EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000015543 (Gene tree)
Gene ID: 100173875
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 39981 bases
Position: chr5:72358109-72398089
Accession: 25734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000017373	MRP-S27	PF10037.9	8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000018078	PTCD2-201	1035	-	ENSPPYP00000017373	344 (aa)	-	H2PFT8

Gene Model

Click here to download ENSPPYG00000015543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000015543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000015543	PTCD2	90	92.754	ENSG00000049883	PTCD2	100	93.596	Homo_sapiens
ENSPPYG00000015543	PTCD2	96	41.067	ENSAPOG00000020682	ptcd2	97	41.067	Acanthochromis_polyacanthus
ENSPPYG00000015543	PTCD2	99	68.831	ENSAMEG00000007194	PTCD2	99	68.831	Ailuropoda_melanoleuca
ENSPPYG00000015543	PTCD2	88	37.389	ENSACIG00000002053	ptcd2	100	37.389	Amphilophus_citrinellus
ENSPPYG00000015543	PTCD2	96	40.267	ENSAOCG00000006616	ptcd2	96	40.267	Amphiprion_ocellaris
ENSPPYG00000015543	PTCD2	93	40.548	ENSAPEG00000022926	ptcd2	93	40.548	Amphiprion_percula
ENSPPYG00000015543	PTCD2	98	48.819	ENSACAG00000009747	PTCD2	97	48.819	Anolis_carolinensis
ENSPPYG00000015543	PTCD2	99	75.969	ENSANAG00000029353	PTCD2	99	75.969	Aotus_nancymaae
ENSPPYG00000015543	PTCD2	88	38.793	ENSACLG00000027742	ptcd2	89	38.793	Astatotilapia_calliptera
ENSPPYG00000015543	PTCD2	83	38.788	ENSAMXG00000029404	ptcd2	88	38.788	Astyanax_mexicanus
ENSPPYG00000015543	PTCD2	99	70.052	ENSBTAG00000014675	PTCD2	100	70.052	Bos_taurus
ENSPPYG00000015543	PTCD2	99	77.003	ENSCJAG00000016364	PTCD2	99	77.003	Callithrix_jacchus
ENSPPYG00000015543	PTCD2	99	69.091	ENSCAFG00000007982	PTCD2	90	69.091	Canis_familiaris
ENSPPYG00000015543	PTCD2	88	69.942	ENSCAFG00020019147	PTCD2	97	69.942	Canis_lupus_dingo
ENSPPYG00000015543	PTCD2	99	71.354	ENSCHIG00000017118	PTCD2	100	71.354	Capra_hircus
ENSPPYG00000015543	PTCD2	99	66.319	ENSCPOG00000040168	PTCD2	100	66.319	Cavia_porcellus
ENSPPYG00000015543	PTCD2	99	76.486	ENSCCAG00000029389	-	99	76.486	Cebus_capucinus
ENSPPYG00000015543	PTCD2	80	67.398	ENSCCAG00000021996	-	98	67.398	Cebus_capucinus
ENSPPYG00000015543	PTCD2	99	77.285	ENSCATG00000019069	PTCD2	100	77.285	Cercocebus_atys
ENSPPYG00000015543	PTCD2	99	65.274	ENSCLAG00000000072	PTCD2	100	65.274	Chinchilla_lanigera
ENSPPYG00000015543	PTCD2	99	78.590	ENSCSAG00000015623	PTCD2	100	78.590	Chlorocebus_sabaeus
ENSPPYG00000015543	PTCD2	69	68.696	ENSCHOG00000010634	PTCD2	82	68.696	Choloepus_hoffmanni
ENSPPYG00000015543	PTCD2	99	47.287	ENSCPBG00000000216	PTCD2	99	47.287	Chrysemys_picta_bellii
ENSPPYG00000015543	PTCD2	99	78.295	ENSCANG00000035636	PTCD2	99	78.295	Colobus_angolensis_palliatus
ENSPPYG00000015543	PTCD2	99	64.508	ENSCGRG00001015289	Ptcd2	84	64.508	Cricetulus_griseus_chok1gshd
ENSPPYG00000015543	PTCD2	99	64.508	ENSCGRG00000006193	Ptcd2	84	64.508	Cricetulus_griseus_crigri
