	ENSACLG00000027294	cmss1	100	49.671	Astatotilapia_calliptera
ENSPPYG00000013606	CMSS1	100	46.309	ENSAMXG00000002046	cmss1	100	47.458	Astyanax_mexicanus
ENSPPYG00000013606	CMSS1	100	86.738	ENSBTAG00000013663	CMSS1	100	86.738	Bos_taurus
ENSPPYG00000013606	CMSS1	100	92.500	ENSCJAG00000000610	CMSS1	100	92.500	Callithrix_jacchus
ENSPPYG00000013606	CMSS1	95	90.698	ENSCAFG00000009230	CMSS1	93	90.698	Canis_familiaris
ENSPPYG00000013606	CMSS1	85	83.621	ENSCAFG00020024156	-	76	80.000	Canis_lupus_dingo
ENSPPYG00000013606	CMSS1	94	90.272	ENSCAFG00020009464	-	95	89.961	Canis_lupus_dingo
ENSPPYG00000013606	CMSS1	94	87.938	ENSCHIG00000013003	CMSS1	93	87.938	Capra_hircus
ENSPPYG00000013606	CMSS1	95	88.372	ENSTSYG00000009266	CMSS1	99	88.372	Carlito_syrichta
ENSPPYG00000013606	CMSS1	82	72.052	ENSCAPG00000013584	CMSS1	100	72.489	Cavia_aperea
ENSPPYG00000013606	CMSS1	100	86.738	ENSCPOG00000014680	CMSS1	100	86.738	Cavia_porcellus
ENSPPYG00000013606	CMSS1	100	93.571	ENSCCAG00000034685	CMSS1	100	93.571	Cebus_capucinus
ENSPPYG00000013606	CMSS1	100	95.341	ENSCATG00000031980	CMSS1	99	96.512	Cercocebus_atys
ENSPPYG00000013606	CMSS1	84	93.013	ENSCLAG00000011241	CMSS1	98	93.013	Chinchilla_lanigera
ENSPPYG00000013606	CMSS1	90	96.735	ENSCSAG00000006024	CMSS1	100	96.735	Chlorocebus_sabaeus
ENSPPYG00000013606	CMSS1	100	68.459	ENSCHOG00000012098	CMSS1	100	68.459	Choloepus_hoffmanni
ENSPPYG00000013606	CMSS1	69	40.816	ENSCING00000014848	-	100	41.176	Ciona_intestinalis
ENSPPYG00000013606	CMSS1	100	94.982	ENSCANG00000031337	CMSS1	100	94.982	Colobus_angolensis_palliatus
ENSPPYG00000013606	CMSS1	100	82.079	ENSCGRG00001014305	Cmss1	100	82.079	Cricetulus_griseus_chok1gshd
ENSPPYG00000013606	CMSS1	94	82.812	ENSCGRG00000006722	Cmss1	99	82.812	Cricetulus_griseus_crigri
ENSPPYG00000013606	CMSS1	100	50.168	ENSCSEG00000004958	cmss1	100	50.987	Cynoglossus_semilaevis
ENSPPYG00000013606	CMSS1	100	51.557	ENSCVAG00000005039	cmss1	100	52.921	Cyprinodon_variegatus
ENSPPYG00000013606	CMSS1	100	46.128	ENSDARG00000112579	cmss1	100	47.119	Danio_rerio
ENSPPYG00000013606	CMSS1	95	86.100	ENSDNOG00000040418	CMSS1	92	86.100	Dasypus_novemcinctus
ENSPPYG00000013606	CMSS1	100	86.738	ENSDORG00000010461	Cmss1	100	86.738	Dipodomys_ordii
ENSPPYG00000013606	CMSS1	94	83.658	ENSEASG00005010966	CMSS1	99	91.781	Equus_asinus_asinus
ENSPPYG00000013606	CMSS1	99	85.978	ENSECAG00000015662	CMSS1	99	91.150	Equus_caballus
ENSPPYG00000013606	CMSS1	100	56.989	ENSEEUG00000007624	-	100	56.989	Erinaceus_europaeus
ENSPPYG00000013606	CMSS1	100	46.602	ENSELUG00000019459	cmss1	100	51.000	Esox_lucius
ENSPPYG00000013606	CMSS1	100	91.756	ENSFCAG00000044577	CMSS1	100	91.756	Felis_catus
ENSPPYG00000013606	CMSS1	87	65.823	ENSFALG00000005816	CMSS1	100	65.823	Ficedula_albicollis
ENSPPYG00000013606	CMSS1	84	90.789	ENSFDAG00000012577	CMSS1	100	90.789	Fukomys_damarensis
ENSPPYG00000013606	CMSS1	83	60.606	ENSFHEG00000012008	cmss1	95	60.606	Fundulus_heteroclitus
ENSPPYG00000013606	CMSS1	99	50.515	ENSGMOG00000016729	cmss1	100	52.083	Gadus_morhua
