EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000014425 (Gene tree)
Gene ID: -
Gene Symbol: LSG1
Alias: FLJ11301
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 27872 bases
Position: chr3:198650450-198678321
Accession: 25652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000016135	MMR_HSR1	PF01926.23	3.8e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000016780	LSG1-201	1964	-	ENSPPYP00000016135	605 (aa)	-	H2PCE6

Gene Model

Click here to download ENSPPYG00000014425's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000014425's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000014425	LSG1	100	94.399	ENSG00000041802	LSG1	98	98.276	Homo_sapiens
ENSPPYG00000014425	LSG1	100	63.322	ENSAPOG00000009694	lsg1	92	64.204	Acanthochromis_polyacanthus
ENSPPYG00000014425	LSG1	100	81.117	ENSAMEG00000009343	LSG1	92	81.117	Ailuropoda_melanoleuca
ENSPPYG00000014425	LSG1	98	63.682	ENSACIG00000012406	lsg1	92	63.967	Amphilophus_citrinellus
ENSPPYG00000014425	LSG1	100	63.487	ENSAOCG00000016066	lsg1	92	64.309	Amphiprion_ocellaris
ENSPPYG00000014425	LSG1	100	64.145	ENSAPEG00000003252	lsg1	92	64.145	Amphiprion_percula
ENSPPYG00000014425	LSG1	98	63.926	ENSATEG00000011794	lsg1	99	64.426	Anabas_testudineus
ENSPPYG00000014425	LSG1	95	65.917	ENSACAG00000004222	LSG1	91	65.917	Anolis_carolinensis
ENSPPYG00000014425	LSG1	100	92.422	ENSANAG00000021153	LSG1	92	93.245	Aotus_nancymaae
ENSPPYG00000014425	LSG1	100	62.175	ENSACLG00000000520	lsg1	92	62.825	Astatotilapia_calliptera
ENSPPYG00000014425	LSG1	100	61.129	ENSAMXG00000008271	lsg1	92	61.935	Astyanax_mexicanus
ENSPPYG00000014425	LSG1	100	84.020	ENSBTAG00000008461	LSG1	92	84.020	Bos_taurus
ENSPPYG00000014425	LSG1	80	51.832	WBGene00016907	C53H9.2	95	58.871	Caenorhabditis_elegans
ENSPPYG00000014425	LSG1	100	91.433	ENSCJAG00000013962	LSG1	92	92.257	Callithrix_jacchus
ENSPPYG00000014425	LSG1	95	83.652	ENSCAFG00000013445	LSG1	92	83.652	Canis_familiaris
ENSPPYG00000014425	LSG1	100	82.324	ENSCAFG00020002216	LSG1	92	83.246	Canis_lupus_dingo
ENSPPYG00000014425	LSG1	100	81.908	ENSCHIG00000015769	LSG1	92	83.224	Capra_hircus
ENSPPYG00000014425	LSG1	100	86.349	ENSTSYG00000001447	LSG1	92	87.171	Carlito_syrichta
ENSPPYG00000014425	LSG1	95	74.653	ENSCAPG00000009856	LSG1	92	75.563	Cavia_aperea
ENSPPYG00000014425	LSG1	100	90.445	ENSCCAG00000035744	LSG1	92	91.269	Cebus_capucinus
ENSPPYG00000014425	LSG1	100	93.904	ENSCATG00000042060	LSG1	92	92.916	Cercocebus_atys