ENSPPYG00000015543	PTCD2	88	40.230	ENSCVAG00000001285	ptcd2	89	40.230	Cyprinodon_variegatus
ENSPPYG00000015543	PTCD2	98	39.529	ENSDARG00000035391	ptcd2	99	39.529	Danio_rerio
ENSPPYG00000015543	PTCD2	99	67.624	ENSDNOG00000008719	PTCD2	100	67.624	Dasypus_novemcinctus
ENSPPYG00000015543	PTCD2	99	67.959	ENSDORG00000004921	Ptcd2	100	67.959	Dipodomys_ordii
ENSPPYG00000015543	PTCD2	99	59.948	ENSETEG00000016542	PTCD2	99	59.948	Echinops_telfairi
ENSPPYG00000015543	PTCD2	99	69.713	ENSEASG00005018038	PTCD2	100	69.713	Equus_asinus_asinus
ENSPPYG00000015543	PTCD2	99	69.531	ENSECAG00000007022	PTCD2	99	69.531	Equus_caballus
ENSPPYG00000015543	PTCD2	99	64.062	ENSEEUG00000014031	PTCD2	99	64.062	Erinaceus_europaeus
ENSPPYG00000015543	PTCD2	89	45.299	ENSELUG00000003584	ptcd2	91	45.299	Esox_lucius
ENSPPYG00000015543	PTCD2	99	72.269	ENSFCAG00000045432	PTCD2	83	72.269	Felis_catus
ENSPPYG00000015543	PTCD2	79	51.103	ENSFALG00000010299	PTCD2	83	51.103	Ficedula_albicollis
ENSPPYG00000015543	PTCD2	99	67.102	ENSFDAG00000018461	PTCD2	100	67.102	Fukomys_damarensis
ENSPPYG00000015543	PTCD2	88	44.444	ENSGMOG00000003637	ptcd2	91	44.444	Gadus_morhua
ENSPPYG00000015543	PTCD2	89	44.000	ENSGALG00000038260	PTCD2	100	42.746	Gallus_gallus
ENSPPYG00000015543	PTCD2	99	50.388	ENSGAGG00000021952	PTCD2	99	50.388	Gopherus_agassizii
ENSPPYG00000015543	PTCD2	99	83.721	ENSGGOG00000010695	PTCD2	99	83.721	Gorilla_gorilla
ENSPPYG00000015543	PTCD2	88	39.080	ENSHBUG00000009191	ptcd2	89	39.080	Haplochromis_burtoni
ENSPPYG00000015543	PTCD2	99	65.535	ENSHGLG00000001234	PTCD2	100	65.535	Heterocephalus_glaber_female
ENSPPYG00000015543	PTCD2	99	65.535	ENSHGLG00100015419	PTCD2	100	65.535	Heterocephalus_glaber_male
ENSPPYG00000015543	PTCD2	97	41.379	ENSHCOG00000001703	ptcd2	95	41.379	Hippocampus_comes
ENSPPYG00000015543	PTCD2	81	38.580	ENSIPUG00000006080	ptcd2	90	38.728	Ictalurus_punctatus
ENSPPYG00000015543	PTCD2	98	70.157	ENSSTOG00000006596	PTCD2	99	70.157	Ictidomys_tridecemlineatus
ENSPPYG00000015543	PTCD2	99	68.407	ENSJJAG00000024388	Ptcd2	100	68.407	Jaculus_jaculus
ENSPPYG00000015543	PTCD2	96	37.433	ENSKMAG00000009329	ptcd2	97	37.433	Kryptolebias_marmoratus
ENSPPYG00000015543	PTCD2	88	39.884	ENSLBEG00000024871	ptcd2	88	39.884	Labrus_bergylta
ENSPPYG00000015543	PTCD2	93	46.703	ENSLOCG00000011122	ptcd2	94	46.703	Lepisosteus_oculatus
ENSPPYG00000015543	PTCD2	78	66.881	ENSLAFG00000004115	PTCD2	100	66.881	Loxodonta_africana
ENSPPYG00000015543	PTCD2	99	77.519	ENSMFAG00000031516	PTCD2	99	77.519	Macaca_fascicularis
ENSPPYG00000015543	PTCD2	99	77.546	ENSMNEG00000007537	PTCD2	100	77.546	Macaca_nemestrina
ENSPPYG00000015543	PTCD2	99	77.519	ENSMLEG00000031093	PTCD2	99	77.519	Mandrillus_leucophaeus
ENSPPYG00000015543	PTCD2	88	41.954	ENSMAMG00000018529	ptcd2	91	41.954	Mastacembelus_armatus
ENSPPYG00000015543	PTCD2	88	38.793	ENSMZEG00005003625	ptcd2	89	38.793	Maylandia_zebra
ENSPPYG00000015543	PTCD2	88	44.253	ENSMGAG00000005033	PTCD2	100	44.253	Meleagris_gallopavo