ENSPPYG00000013606	CMSS1	95	64.259	ENSGALG00000015267	CMSS1	100	64.368	Gallus_gallus
ENSPPYG00000013606	CMSS1	76	63.768	ENSGAFG00000021217	cmss1	77	63.861	Gambusia_affinis
ENSPPYG00000013606	CMSS1	99	45.333	ENSGACG00000002798	cmss1	100	48.387	Gasterosteus_aculeatus
ENSPPYG00000013606	CMSS1	87	70.886	ENSGAGG00000019861	CMSS1	92	70.886	Gopherus_agassizii
ENSPPYG00000013606	CMSS1	95	97.287	ENSGGOG00000014125	CMSS1	99	97.287	Gorilla_gorilla
ENSPPYG00000013606	CMSS1	100	49.175	ENSHBUG00000008431	cmss1	100	49.828	Haplochromis_burtoni
ENSPPYG00000013606	CMSS1	93	84.585	ENSHGLG00000019481	CMSS1	100	84.585	Heterocephalus_glaber_female
ENSPPYG00000013606	CMSS1	94	84.825	ENSHGLG00100010314	CMSS1	100	84.825	Heterocephalus_glaber_male
ENSPPYG00000013606	CMSS1	100	53.716	ENSHCOG00000003222	cmss1	100	53.716	Hippocampus_comes
ENSPPYG00000013606	CMSS1	100	48.276	ENSIPUG00000011591	cmss1	100	48.311	Ictalurus_punctatus
ENSPPYG00000013606	CMSS1	100	89.247	ENSSTOG00000019366	CMSS1	100	89.247	Ictidomys_tridecemlineatus
ENSPPYG00000013606	CMSS1	100	83.871	ENSJJAG00000014894	Cmss1	100	83.871	Jaculus_jaculus
ENSPPYG00000013606	CMSS1	74	54.455	ENSKMAG00000002390	cmss1	81	54.455	Kryptolebias_marmoratus
ENSPPYG00000013606	CMSS1	81	53.333	ENSLBEG00000006298	cmss1	83	59.113	Labrus_bergylta
ENSPPYG00000013606	CMSS1	84	63.913	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSPPYG00000013606	CMSS1	100	51.590	ENSLOCG00000009391	cmss1	100	51.943	Lepisosteus_oculatus
ENSPPYG00000013606	CMSS1	84	90.789	ENSLAFG00000017509	CMSS1	100	90.789	Loxodonta_africana
ENSPPYG00000013606	CMSS1	100	96.057	ENSMFAG00000045006	CMSS1	100	96.057	Macaca_fascicularis
ENSPPYG00000013606	CMSS1	100	95.699	ENSMMUG00000002939	CMSS1	100	95.699	Macaca_mulatta
ENSPPYG00000013606	CMSS1	100	95.699	ENSMNEG00000031315	CMSS1	100	95.699	Macaca_nemestrina
ENSPPYG00000013606	CMSS1	100	95.341	ENSMLEG00000033660	CMSS1	100	95.341	Mandrillus_leucophaeus
ENSPPYG00000013606	CMSS1	100	51.645	ENSMAMG00000017176	cmss1	100	52.560	Mastacembelus_armatus
ENSPPYG00000013606	CMSS1	100	49.013	ENSMZEG00005021886	cmss1	100	49.671	Maylandia_zebra
ENSPPYG00000013606	CMSS1	84	69.298	ENSMGAG00000014360	CMSS1	100	69.298	Meleagris_gallopavo
ENSPPYG00000013606	CMSS1	100	60.573	ENSMAUG00000020609	Cmss1	100	60.573	Mesocricetus_auratus
ENSPPYG00000013606	CMSS1	100	91.039	ENSMICG00000048977	CMSS1	100	91.039	Microcebus_murinus
ENSPPYG00000013606	CMSS1	100	81.720	ENSMOCG00000021937	Cmss1	100	81.720	Microtus_ochrogaster
ENSPPYG00000013606	CMSS1	74	61.881	ENSMMOG00000019794	cmss1	95	57.082	Mola_mola
ENSPPYG00000013606	CMSS1	94	74.615	ENSMODG00000002275	CMSS1	97	74.615	Monodelphis_domestica
ENSPPYG00000013606	CMSS1	100	52.740	ENSMALG00000004250	cmss1	100	52.234	Monopterus_albus
ENSPPYG00000013606	CMSS1	100	82.143	MGP_CAROLIEiJ_G0020824	Cmss1	100	82.143	Mus_caroli
ENSPPYG00000013606	CMSS1	100	82.857	ENSMUSG00000022748	Cmss1	100	82.857	Mus_musculus
ENSPPYG00000013606	CMSS1	100	81.071	MGP_PahariEiJ_G0016524	Cmss1	100	81.071	Mus_pahari