ENSPPYG00000014425	LSG1	100	94.728	ENSCSAG00000008796	LSG1	85	95.717	Chlorocebus_sabaeus
ENSPPYG00000014425	LSG1	100	67.370	ENSCPBG00000015941	LSG1	77	68.344	Chrysemys_picta_bellii
ENSPPYG00000014425	LSG1	71	63.684	ENSCING00000007079	-	91	63.684	Ciona_intestinalis
ENSPPYG00000014425	LSG1	73	62.944	ENSCSAVG00000002514	-	88	63.265	Ciona_savignyi
ENSPPYG00000014425	LSG1	100	94.069	ENSCANG00000030709	LSG1	92	95.058	Colobus_angolensis_palliatus
ENSPPYG00000014425	LSG1	100	81.117	ENSCGRG00001019846	Lsg1	92	81.281	Cricetulus_griseus_chok1gshd
ENSPPYG00000014425	LSG1	100	81.117	ENSCGRG00000014617	Lsg1	92	81.281	Cricetulus_griseus_crigri
ENSPPYG00000014425	LSG1	98	63.423	ENSCSEG00000008522	lsg1	92	62.890	Cynoglossus_semilaevis
ENSPPYG00000014425	LSG1	97	66.271	ENSCVAG00000002484	lsg1	92	66.338	Cyprinodon_variegatus
ENSPPYG00000014425	LSG1	100	65.512	ENSDARG00000015352	lsg1	92	66.007	Danio_rerio
ENSPPYG00000014425	LSG1	100	83.633	ENSDNOG00000006224	LSG1	92	83.633	Dasypus_novemcinctus
ENSPPYG00000014425	LSG1	80	57.377	FBgn0266284	Ns3	90	48.675	Drosophila_melanogaster
ENSPPYG00000014425	LSG1	87	86.667	ENSETEG00000003888	LSG1	82	86.667	Echinops_telfairi
ENSPPYG00000014425	LSG1	88	57.404	ENSEBUG00000003119	lsg1	77	56.909	Eptatretus_burgeri
ENSPPYG00000014425	LSG1	100	83.882	ENSEASG00005000678	LSG1	92	85.033	Equus_asinus_asinus
ENSPPYG00000014425	LSG1	100	84.211	ENSECAG00000017659	LSG1	92	85.362	Equus_caballus
ENSPPYG00000014425	LSG1	86	71.554	ENSEEUG00000015217	LSG1	79	71.772	Erinaceus_europaeus
ENSPPYG00000014425	LSG1	100	62.376	ENSELUG00000023973	lsg1	91	61.716	Esox_lucius
ENSPPYG00000014425	LSG1	100	84.704	ENSFCAG00000024957	LSG1	92	84.704	Felis_catus
ENSPPYG00000014425	LSG1	99	61.944	ENSFALG00000007210	LSG1	92	62.500	Ficedula_albicollis
ENSPPYG00000014425	LSG1	100	76.403	ENSFDAG00000017373	LSG1	92	77.100	Fukomys_damarensis
ENSPPYG00000014425	LSG1	97	62.752	ENSFHEG00000003680	lsg1	92	62.602	Fundulus_heteroclitus
ENSPPYG00000014425	LSG1	98	60.067	ENSGMOG00000015834	lsg1	92	59.672	Gadus_morhua
ENSPPYG00000014425	LSG1	100	63.011	ENSGALG00000007058	LSG1	86	64.262	Gallus_gallus
ENSPPYG00000014425	LSG1	97	65.025	ENSGAFG00000015831	lsg1	92	64.793	Gambusia_affinis
ENSPPYG00000014425	LSG1	98	61.231	ENSGACG00000009323	lsg1	92	60.912	Gasterosteus_aculeatus
ENSPPYG00000014425	LSG1	100	94.563	ENSGGOG00000000520	LSG1	92	95.552	Gorilla_gorilla
ENSPPYG00000014425	LSG1	100	62.582	ENSHBUG00000005659	lsg1	92	63.235	Haplochromis_burtoni
