EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000015533 (Gene tree)
Gene ID: 100171813
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 51835 bases
Position: chr5:71416365-71468199
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000017360	SMN	PF06003.12	2.2e-103	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000018065	-	1625	-	ENSPPYP00000017360	276 (aa)	-	A0A0A0MXR7

Gene Model

Click here to download ENSPPYG00000015533's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000015533's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000015533	-	91	54.582	ENSPPYG00000019189	-	99	55.378

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000015533	-	97	98.885	ENSG00000172062	SMN1	91	98.885	Homo_sapiens
ENSPPYG00000015533	-	97	98.885	ENSG00000205571	SMN2	98	100.000	Homo_sapiens
ENSPPYG00000015533	-	95	50.000	ENSAPOG00000011324	smn1	92	50.923	Acanthochromis_polyacanthus
ENSPPYG00000015533	-	96	86.891	ENSAMEG00000003316	-	88	86.891	Ailuropoda_melanoleuca
ENSPPYG00000015533	-	91	50.385	ENSACIG00000019772	-	94	48.617	Amphilophus_citrinellus
ENSPPYG00000015533	-	95	50.000	ENSAOCG00000024444	smn1	92	50.923	Amphiprion_ocellaris
ENSPPYG00000015533	-	95	50.373	ENSAPEG00000016504	smn1	94	51.292	Amphiprion_percula
ENSPPYG00000015533	-	92	51.894	ENSATEG00000002182	smn1	77	53.030	Anabas_testudineus
ENSPPYG00000015533	-	72	56.500	ENSAPLG00000010912	-	97	55.000	Anas_platyrhynchos
ENSPPYG00000015533	-	97	57.143	ENSACAG00000010017	-	93	56.204	Anolis_carolinensis
ENSPPYG00000015533	-	97	90.037	ENSANAG00000032133	-	92	90.037	Aotus_nancymaae
ENSPPYG00000015533	-	95	52.399	ENSACLG00000007308	smn1	88	51.111	Astatotilapia_calliptera
ENSPPYG00000015533	-	96	83.774	ENSBTAG00000005743	SMN2	92	83.521	Bos_taurus
ENSPPYG00000015533	-	97	91.111	ENSCJAG00000016290	-	92	91.111	Callithrix_jacchus
ENSPPYG00000015533	-	96	87.640	ENSCAFG00000007812	SMN	92	87.640	Canis_familiaris
ENSPPYG00000015533	-	96	87.640	ENSCAFG00020019229	-	85	87.640	Canis_lupus_dingo
ENSPPYG00000015533	-	96	84.328	ENSCHIG00000015559	-	90	83.955	Capra_hircus
ENSPPYG00000015533	-	97	88.764	ENSTSYG00000012058	-	92	88.764	Carlito_syrichta
ENSPPYG00000015533	-	80	66.228	ENSCAPG00000011021	-	100	66.667	Cavia_aperea
ENSPPYG00000015533	-	96	79.121	ENSCPOG00000012328	-	92	78.755	Cavia_porcellus
ENSPPYG00000015533	-	96	79.851	ENSCPOG00000036973	-	91	79.478	Cavia_porcellus
ENSPPYG00000015533	-	97	91.822	ENSCCAG00000018127	-	91	91.822	Cebus_capucinus
ENSPPYG00000015533	-	97	95.167	ENSCATG00000037002	-	91	95.167	Cercocebus_atys
ENSPPYG00000015533	-	96	77.941	ENSCLAG00000000284	-	91	77.941	Chinchilla_lanigera
ENSPPYG00000015533	-	97	95.539	ENSCSAG00000015688	-	91	95.539	Chlorocebus_sabaeus
ENSPPYG00000015533	-	91	73.810	ENSCHOG00000007346	-	100	73.810	Choloepus_hoffmanni
