EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000014996 (Gene tree)
Gene ID: 100453663
Gene Symbol: GAR1
Alias: NOLA1
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 9883 bases
Position: chr4:114490934-114500816
Accession: 100453663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000016749	Gar1	PF04410.14	6.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000017429	GAR1-201	1834	-	ENSPPYP00000016749	217 (aa)	XP_002815102	A0A2J8XQ76

Gene Model

Click here to download ENSPPYG00000014996's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000014996's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000014996	GAR1	100	99.539	ENSG00000109534	GAR1	100	99.539	Homo_sapiens
ENSPPYG00000014996	GAR1	50	98.165	ENSAMEG00000004605	GAR1	53	98.165	Ailuropoda_melanoleuca
ENSPPYG00000014996	GAR1	100	98.624	ENSANAG00000021608	GAR1	100	98.624	Aotus_nancymaae
ENSPPYG00000014996	GAR1	50	99.083	ENSBTAG00000000748	GAR1	52	99.083	Bos_taurus
ENSPPYG00000014996	GAR1	100	98.165	ENSCJAG00000004041	GAR1	100	98.165	Callithrix_jacchus
ENSPPYG00000014996	GAR1	51	99.091	ENSCHIG00000016026	-	52	99.083	Capra_hircus
ENSPPYG00000014996	GAR1	50	100.000	ENSTSYG00000013668	-	51	100.000	Carlito_syrichta
ENSPPYG00000014996	GAR1	50	91.743	ENSTSYG00000026632	-	56	91.743	Carlito_syrichta
ENSPPYG00000014996	GAR1	51	99.091	ENSCPOG00000004216	GAR1	50	99.083	Cavia_porcellus
ENSPPYG00000014996	GAR1	100	98.624	ENSCCAG00000029372	GAR1	100	98.624	Cebus_capucinus
ENSPPYG00000014996	GAR1	100	99.078	ENSCATG00000021854	GAR1	100	99.078	Cercocebus_atys
ENSPPYG00000014996	GAR1	51	97.273	ENSCLAG00000005335	GAR1	69	98.182	Chinchilla_lanigera
ENSPPYG00000014996	GAR1	90	97.436	ENSCSAG00000003922	GAR1	98	97.436	Chlorocebus_sabaeus
ENSPPYG00000014996	GAR1	53	98.276	ENSCHOG00000007484	-	51	98.276	Choloepus_hoffmanni
ENSPPYG00000014996	GAR1	100	98.157	ENSCANG00000039262	GAR1	100	98.157	Colobus_angolensis_palliatus
ENSPPYG00000014996	GAR1	50	99.083	ENSDNOG00000037632	GAR1	55	99.083	Dasypus_novemcinctus
ENSPPYG00000014996	GAR1	66	92.361	ENSDORG00000000482	Gar1	50	96.330	Dipodomys_ordii
ENSPPYG00000014996	GAR1	51	98.182	ENSEASG00005004658	GAR1	50	98.165	Equus_asinus_asinus
ENSPPYG00000014996	GAR1	51	99.091	ENSECAG00000013624	GAR1	55	99.083	Equus_caballus
ENSPPYG00000014996	GAR1	50	99.083	ENSFCAG00000040791	-	52	99.083	Felis_catus
ENSPPYG00000014996	GAR1	59	60.000	ENSFCAG00000025841	-	57	63.866	Felis_catus
ENSPPYG00000014996	GAR1	51	91.892	ENSFHEG00000008068	gar1	50	93.458	Fundulus_heteroclitus
ENSPPYG00000014996	GAR1	100	99.078	ENSGGOG00000008681	GAR1	100	99.078	Gorilla_gorilla
ENSPPYG00000014996	GAR1	51	80.180	ENSGGOG00000036205	-	54	80.734	Gorilla_gorilla
ENSPPYG00000014996	GAR1	62	84.444	ENSIPUG00000003194	gar1	51	91.589	Ictalurus_punctatus
ENSPPYG00000014996	GAR1	50	97.248	ENSSTOG00000005577	GAR1	71	96.364	Ictidomys_tridecemlineatus
ENSPPYG00000014996	GAR1	51	89.189	ENSKMAG00000010402	gar1	51	91.589	Kryptolebias_marmoratus
ENSPPYG00000014996	GAR1	79	84.298	ENSLACG00000003306	GAR1	65	87.037	Latimeria_chalumnae
ENSPPYG00000014996	GAR1	50	84.259	ENSMFAG00000003572	-	53	83.486	Macaca_fascicularis
ENSPPYG00000014996	GAR1	100	99.078	ENSMFAG00000024592	GAR1	100	99.078	Macaca_fascicularis