ENSPPYG00000014425	LSG1	100	74.754	ENSHGLG00000017390	LSG1	92	75.450	Heterocephalus_glaber_female
ENSPPYG00000014425	LSG1	100	74.754	ENSHGLG00100018587	LSG1	92	75.450	Heterocephalus_glaber_male
ENSPPYG00000014425	LSG1	97	62.584	ENSHCOG00000016848	lsg1	92	62.582	Hippocampus_comes
ENSPPYG00000014425	LSG1	100	64.521	ENSIPUG00000008631	lsg1	92	64.356	Ictalurus_punctatus
ENSPPYG00000014425	LSG1	88	79.446	ENSSTOG00000010234	LSG1	90	81.336	Ictidomys_tridecemlineatus
ENSPPYG00000014425	LSG1	100	78.069	ENSJJAG00000015513	Lsg1	92	78.887	Jaculus_jaculus
ENSPPYG00000014425	LSG1	98	62.563	ENSKMAG00000009681	lsg1	92	62.541	Kryptolebias_marmoratus
ENSPPYG00000014425	LSG1	98	61.655	ENSLBEG00000024261	lsg1	92	61.818	Labrus_bergylta
ENSPPYG00000014425	LSG1	100	63.948	ENSLACG00000013399	LSG1	92	64.600	Latimeria_chalumnae
ENSPPYG00000014425	LSG1	98	66.443	ENSLOCG00000004918	lsg1	92	66.066	Lepisosteus_oculatus
ENSPPYG00000014425	LSG1	100	82.566	ENSLAFG00000012919	-	92	82.566	Loxodonta_africana
ENSPPYG00000014425	LSG1	100	94.563	ENSMFAG00000039903	LSG1	92	93.410	Macaca_fascicularis
ENSPPYG00000014425	LSG1	100	95.717	ENSMMUG00000010708	LSG1	92	95.717	Macaca_mulatta
ENSPPYG00000014425	LSG1	100	94.399	ENSMNEG00000031538	LSG1	92	93.245	Macaca_nemestrina
ENSPPYG00000014425	LSG1	100	94.563	ENSMLEG00000041184	LSG1	92	95.552	Mandrillus_leucophaeus
ENSPPYG00000014425	LSG1	100	60.691	ENSMAMG00000000470	lsg1	92	60.691	Mastacembelus_armatus
ENSPPYG00000014425	LSG1	100	62.237	ENSMZEG00005017865	lsg1	92	62.885	Maylandia_zebra
ENSPPYG00000014425	LSG1	88	64.804	ENSMGAG00000007050	LSG1	91	65.549	Meleagris_gallopavo
ENSPPYG00000014425	LSG1	99	79.636	ENSMAUG00000016976	Lsg1	93	80.960	Mesocricetus_auratus
ENSPPYG00000014425	LSG1	100	85.855	ENSMICG00000049087	LSG1	92	85.855	Microcebus_murinus
ENSPPYG00000014425	LSG1	100	79.344	ENSMOCG00000022136	Lsg1	92	79.672	Microtus_ochrogaster
ENSPPYG00000014425	LSG1	82	72.951	ENSMMOG00000008884	lsg1	91	67.247	Mola_mola
ENSPPYG00000014425	LSG1	99	57.869	ENSMODG00000019828	LSG1	92	58.525	Monodelphis_domestica
ENSPPYG00000014425	LSG1	100	79.703	MGP_CAROLIEiJ_G0020648	Lsg1	92	80.890	Mus_caroli
ENSPPYG00000014425	LSG1	100	80.033	ENSMUSG00000022538	Lsg1	92	80.890	Mus_musculus
ENSPPYG00000014425	LSG1	98	79.866	MGP_PahariEiJ_G0016352	Lsg1	92	80.757	Mus_pahari
ENSPPYG00000014425	LSG1	100	79.703	MGP_SPRETEiJ_G0021544	Lsg1	92	80.890	Mus_spretus
ENSPPYG00000014425	LSG1	100	82.895	ENSMPUG00000003734	LSG1	92	82.895	Mustela_putorius_furo