ENSPPYG00000015533	-	96	62.963	ENSCPBG00000010968	-	99	62.222	Chrysemys_picta_bellii
ENSPPYG00000015533	-	92	90.588	ENSCANG00000033324	-	86	88.235	Colobus_angolensis_palliatus
ENSPPYG00000015533	-	97	95.539	ENSCANG00000038242	-	91	95.539	Colobus_angolensis_palliatus
ENSPPYG00000015533	-	97	82.397	ENSCGRG00001017959	-	92	82.397	Cricetulus_griseus_chok1gshd
ENSPPYG00000015533	-	80	72.973	ENSCGRG00001016998	-	87	72.973	Cricetulus_griseus_chok1gshd
ENSPPYG00000015533	-	97	82.397	ENSCGRG00000007698	Smn1	92	82.397	Cricetulus_griseus_crigri
ENSPPYG00000015533	-	94	46.071	ENSCSEG00000015227	smn1	94	48.746	Cynoglossus_semilaevis
ENSPPYG00000015533	-	95	51.128	ENSCVAG00000007498	smn1	92	50.376	Cyprinodon_variegatus
ENSPPYG00000015533	-	96	51.838	ENSDARG00000018494	smn1	93	52.453	Danio_rerio
ENSPPYG00000015533	-	69	70.681	ENSDNOG00000045949	-	80	70.681	Dasypus_novemcinctus
ENSPPYG00000015533	-	87	83.817	ENSDNOG00000007283	-	99	83.817	Dasypus_novemcinctus
ENSPPYG00000015533	-	87	83.817	ENSDORG00000007082	Smn1	89	83.817	Dipodomys_ordii
ENSPPYG00000015533	-	67	68.108	ENSETEG00000001406	-	82	67.647	Echinops_telfairi
ENSPPYG00000015533	-	96	40.636	ENSEBUG00000011902	smn1	94	37.282	Eptatretus_burgeri
ENSPPYG00000015533	-	94	80.000	ENSEASG00005018000	-	89	81.890	Equus_asinus_asinus
ENSPPYG00000015533	-	96	85.768	ENSECAG00000015215	-	92	85.768	Equus_caballus
ENSPPYG00000015533	-	91	80.556	ENSEEUG00000015777	-	100	80.556	Erinaceus_europaeus
ENSPPYG00000015533	-	95	53.114	ENSELUG00000018067	smn1	91	51.661	Esox_lucius
ENSPPYG00000015533	-	96	88.390	ENSFCAG00000028292	SMN	92	88.390	Felis_catus
ENSPPYG00000015533	-	96	58.456	ENSFALG00000012320	-	95	57.509	Ficedula_albicollis
ENSPPYG00000015533	-	96	77.206	ENSFDAG00000017683	-	91	78.309	Fukomys_damarensis
ENSPPYG00000015533	-	62	54.651	ENSFHEG00000018508	smn1	96	49.071	Fundulus_heteroclitus
ENSPPYG00000015533	-	95	50.192	ENSGMOG00000017279	smn1	89	49.425	Gadus_morhua
ENSPPYG00000015533	-	95	57.358	ENSGALG00000002430	SMN	96	55.426	Gallus_gallus
ENSPPYG00000015533	-	95	50.373	ENSGAFG00000009501	smn1	92	49.621	Gambusia_affinis
ENSPPYG00000015533	-	95	52.672	ENSGACG00000010584	smn1	89	49.810	Gasterosteus_aculeatus
ENSPPYG00000015533	-	96	62.132	ENSGAGG00000011374	-	94	61.029	Gopherus_agassizii
ENSPPYG00000015533	-	91	40.708	ENSGAGG00000013639	-	51	50.000	Gopherus_agassizii
ENSPPYG00000015533	-	68	97.326	ENSGGOG00000026704	-	88	97.326	Gorilla_gorilla
ENSPPYG00000015533	-	95	83.270	ENSGGOG00000003872	-	90	86.166	Gorilla_gorilla
ENSPPYG00000015533	-	95	52.874	ENSHBUG00000013987	smn1	91	51.111	Haplochromis_burtoni
ENSPPYG00000015533	-	96	78.676	ENSHGLG00000001018	-	91	78.676	Heterocephalus_glaber_female