ENSPPYG00000014996	GAR1	100	99.078	ENSMMUG00000021225	GAR1	100	99.078	Macaca_mulatta
ENSPPYG00000014996	GAR1	100	99.078	ENSMNEG00000042594	GAR1	100	99.078	Macaca_nemestrina
ENSPPYG00000014996	GAR1	99	98.605	ENSMLEG00000002496	GAR1	99	98.605	Mandrillus_leucophaeus
ENSPPYG00000014996	GAR1	50	96.330	ENSMAUG00000016788	Gar1	70	98.182	Mesocricetus_auratus
ENSPPYG00000014996	GAR1	52	98.214	ENSMICG00000003326	GAR1	50	99.083	Microcebus_murinus
ENSPPYG00000014996	GAR1	50	95.413	ENSMOCG00000001340	Gar1	70	100.000	Microtus_ochrogaster
ENSPPYG00000014996	GAR1	69	75.168	ENSMALG00000009672	gar1	68	83.562	Monopterus_albus
ENSPPYG00000014996	GAR1	50	96.330	MGP_CAROLIEiJ_G0025627	Gar1	70	100.000	Mus_caroli
ENSPPYG00000014996	GAR1	51	96.364	ENSMUSG00000028010	Gar1	70	100.000	Mus_musculus
ENSPPYG00000014996	GAR1	51	98.182	MGP_PahariEiJ_G0027076	Gar1	70	100.000	Mus_pahari
ENSPPYG00000014996	GAR1	51	96.364	MGP_SPRETEiJ_G0026580	Gar1	70	100.000	Mus_spretus
ENSPPYG00000014996	GAR1	100	92.727	ENSMPUG00000008615	GAR1	52	99.083	Mustela_putorius_furo
ENSPPYG00000014996	GAR1	100	93.750	ENSMLUG00000003776	GAR1	100	93.750	Myotis_lucifugus
ENSPPYG00000014996	GAR1	51	98.182	ENSNGAG00000008268	Gar1	99	96.104	Nannospalax_galili
ENSPPYG00000014996	GAR1	51	83.784	ENSNLEG00000034282	-	55	83.486	Nomascus_leucogenys
ENSPPYG00000014996	GAR1	100	97.696	ENSNLEG00000016578	GAR1	100	97.696	Nomascus_leucogenys
ENSPPYG00000014996	GAR1	50	99.083	ENSOCUG00000003901	GAR1	51	99.083	Oryctolagus_cuniculus
ENSPPYG00000014996	GAR1	50	99.083	ENSOGAG00000004693	GAR1	51	99.083	Otolemur_garnettii
ENSPPYG00000014996	GAR1	50	99.083	ENSOARG00000004910	GAR1	52	99.083	Ovis_aries
ENSPPYG00000014996	GAR1	87	99.468	ENSPPAG00000014081	GAR1	94	99.468	Pan_paniscus
ENSPPYG00000014996	GAR1	100	92.727	ENSPPRG00000023697	GAR1	52	99.083	Panthera_pardus
ENSPPYG00000014996	GAR1	100	92.727	ENSPTIG00000021565	GAR1	52	99.083	Panthera_tigris_altaica
ENSPPYG00000014996	GAR1	100	99.078	ENSPTRG00000016364	GAR1	100	99.078	Pan_troglodytes
ENSPPYG00000014996	GAR1	77	66.071	ENSPTRG00000049340	-	66	73.188	Pan_troglodytes
ENSPPYG00000014996	GAR1	100	99.078	ENSPANG00000000639	GAR1	100	99.078	Papio_anubis
ENSPPYG00000014996	GAR1	77	74.251	ENSPKIG00000018991	gar1	65	85.417	Paramormyrops_kingsleyae
ENSPPYG00000014996	GAR1	50	96.330	ENSPEMG00000015838	Gar1	70	98.182	Peromyscus_maniculatus_bairdii
ENSPPYG00000014996	GAR1	78	96.491	ENSRNOG00000061146	Gar1	100	96.491	Rattus_norvegicus
ENSPPYG00000014996	GAR1	52	82.143	ENSRBIG00000042411	-	53	81.651	Rhinopithecus_bieti
ENSPPYG00000014996	GAR1	100	98.618	ENSRBIG00000019547	GAR1	100	98.618	Rhinopithecus_bieti
ENSPPYG00000014996	GAR1	100	99.078	ENSRROG00000028454	GAR1	100	99.078	Rhinopithecus_roxellana
ENSPPYG00000014996	GAR1	52	82.143	ENSRROG00000044348	-	52	81.651	Rhinopithecus_roxellana
ENSPPYG00000014996	GAR1	100	95.909	ENSSBOG00000024785	GAR1	100	95.909	Saimiri_boliviensis_boliviensis
ENSPPYG00000014996	GAR1	77	88.690	ENSSSCG00000009137	GAR1	54	99.083	Sus_scrofa
ENSPPYG00000014996	GAR1	88	92.746	ENSUAMG00000005652	GAR1	96	92.746	Ursus_americanus
ENSPPYG00000014996	GAR1	100	91.818	ENSUMAG00000000776	GAR1	100	91.818	Ursus_maritimus
ENSPPYG00000014996	GAR1	50	99.083	ENSVVUG00000017612	GAR1	56	99.083	Vulpes_vulpes