ENSPPYG00000014425	LSG1	100	83.415	ENSMLUG00000012548	LSG1	92	84.236	Myotis_lucifugus
ENSPPYG00000014425	LSG1	100	79.770	ENSNGAG00000021872	Lsg1	92	80.624	Nannospalax_galili
ENSPPYG00000014425	LSG1	100	94.234	ENSNLEG00000008293	LSG1	92	95.222	Nomascus_leucogenys
ENSPPYG00000014425	LSG1	66	68.852	ENSMEUG00000009041	-	75	68.852	Notamacropus_eugenii
ENSPPYG00000014425	LSG1	100	62.418	ENSONIG00000002635	lsg1	92	63.005	Oreochromis_niloticus
ENSPPYG00000014425	LSG1	95	71.354	ENSOANG00000012742	LSG1	91	71.354	Ornithorhynchus_anatinus
ENSPPYG00000014425	LSG1	100	83.388	ENSOCUG00000004817	LSG1	92	84.539	Oryctolagus_cuniculus
ENSPPYG00000014425	LSG1	98	63.514	ENSORLG00000007695	lsg1	92	62.975	Oryzias_latipes
ENSPPYG00000014425	LSG1	98	62.901	ENSORLG00020016286	lsg1	92	62.376	Oryzias_latipes_hni
ENSPPYG00000014425	LSG1	98	63.682	ENSORLG00015012025	lsg1	92	62.975	Oryzias_latipes_hsok
ENSPPYG00000014425	LSG1	98	61.383	ENSOMEG00000022379	lsg1	92	61.221	Oryzias_melastigma
ENSPPYG00000014425	LSG1	100	85.434	ENSOGAG00000003475	LSG1	92	85.434	Otolemur_garnettii
ENSPPYG00000014425	LSG1	100	83.553	ENSOARG00000020403	LSG1	92	83.553	Ovis_aries
ENSPPYG00000014425	LSG1	100	95.058	ENSPPAG00000029271	LSG1	92	95.058	Pan_paniscus
ENSPPYG00000014425	LSG1	100	84.228	ENSPPRG00000010281	LSG1	92	84.228	Panthera_pardus
ENSPPYG00000014425	LSG1	100	85.033	ENSPTIG00000010789	LSG1	92	85.033	Panthera_tigris_altaica
ENSPPYG00000014425	LSG1	100	95.058	ENSPTRG00000015760	LSG1	92	95.058	Pan_troglodytes
ENSPPYG00000014425	LSG1	100	94.234	ENSPANG00000018249	LSG1	92	93.245	Papio_anubis
ENSPPYG00000014425	LSG1	96	63.761	ENSPKIG00000002895	lsg1	92	62.890	Paramormyrops_kingsleyae
ENSPPYG00000014425	LSG1	96	64.189	ENSPSIG00000009821	LSG1	92	64.189	Pelodiscus_sinensis
ENSPPYG00000014425	LSG1	95	63.715	ENSPMGG00000000931	lsg1	91	63.715	Periophthalmus_magnuspinnatus
ENSPPYG00000014425	LSG1	100	80.492	ENSPEMG00000012082	-	92	80.492	Peromyscus_maniculatus_bairdii
ENSPPYG00000014425	LSG1	100	59.248	ENSPMAG00000007451	lsg1	92	59.248	Petromyzon_marinus
ENSPPYG00000014425	LSG1	100	64.789	ENSPCIG00000013890	LSG1	76	64.789	Phascolarctos_cinereus
ENSPPYG00000014425	LSG1	97	64.983	ENSPFOG00000021882	lsg1	92	64.918	Poecilia_formosa
ENSPPYG00000014425	LSG1	97	63.973	ENSPLAG00000019536	lsg1	92	63.934	Poecilia_latipinna
ENSPPYG00000014425	LSG1	97	64.094	ENSPMEG00000017281	lsg1	92	64.052	Poecilia_mexicana
ENSPPYG00000014425	LSG1	97	53.744	ENSPREG00000006048	lsg1	92	53.698	Poecilia_reticulata