ENSPPYG00000015533	-	96	78.652	ENSHGLG00000001905	-	93	78.652	Heterocephalus_glaber_female
ENSPPYG00000015533	-	93	78.210	ENSHGLG00100018676	-	93	78.210	Heterocephalus_glaber_male
ENSPPYG00000015533	-	96	78.676	ENSHGLG00100011252	-	91	78.676	Heterocephalus_glaber_male
ENSPPYG00000015533	-	92	50.000	ENSHCOG00000017136	smn1	84	48.638	Hippocampus_comes
ENSPPYG00000015533	-	95	49.808	ENSIPUG00000012580	smn1	81	48.134	Ictalurus_punctatus
ENSPPYG00000015533	-	92	86.220	ENSSTOG00000012288	-	91	86.220	Ictidomys_tridecemlineatus
ENSPPYG00000015533	-	61	58.580	ENSJJAG00000014853	-	86	62.353	Jaculus_jaculus
ENSPPYG00000015533	-	95	53.091	ENSKMAG00000007239	smn1	96	53.817	Kryptolebias_marmoratus
ENSPPYG00000015533	-	95	50.542	ENSLBEG00000022550	smn1	94	50.951	Labrus_bergylta
ENSPPYG00000015533	-	92	39.033	ENSLACG00000009808	-	86	39.405	Latimeria_chalumnae
ENSPPYG00000015533	-	95	52.091	ENSLOCG00000011339	smn1	91	50.929	Lepisosteus_oculatus
ENSPPYG00000015533	-	96	83.026	ENSLAFG00000003425	-	88	83.026	Loxodonta_africana
ENSPPYG00000015533	-	99	97.091	ENSMFAG00000031523	SMN1	99	97.091	Macaca_fascicularis
ENSPPYG00000015533	-	97	92.193	ENSMFAG00000008812	-	91	92.193	Macaca_fascicularis
ENSPPYG00000015533	-	97	96.283	ENSMMUG00000020214	SMN1	91	96.283	Macaca_mulatta
ENSPPYG00000015533	-	97	91.450	ENSMMUG00000030594	-	91	91.450	Macaca_mulatta
ENSPPYG00000015533	-	97	95.911	ENSMNEG00000035094	-	91	95.911	Macaca_nemestrina
ENSPPYG00000015533	-	81	83.857	ENSMNEG00000036423	-	87	83.857	Macaca_nemestrina
ENSPPYG00000015533	-	97	95.911	ENSMLEG00000041902	-	92	95.911	Mandrillus_leucophaeus
ENSPPYG00000015533	-	95	50.187	ENSMAMG00000011034	smn1	92	50.185	Mastacembelus_armatus
ENSPPYG00000015533	-	95	50.192	ENSMZEG00005013634	smn1	91	51.111	Maylandia_zebra
ENSPPYG00000015533	-	72	55.276	ENSMGAG00000008889	-	95	53.266	Meleagris_gallopavo
ENSPPYG00000015533	-	97	80.899	ENSMAUG00000010262	Smn1	92	81.648	Mesocricetus_auratus
ENSPPYG00000015533	-	97	76.119	ENSMICG00000034708	-	87	87.879	Microcebus_murinus
ENSPPYG00000015533	-	97	80.150	ENSMOCG00000017833	Smn1	92	80.150	Microtus_ochrogaster
ENSPPYG00000015533	-	92	49.802	ENSMMOG00000005504	smn1	90	52.569	Mola_mola
ENSPPYG00000015533	-	96	66.914	ENSMODG00000001436	-	91	68.148	Monodelphis_domestica
ENSPPYG00000015533	-	95	49.438	ENSMALG00000008025	smn1	92	50.185	Monopterus_albus
ENSPPYG00000015533	-	97	81.648	MGP_CAROLIEiJ_G0018836	Smn1	92	81.648	Mus_caroli
ENSPPYG00000015533	-	97	81.648	ENSMUSG00000021645	Smn1	92	81.648	Mus_musculus
ENSPPYG00000015533	-	97	77.528	MGP_PahariEiJ_G0015911	Smn1	92	78.277	Mus_pahari
ENSPPYG00000015533	-	97	80.899	MGP_SPRETEiJ_G0019718	Smn1	92	80.899	Mus_spretus
ENSPPYG00000015533	-	92	87.843	ENSMPUG00000014470	-	90	87.843	Mustela_putorius_furo
ENSPPYG00000015533	-	96	86.447	ENSMLUG00000010603	-	88	86.447	Myotis_lucifugus
