EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000013676 (Gene tree)
Gene ID: 100462438
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 7426 bases
Position: chr3:60113105-60120530
Accession: 100462438
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000015290	PseudoU_synth_2	PF00849.22	6.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000015900	RPUSD3-201	2454	-	ENSPPYP00000015290	350 (aa)	XP_002813514	H2PA46

Gene Model

Click here to download ENSPPYG00000013676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000013676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000013676	RPUSD3	78	30.070	ENSPPYG00000004043	RPUSD4	71	30.070

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000013676	RPUSD3	100	96.011	ENSG00000156990	RPUSD3	100	96.011	Homo_sapiens
ENSPPYG00000013676	RPUSD3	99	80.516	ENSAMEG00000016227	RPUSD3	99	80.516	Ailuropoda_melanoleuca
ENSPPYG00000013676	RPUSD3	94	51.488	ENSACAG00000009836	RPUSD3	93	51.488	Anolis_carolinensis
ENSPPYG00000013676	RPUSD3	71	75.502	ENSANAG00000019945	-	94	75.502	Aotus_nancymaae
ENSPPYG00000013676	RPUSD3	53	87.568	ENSANAG00000038118	-	89	87.568	Aotus_nancymaae
ENSPPYG00000013676	RPUSD3	78	64.583	ENSANAG00000007127	-	98	64.583	Aotus_nancymaae
ENSPPYG00000013676	RPUSD3	98	81.686	ENSBTAG00000007968	RPUSD3	100	81.686	Bos_taurus
ENSPPYG00000013676	RPUSD3	100	80.398	ENSCAFG00000029733	RPUSD3	100	80.398	Canis_familiaris
ENSPPYG00000013676	RPUSD3	100	80.398	ENSCAFG00020008582	RPUSD3	100	80.398	Canis_lupus_dingo
ENSPPYG00000013676	RPUSD3	98	81.105	ENSCHIG00000026027	RPUSD3	100	81.105	Capra_hircus
ENSPPYG00000013676	RPUSD3	97	80.058	ENSTSYG00000009994	RPUSD3	99	80.058	Carlito_syrichta
ENSPPYG00000013676	RPUSD3	75	80.608	ENSCAPG00000017559	RPUSD3	99	80.608	Cavia_aperea
ENSPPYG00000013676	RPUSD3	99	68.103	ENSCPOG00000037956	RPUSD3	92	68.103	Cavia_porcellus
ENSPPYG00000013676	RPUSD3	100	88.319	ENSCCAG00000029530	RPUSD3	100	88.319	Cebus_capucinus
ENSPPYG00000013676	RPUSD3	100	92.308	ENSCATG00000036939	RPUSD3	100	92.308	Cercocebus_atys
ENSPPYG00000013676	RPUSD3	100	92.023	ENSCSAG00000010506	RPUSD3	100	92.023	Chlorocebus_sabaeus
ENSPPYG00000013676	RPUSD3	73	55.642	ENSCPBG00000008825	RPUSD3	95	53.307	Chrysemys_picta_bellii
ENSPPYG00000013676	RPUSD3	100	91.738	ENSCANG00000040711	RPUSD3	100	91.738	Colobus_angolensis_palliatus
ENSPPYG00000013676	RPUSD3	99	72.046	ENSCGRG00001004923	Rpusd3	96	72.046	Cricetulus_griseus_chok1gshd
ENSPPYG00000013676	RPUSD3	95	73.887	ENSCGRG00000018315	Rpusd3	98	73.887	Cricetulus_griseus_crigri
ENSPPYG00000013676	RPUSD3	99	76.791	ENSDNOG00000039160	RPUSD3	92	76.791	Dasypus_novemcinctus
ENSPPYG00000013676	RPUSD3	74	79.245	ENSDORG00000026827	Rpusd3	92	79.104	Dipodomys_ordii
ENSPPYG00000013676	RPUSD3	99	73.066	ENSETEG00000006538	RPUSD3	99	73.066	Echinops_telfairi