ENSPPYG00000014425	LSG1	89	88.000	ENSPCAG00000005511	LSG1	82	88.000	Procavia_capensis
ENSPPYG00000014425	LSG1	100	86.184	ENSPCOG00000012360	LSG1	92	87.007	Propithecus_coquereli
ENSPPYG00000014425	LSG1	100	62.175	ENSPNYG00000021994	lsg1	92	62.825	Pundamilia_nyererei
ENSPPYG00000014425	LSG1	100	64.553	ENSPNAG00000015533	lsg1	92	64.553	Pygocentrus_nattereri
ENSPPYG00000014425	LSG1	100	79.214	ENSRNOG00000001727	Lsg1	92	81.209	Rattus_norvegicus
ENSPPYG00000014425	LSG1	100	93.410	ENSRBIG00000029053	LSG1	92	94.399	Rhinopithecus_bieti
ENSPPYG00000014425	LSG1	100	93.410	ENSRROG00000037702	LSG1	92	94.399	Rhinopithecus_roxellana
ENSPPYG00000014425	LSG1	71	58.084	YGL099W	LSG1	68	58.084	Saccharomyces_cerevisiae
ENSPPYG00000014425	LSG1	100	91.928	ENSSBOG00000034938	LSG1	92	92.751	Saimiri_boliviensis_boliviensis
ENSPPYG00000014425	LSG1	75	67.672	ENSSHAG00000003487	LSG1	90	67.941	Sarcophilus_harrisii
ENSPPYG00000014425	LSG1	98	62.732	ENSSFOG00015008955	lsg1	92	62.336	Scleropages_formosus
ENSPPYG00000014425	LSG1	98	62.479	ENSSDUG00000004622	lsg1	92	62.621	Seriola_dumerili
ENSPPYG00000014425	LSG1	98	62.500	ENSSLDG00000010869	lsg1	92	62.479	Seriola_lalandi_dorsalis
ENSPPYG00000014425	LSG1	80	80.345	ENSSARG00000012981	LSG1	76	79.545	Sorex_araneus
ENSPPYG00000014425	LSG1	100	65.691	ENSSPUG00000016347	LSG1	92	65.691	Sphenodon_punctatus
ENSPPYG00000014425	LSG1	100	61.184	ENSSPAG00000005508	lsg1	92	62.171	Stegastes_partitus
ENSPPYG00000014425	LSG1	100	83.196	ENSSSCG00000011827	LSG1	92	83.196	Sus_scrofa
ENSPPYG00000014425	LSG1	88	62.385	ENSTGUG00000009068	LSG1	91	63.043	Taeniopygia_guttata
ENSPPYG00000014425	LSG1	97	60.441	ENSTRUG00000017380	lsg1	92	60.165	Takifugu_rubripes
ENSPPYG00000014425	LSG1	97	63.025	ENSTNIG00000015570	lsg1	92	63.651	Tetraodon_nigroviridis
ENSPPYG00000014425	LSG1	89	84.658	ENSTTRG00000000559	LSG1	82	84.658	Tursiops_truncatus
ENSPPYG00000014425	LSG1	100	82.566	ENSUAMG00000012454	LSG1	99	83.526	Ursus_americanus
ENSPPYG00000014425	LSG1	100	82.566	ENSUMAG00000000855	LSG1	92	82.566	Ursus_maritimus
ENSPPYG00000014425	LSG1	95	79.094	ENSVPAG00000012400	LSG1	92	79.094	Vicugna_pacos
ENSPPYG00000014425	LSG1	95	82.609	ENSVVUG00000008956	LSG1	92	80.066	Vulpes_vulpes
ENSPPYG00000014425	LSG1	100	65.132	ENSXETG00000003451	lsg1	93	65.625	Xenopus_tropicalis
ENSPPYG00000014425	LSG1	97	63.833	ENSXCOG00000003239	lsg1	92	63.636	Xiphophorus_couchianus
ENSPPYG00000014425	LSG1	97	65.042	ENSXMAG00000005536	lsg1	92	63.802	Xiphophorus_maculatus