ENSPPYG00000015533	-	98	82.288	ENSNGAG00000019833	Smn1	93	82.657	Nannospalax_galili
ENSPPYG00000015533	-	95	52.190	ENSNBRG00000023000	smn1	91	51.481	Neolamprologus_brichardi
ENSPPYG00000015533	-	97	98.141	ENSNLEG00000004454	-	91	98.141	Nomascus_leucogenys
ENSPPYG00000015533	-	82	61.404	ENSMEUG00000011393	-	99	62.882	Notamacropus_eugenii
ENSPPYG00000015533	-	91	81.028	ENSOPRG00000002015	-	100	81.818	Ochotona_princeps
ENSPPYG00000015533	-	92	79.151	ENSODEG00000015976	-	89	79.134	Octodon_degus
ENSPPYG00000015533	-	95	51.825	ENSONIG00000011799	smn1	91	51.111	Oreochromis_niloticus
ENSPPYG00000015533	-	95	63.158	ENSOANG00000001626	-	92	62.406	Ornithorhynchus_anatinus
ENSPPYG00000015533	-	97	78.182	ENSOCUG00000026649	-	92	80.727	Oryctolagus_cuniculus
ENSPPYG00000015533	-	96	83.146	ENSOCUG00000017097	-	90	83.146	Oryctolagus_cuniculus
ENSPPYG00000015533	-	87	84.898	ENSOCUG00000025183	-	90	85.306	Oryctolagus_cuniculus
ENSPPYG00000015533	-	95	51.136	ENSORLG00000010552	smn1	92	51.136	Oryzias_latipes
ENSPPYG00000015533	-	95	50.575	ENSORLG00020007936	smn1	57	58.278	Oryzias_latipes_hni
ENSPPYG00000015533	-	55	58.940	ENSORLG00015022425	smn1	92	51.136	Oryzias_latipes_hsok
ENSPPYG00000015533	-	95	51.103	ENSOMEG00000007824	smn1	92	51.481	Oryzias_melastigma
ENSPPYG00000015533	-	92	78.988	ENSOGAG00000031414	-	89	78.988	Otolemur_garnettii
ENSPPYG00000015533	-	96	83.521	ENSOARG00000005425	-	97	83.521	Ovis_aries
ENSPPYG00000015533	-	97	98.513	ENSPPAG00000036640	-	91	98.513	Pan_paniscus
ENSPPYG00000015533	-	96	88.764	ENSPPRG00000005575	-	92	88.764	Panthera_pardus
ENSPPYG00000015533	-	96	89.139	ENSPTIG00000007745	-	92	89.139	Panthera_tigris_altaica
ENSPPYG00000015533	-	97	97.794	ENSPTRG00000016955	-	92	97.794	Pan_troglodytes
ENSPPYG00000015533	-	97	96.283	ENSPANG00000013601	-	91	96.283	Papio_anubis
ENSPPYG00000015533	-	95	90.875	ENSPANG00000000253	-	89	90.875	Papio_anubis
ENSPPYG00000015533	-	95	49.071	ENSPKIG00000011096	smn1	91	50.958	Paramormyrops_kingsleyae
ENSPPYG00000015533	-	96	60.517	ENSPSIG00000014787	-	86	58.242	Pelodiscus_sinensis
ENSPPYG00000015533	-	95	49.077	ENSPMGG00000012285	smn1	91	48.828	Periophthalmus_magnuspinnatus
ENSPPYG00000015533	-	95	40.876	ENSPMAG00000005004	smn1	90	40.072	Petromyzon_marinus
ENSPPYG00000015533	-	96	66.791	ENSPCIG00000025764	-	92	68.519	Phascolarctos_cinereus
ENSPPYG00000015533	-	95	51.136	ENSPFOG00000007786	smn1	92	50.000	Poecilia_formosa
ENSPPYG00000015533	-	95	51.515	ENSPLAG00000012071	smn1	92	50.379	Poecilia_latipinna
ENSPPYG00000015533	-	95	51.136	ENSPMEG00000017085	smn1	92	50.000	Poecilia_mexicana
ENSPPYG00000015533	-	95	52.273	ENSPREG00000005824	smn1	92	50.758	Poecilia_reticulata
ENSPPYG00000015533	-	96	81.111	ENSPCAG00000004187	-	99	81.481	Procavia_capensis