ENSPPYG00000013606	CMSS1	100	82.143	MGP_SPRETEiJ_G0021724	Cmss1	100	82.143	Mus_spretus
ENSPPYG00000013606	CMSS1	94	92.607	ENSMPUG00000011324	CMSS1	99	92.607	Mustela_putorius_furo
ENSPPYG00000013606	CMSS1	96	90.875	ENSMLUG00000001131	CMSS1	100	90.875	Myotis_lucifugus
ENSPPYG00000013606	CMSS1	100	85.663	ENSNGAG00000020316	Cmss1	100	85.663	Nannospalax_galili
ENSPPYG00000013606	CMSS1	100	48.684	ENSNBRG00000003095	cmss1	100	49.671	Neolamprologus_brichardi
ENSPPYG00000013606	CMSS1	100	96.774	ENSNLEG00000034172	CMSS1	100	96.774	Nomascus_leucogenys
ENSPPYG00000013606	CMSS1	84	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSPPYG00000013606	CMSS1	100	90.681	ENSOPRG00000002986	CMSS1	100	90.681	Ochotona_princeps
ENSPPYG00000013606	CMSS1	100	69.534	ENSODEG00000009446	-	100	69.534	Octodon_degus
ENSPPYG00000013606	CMSS1	100	74.194	ENSODEG00000001853	-	100	74.194	Octodon_degus
ENSPPYG00000013606	CMSS1	100	80.783	ENSODEG00000003558	-	100	80.783	Octodon_degus
ENSPPYG00000013606	CMSS1	100	84.946	ENSODEG00000005226	-	100	84.946	Octodon_degus
ENSPPYG00000013606	CMSS1	74	60.891	ENSONIG00000006678	cmss1	88	55.144	Oreochromis_niloticus
ENSPPYG00000013606	CMSS1	94	73.077	ENSOANG00000007529	CMSS1	100	74.678	Ornithorhynchus_anatinus
ENSPPYG00000013606	CMSS1	95	91.085	ENSOCUG00000025366	CMSS1	93	91.085	Oryctolagus_cuniculus
ENSPPYG00000013606	CMSS1	100	52.055	ENSORLG00000020340	cmss1	100	52.055	Oryzias_latipes
ENSPPYG00000013606	CMSS1	84	54.585	ENSORLG00020012235	cmss1	99	54.077	Oryzias_latipes_hni
ENSPPYG00000013606	CMSS1	74	56.436	ENSORLG00015015551	cmss1	75	56.436	Oryzias_latipes_hsok
ENSPPYG00000013606	CMSS1	100	52.759	ENSOMEG00000012555	cmss1	100	53.633	Oryzias_melastigma
ENSPPYG00000013606	CMSS1	84	91.228	ENSOGAG00000002045	CMSS1	100	91.228	Otolemur_garnettii
ENSPPYG00000013606	CMSS1	96	86.692	ENSOARG00000017899	CMSS1	89	87.984	Ovis_aries
ENSPPYG00000013606	CMSS1	95	97.287	ENSPPAG00000038515	CMSS1	95	97.287	Pan_paniscus
ENSPPYG00000013606	CMSS1	100	91.756	ENSPPRG00000016767	CMSS1	100	91.756	Panthera_pardus
ENSPPYG00000013606	CMSS1	100	91.398	ENSPTIG00000018274	CMSS1	100	91.398	Panthera_tigris_altaica
ENSPPYG00000013606	CMSS1	100	96.057	ENSPTRG00000015157	CMSS1	100	97.143	Pan_troglodytes
ENSPPYG00000013606	CMSS1	95	92.248	ENSPANG00000019980	CMSS1	99	92.248	Papio_anubis
ENSPPYG00000013606	CMSS1	91	57.358	ENSPKIG00000012609	cmss1	97	57.576	Paramormyrops_kingsleyae
ENSPPYG00000013606	CMSS1	84	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSPPYG00000013606	CMSS1	81	57.965	ENSPMGG00000010286	cmss1	87	61.576	Periophthalmus_magnuspinnatus
ENSPPYG00000013606	CMSS1	100	83.214	ENSPEMG00000016384	Cmss1	100	83.214	Peromyscus_maniculatus_bairdii
ENSPPYG00000013606	CMSS1	75	51.961	ENSPMAG00000001146	cmss1	99	52.475	Petromyzon_marinus
ENSPPYG00000013606	CMSS1	96	72.180	ENSPCIG00000015656	CMSS1	100	72.180	Phascolarctos_cinereus
ENSPPYG00000013606	CMSS1	100	51.748	ENSPFOG00000016849	cmss1	100	52.098	Poecilia_formosa