ENSPPYG00000013676	RPUSD3	58	40.291	ENSEBUG00000015605	RPUSD3	67	40.291	Eptatretus_burgeri
ENSPPYG00000013676	RPUSD3	100	80.398	ENSEASG00005014160	RPUSD3	98	80.398	Equus_asinus_asinus
ENSPPYG00000013676	RPUSD3	100	81.534	ENSECAG00000019988	RPUSD3	98	81.534	Equus_caballus
ENSPPYG00000013676	RPUSD3	99	56.056	ENSEEUG00000007353	RPUSD3	100	56.056	Erinaceus_europaeus
ENSPPYG00000013676	RPUSD3	99	81.948	ENSFCAG00000014199	RPUSD3	99	81.948	Felis_catus
ENSPPYG00000013676	RPUSD3	77	51.648	ENSFALG00000012968	RPUSD3	99	49.084	Ficedula_albicollis
ENSPPYG00000013676	RPUSD3	75	83.270	ENSFDAG00000008350	RPUSD3	81	83.270	Fukomys_damarensis
ENSPPYG00000013676	RPUSD3	75	54.373	ENSGAGG00000007493	RPUSD3	82	53.232	Gopherus_agassizii
ENSPPYG00000013676	RPUSD3	100	96.296	ENSGGOG00000013120	RPUSD3	100	96.296	Gorilla_gorilla
ENSPPYG00000013676	RPUSD3	95	66.667	ENSHGLG00000011722	RPUSD3	97	66.667	Heterocephalus_glaber_female
ENSPPYG00000013676	RPUSD3	95	66.667	ENSHGLG00100016038	RPUSD3	97	66.667	Heterocephalus_glaber_male
ENSPPYG00000013676	RPUSD3	100	77.557	ENSSTOG00000002125	RPUSD3	100	77.557	Ictidomys_tridecemlineatus
ENSPPYG00000013676	RPUSD3	95	73.235	ENSJJAG00000012679	Rpusd3	99	73.235	Jaculus_jaculus
ENSPPYG00000013676	RPUSD3	97	82.405	ENSLAFG00000017501	RPUSD3	99	82.405	Loxodonta_africana
ENSPPYG00000013676	RPUSD3	100	92.023	ENSMFAG00000032407	RPUSD3	100	92.023	Macaca_fascicularis
ENSPPYG00000013676	RPUSD3	100	88.034	ENSMMUG00000010628	RPUSD3	97	94.212	Macaca_mulatta
ENSPPYG00000013676	RPUSD3	100	91.738	ENSMNEG00000040308	RPUSD3	100	91.738	Macaca_nemestrina
ENSPPYG00000013676	RPUSD3	100	92.308	ENSMLEG00000033940	RPUSD3	100	92.308	Mandrillus_leucophaeus
ENSPPYG00000013676	RPUSD3	95	75.000	ENSMAUG00000015473	Rpusd3	99	75.000	Mesocricetus_auratus
ENSPPYG00000013676	RPUSD3	97	82.698	ENSMICG00000002315	RPUSD3	99	82.698	Microcebus_murinus
ENSPPYG00000013676	RPUSD3	97	72.727	ENSMOCG00000022613	Rpusd3	99	72.727	Microtus_ochrogaster
ENSPPYG00000013676	RPUSD3	97	57.061	ENSMODG00000005210	RPUSD3	90	57.061	Monodelphis_domestica
ENSPPYG00000013676	RPUSD3	98	72.674	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.674	Mus_caroli
ENSPPYG00000013676	RPUSD3	98	72.965	ENSMUSG00000051169	Rpusd3	100	72.965	Mus_musculus
ENSPPYG00000013676	RPUSD3	98	73.256	MGP_PahariEiJ_G0022476	Rpusd3	100	73.256	Mus_pahari
ENSPPYG00000013676	RPUSD3	98	72.674	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.674	Mus_spretus
ENSPPYG00000013676	RPUSD3	100	78.977	ENSMPUG00000017132	RPUSD3	100	78.977	Mustela_putorius_furo
ENSPPYG00000013676	RPUSD3	98	84.393	ENSMLUG00000006135	RPUSD3	99	84.393	Myotis_lucifugus
ENSPPYG00000013676	RPUSD3	95	75.375	ENSNGAG00000023704	Rpusd3	97	75.375	Nannospalax_galili
ENSPPYG00000013676	RPUSD3	100	80.571	ENSNLEG00000004214	RPUSD3	95	97.015	Nomascus_leucogenys