ENSPPYG00000015533	-	94	70.342	ENSPCOG00000022307	-	99	72.243	Propithecus_coquereli
ENSPPYG00000015533	-	96	88.764	ENSPVAG00000005977	-	91	88.764	Pteropus_vampyrus
ENSPPYG00000015533	-	95	52.190	ENSPNYG00000014148	smn1	91	51.481	Pundamilia_nyererei
ENSPPYG00000015533	-	95	50.570	ENSPNAG00000014007	smn1	80	48.897	Pygocentrus_nattereri
ENSPPYG00000015533	-	97	79.478	ENSRNOG00000018067	Smn1	92	79.478	Rattus_norvegicus
ENSPPYG00000015533	-	92	81.961	ENSRBIG00000036775	-	85	79.608	Rhinopithecus_bieti
ENSPPYG00000015533	-	97	96.283	ENSRBIG00000037052	-	91	96.283	Rhinopithecus_bieti
ENSPPYG00000015533	-	97	96.283	ENSRROG00000039399	-	91	96.283	Rhinopithecus_roxellana
ENSPPYG00000015533	-	97	79.259	ENSRROG00000031088	-	91	77.037	Rhinopithecus_roxellana
ENSPPYG00000015533	-	89	84.190	ENSSBOG00000020112	-	88	84.585	Saimiri_boliviensis_boliviensis
ENSPPYG00000015533	-	97	89.591	ENSSBOG00000011665	-	91	90.335	Saimiri_boliviensis_boliviensis
ENSPPYG00000015533	-	97	67.407	ENSSHAG00000001499	-	97	68.635	Sarcophilus_harrisii
ENSPPYG00000015533	-	95	49.071	ENSSFOG00015015507	smn1	91	49.815	Scleropages_formosus
ENSPPYG00000015533	-	95	48.689	ENSSMAG00000007922	smn1	91	47.510	Scophthalmus_maximus
ENSPPYG00000015533	-	95	50.000	ENSSDUG00000018533	smn1	92	50.735	Seriola_dumerili
ENSPPYG00000015533	-	95	50.362	ENSSLDG00000021135	smn1	92	51.103	Seriola_lalandi_dorsalis
ENSPPYG00000015533	-	95	60.985	ENSSPUG00000000373	-	94	60.440	Sphenodon_punctatus
ENSPPYG00000015533	-	95	50.545	ENSSPAG00000004345	smn1	92	50.923	Stegastes_partitus
ENSPPYG00000015533	-	96	89.513	ENSSSCG00000016970	-	91	89.513	Sus_scrofa
ENSPPYG00000015533	-	77	57.746	ENSSSCG00000033865	-	94	61.033	Sus_scrofa
ENSPPYG00000015533	-	96	64.286	ENSSSCG00000029127	-	88	64.286	Sus_scrofa
ENSPPYG00000015533	-	92	59.144	ENSTGUG00000001548	-	92	59.144	Taeniopygia_guttata
ENSPPYG00000015533	-	51	57.447	ENSTRUG00000000736	smn	92	47.940	Takifugu_rubripes
ENSPPYG00000015533	-	95	47.170	ENSTNIG00000009892	smn1	92	47.348	Tetraodon_nigroviridis
ENSPPYG00000015533	-	61	84.706	ENSTBEG00000002399	-	82	84.706	Tupaia_belangeri
ENSPPYG00000015533	-	96	82.022	ENSTTRG00000005080	-	90	83.521	Tursiops_truncatus
ENSPPYG00000015533	-	61	85.294	ENSUAMG00000024947	-	62	85.294	Ursus_americanus
ENSPPYG00000015533	-	96	87.640	ENSUMAG00000007842	-	68	87.640	Ursus_maritimus
ENSPPYG00000015533	-	92	73.518	ENSVPAG00000009887	-	91	73.123	Vicugna_pacos
ENSPPYG00000015533	-	96	87.640	ENSVVUG00000006934	-	92	87.640	Vulpes_vulpes
ENSPPYG00000015533	-	96	36.131	ENSXETG00000004912	-	76	59.016	Xenopus_tropicalis
ENSPPYG00000015533	-	94	54.511	ENSXETG00000018189	smn2	90	51.282	Xenopus_tropicalis
ENSPPYG00000015533	-	95	51.515	ENSXMAG00000001521	smn1	92	50.000	Xiphophorus_maculatus