ENSPPYG00000013606	CMSS1	100	52.265	ENSPLAG00000008323	cmss1	100	53.472	Poecilia_latipinna
ENSPPYG00000013606	CMSS1	100	50.820	ENSPMEG00000021020	cmss1	100	53.125	Poecilia_mexicana
ENSPPYG00000013606	CMSS1	85	59.322	ENSPREG00000007618	cmss1	69	62.871	Poecilia_reticulata
ENSPPYG00000013606	CMSS1	100	90.323	ENSPCOG00000020035	CMSS1	100	90.323	Propithecus_coquereli
ENSPPYG00000013606	CMSS1	100	77.419	ENSPVAG00000017031	CMSS1	100	77.419	Pteropus_vampyrus
ENSPPYG00000013606	CMSS1	91	49.281	ENSPNYG00000013428	cmss1	97	50.000	Pundamilia_nyererei
ENSPPYG00000013606	CMSS1	100	47.508	ENSPNAG00000007912	cmss1	100	48.173	Pygocentrus_nattereri
ENSPPYG00000013606	CMSS1	95	81.853	ENSRNOG00000027888	Cmss1	99	81.853	Rattus_norvegicus
ENSPPYG00000013606	CMSS1	100	94.265	ENSRBIG00000037931	CMSS1	100	94.265	Rhinopithecus_bieti
ENSPPYG00000013606	CMSS1	100	94.265	ENSRROG00000042910	CMSS1	100	94.265	Rhinopithecus_roxellana
ENSPPYG00000013606	CMSS1	95	92.720	ENSSBOG00000030980	CMSS1	99	93.436	Saimiri_boliviensis_boliviensis
ENSPPYG00000013606	CMSS1	91	75.397	ENSSHAG00000009321	CMSS1	99	75.397	Sarcophilus_harrisii
ENSPPYG00000013606	CMSS1	100	52.862	ENSSFOG00015001509	cmss1	100	55.172	Scleropages_formosus
ENSPPYG00000013606	CMSS1	100	51.546	ENSSMAG00000001653	cmss1	100	50.515	Scophthalmus_maximus
ENSPPYG00000013606	CMSS1	100	51.890	ENSSDUG00000007719	cmss1	100	53.767	Seriola_dumerili
ENSPPYG00000013606	CMSS1	76	62.802	ENSSLDG00000012300	cmss1	75	58.333	Seriola_lalandi_dorsalis
ENSPPYG00000013606	CMSS1	100	75.000	ENSSARG00000003584	CMSS1	100	75.000	Sorex_araneus
ENSPPYG00000013606	CMSS1	83	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSPPYG00000013606	CMSS1	75	63.592	ENSSPAG00000019182	cmss1	86	53.214	Stegastes_partitus
ENSPPYG00000013606	CMSS1	100	91.398	ENSSSCG00000011970	CMSS1	100	91.398	Sus_scrofa
ENSPPYG00000013606	CMSS1	84	66.812	ENSTGUG00000013635	CMSS1	100	66.812	Taeniopygia_guttata
ENSPPYG00000013606	CMSS1	100	51.056	ENSTRUG00000015265	cmss1	100	51.408	Takifugu_rubripes
ENSPPYG00000013606	CMSS1	74	56.436	ENSTNIG00000002880	cmss1	88	51.440	Tetraodon_nigroviridis
ENSPPYG00000013606	CMSS1	100	59.643	ENSTBEG00000016722	CMSS1	100	59.643	Tupaia_belangeri
ENSPPYG00000013606	CMSS1	100	87.455	ENSTTRG00000001562	CMSS1	100	87.455	Tursiops_truncatus
ENSPPYG00000013606	CMSS1	95	90.698	ENSUAMG00000024209	CMSS1	100	93.274	Ursus_americanus
ENSPPYG00000013606	CMSS1	95	90.698	ENSUMAG00000001983	CMSS1	100	89.961	Ursus_maritimus
ENSPPYG00000013606	CMSS1	100	67.742	ENSVPAG00000000263	CMSS1	100	67.742	Vicugna_pacos
ENSPPYG00000013606	CMSS1	79	91.667	ENSVVUG00000007776	-	85	91.667	Vulpes_vulpes
ENSPPYG00000013606	CMSS1	90	89.837	ENSVVUG00000021647	-	100	89.837	Vulpes_vulpes
ENSPPYG00000013606	CMSS1	100	53.763	ENSXETG00000011858	cmss1	100	53.763	Xenopus_tropicalis
ENSPPYG00000013606	CMSS1	76	63.942	ENSXCOG00000018724	cmss1	69	64.356	Xiphophorus_couchianus
ENSPPYG00000013606	CMSS1	76	63.942	ENSXMAG00000011243	cmss1	76	64.356	Xiphophorus_maculatus