ENSPPYG00000013676	RPUSD3	74	67.050	ENSMEUG00000013098	-	100	67.050	Notamacropus_eugenii
ENSPPYG00000013676	RPUSD3	97	64.223	ENSOPRG00000002300	RPUSD3	97	64.223	Ochotona_princeps
ENSPPYG00000013676	RPUSD3	75	78.788	ENSODEG00000018137	RPUSD3	91	78.788	Octodon_degus
ENSPPYG00000013676	RPUSD3	81	51.408	ENSOANG00000012081	-	99	51.408	Ornithorhynchus_anatinus
ENSPPYG00000013676	RPUSD3	98	69.914	ENSOCUG00000027885	RPUSD3	100	69.914	Oryctolagus_cuniculus
ENSPPYG00000013676	RPUSD3	88	85.852	ENSOGAG00000012592	RPUSD3	99	85.852	Otolemur_garnettii
ENSPPYG00000013676	RPUSD3	99	81.481	ENSOARG00000005928	RPUSD3	99	81.481	Ovis_aries
ENSPPYG00000013676	RPUSD3	100	96.011	ENSPPAG00000038083	RPUSD3	100	96.011	Pan_paniscus
ENSPPYG00000013676	RPUSD3	99	81.948	ENSPPRG00000024433	RPUSD3	99	81.948	Panthera_pardus
ENSPPYG00000013676	RPUSD3	97	83.284	ENSPTIG00000006828	RPUSD3	99	83.284	Panthera_tigris_altaica
ENSPPYG00000013676	RPUSD3	100	96.296	ENSPTRG00000051760	RPUSD3	100	96.296	Pan_troglodytes
ENSPPYG00000013676	RPUSD3	100	92.593	ENSPANG00000023885	RPUSD3	100	92.593	Papio_anubis
ENSPPYG00000013676	RPUSD3	98	73.256	ENSPEMG00000017245	Rpusd3	100	73.256	Peromyscus_maniculatus_bairdii
ENSPPYG00000013676	RPUSD3	96	59.644	ENSPCIG00000021901	RPUSD3	96	59.644	Phascolarctos_cinereus
ENSPPYG00000013676	RPUSD3	82	60.900	ENSPCAG00000013731	-	100	60.900	Procavia_capensis
ENSPPYG00000013676	RPUSD3	99	85.960	ENSPCOG00000018314	RPUSD3	99	85.960	Propithecus_coquereli
ENSPPYG00000013676	RPUSD3	99	80.516	ENSPVAG00000011107	RPUSD3	99	80.516	Pteropus_vampyrus
ENSPPYG00000013676	RPUSD3	98	68.895	ENSRNOG00000009084	Rpusd3	100	68.895	Rattus_norvegicus
ENSPPYG00000013676	RPUSD3	100	92.308	ENSRBIG00000041230	RPUSD3	100	92.308	Rhinopithecus_bieti
ENSPPYG00000013676	RPUSD3	100	92.593	ENSRROG00000043328	RPUSD3	100	92.593	Rhinopithecus_roxellana
ENSPPYG00000013676	RPUSD3	100	88.034	ENSSBOG00000036106	RPUSD3	100	88.034	Saimiri_boliviensis_boliviensis
ENSPPYG00000013676	RPUSD3	87	60.390	ENSSHAG00000015536	RPUSD3	99	60.390	Sarcophilus_harrisii
ENSPPYG00000013676	RPUSD3	100	81.250	ENSSSCG00000011555	RPUSD3	100	81.250	Sus_scrofa
ENSPPYG00000013676	RPUSD3	66	53.219	ENSTGUG00000008744	RPUSD3	93	52.995	Taeniopygia_guttata
ENSPPYG00000013676	RPUSD3	82	77.163	ENSTBEG00000000176	RPUSD3	100	77.163	Tupaia_belangeri
ENSPPYG00000013676	RPUSD3	100	80.682	ENSTTRG00000007544	RPUSD3	100	80.682	Tursiops_truncatus
ENSPPYG00000013676	RPUSD3	88	81.994	ENSUAMG00000011354	RPUSD3	97	81.994	Ursus_americanus
ENSPPYG00000013676	RPUSD3	99	79.943	ENSUMAG00000018830	RPUSD3	99	79.943	Ursus_maritimus
ENSPPYG00000013676	RPUSD3	97	82.405	ENSVVUG00000023735	RPUSD3	99	82.405	Vulpes_vulpes
ENSPPYG00000013676	RPUSD3	79	49.822	ENSXETG00000023546	rpusd3	99	49.822	Xenopus_tropicalis