ENSPPYG00000015543	PTCD2	99	48.042	ENSMAUG00000020253	Ptcd2	100	48.042	Mesocricetus_auratus
ENSPPYG00000015543	PTCD2	100	71.392	ENSMICG00000004535	PTCD2	100	71.392	Microcebus_murinus
ENSPPYG00000015543	PTCD2	99	64.230	ENSMOCG00000019985	Ptcd2	100	64.230	Microtus_ochrogaster
ENSPPYG00000015543	PTCD2	99	50.521	ENSMODG00000001695	PTCD2	100	50.521	Monodelphis_domestica
ENSPPYG00000015543	PTCD2	88	43.966	ENSMALG00000022372	ptcd2	91	43.966	Monopterus_albus
ENSPPYG00000015543	PTCD2	99	63.969	MGP_CAROLIEiJ_G0018829	Ptcd2	100	63.969	Mus_caroli
ENSPPYG00000015543	PTCD2	99	62.663	ENSMUSG00000021650	Ptcd2	100	62.663	Mus_musculus
ENSPPYG00000015543	PTCD2	99	65.535	MGP_PahariEiJ_G0015904	Ptcd2	100	65.535	Mus_pahari
ENSPPYG00000015543	PTCD2	99	63.185	MGP_SPRETEiJ_G0019711	Ptcd2	100	63.185	Mus_spretus
ENSPPYG00000015543	PTCD2	99	69.974	ENSMPUG00000014401	PTCD2	100	69.974	Mustela_putorius_furo
ENSPPYG00000015543	PTCD2	99	69.689	ENSMLUG00000007374	PTCD2	99	69.689	Myotis_lucifugus
ENSPPYG00000015543	PTCD2	99	64.752	ENSNGAG00000005027	Ptcd2	100	64.752	Nannospalax_galili
ENSPPYG00000015543	PTCD2	79	43.015	ENSNBRG00000000092	-	82	43.015	Neolamprologus_brichardi
ENSPPYG00000015543	PTCD2	88	38.793	ENSNBRG00000008174	ptcd2	91	38.793	Neolamprologus_brichardi
ENSPPYG00000015543	PTCD2	99	82.429	ENSNLEG00000004516	PTCD2	99	82.429	Nomascus_leucogenys
ENSPPYG00000015543	PTCD2	83	49.825	ENSMEUG00000014012	-	74	49.825	Notamacropus_eugenii
ENSPPYG00000015543	PTCD2	99	64.249	ENSOPRG00000007290	PTCD2	99	64.249	Ochotona_princeps
ENSPPYG00000015543	PTCD2	99	67.624	ENSODEG00000016417	PTCD2	100	67.624	Octodon_degus
ENSPPYG00000015543	PTCD2	71	39.446	ENSONIG00000011269	ptcd2	85	39.446	Oreochromis_niloticus
ENSPPYG00000015543	PTCD2	93	69.505	ENSOCUG00000007970	PTCD2	100	68.668	Oryctolagus_cuniculus
ENSPPYG00000015543	PTCD2	93	41.209	ENSORLG00000003851	ptcd2	92	41.209	Oryzias_latipes
ENSPPYG00000015543	PTCD2	93	40.659	ENSORLG00020009823	ptcd2	94	40.659	Oryzias_latipes_hni
ENSPPYG00000015543	PTCD2	88	41.935	ENSORLG00015016777	ptcd2	99	41.935	Oryzias_latipes_hsok
ENSPPYG00000015543	PTCD2	92	39.227	ENSOMEG00000012396	ptcd2	87	39.227	Oryzias_melastigma
ENSPPYG00000015543	PTCD2	100	67.784	ENSOGAG00000008390	PTCD2	100	67.784	Otolemur_garnettii
ENSPPYG00000015543	PTCD2	99	70.801	ENSOARG00000005087	PTCD2	99	70.801	Ovis_aries
ENSPPYG00000015543	PTCD2	99	83.463	ENSPPAG00000028480	PTCD2	99	83.463	Pan_paniscus
ENSPPYG00000015543	PTCD2	99	83.204	ENSPTRG00000016968	PTCD2	99	83.204	Pan_troglodytes
ENSPPYG00000015543	PTCD2	88	76.522	ENSPANG00000006611	PTCD2	89	76.522	Papio_anubis
ENSPPYG00000015543	PTCD2	89	42.898	ENSPKIG00000019896	ptcd2	92	42.898	Paramormyrops_kingsleyae
ENSPPYG00000015543	PTCD2	76	52.769	ENSPSIG00000014559	PTCD2	95	52.769	Pelodiscus_sinensis
ENSPPYG00000015543	PTCD2	99	63.896	ENSPEMG00000000884	Ptcd2	100	63.896	Peromyscus_maniculatus_bairdii
ENSPPYG00000015543	PTCD2	99	53.906	ENSPCIG00000029047	PTCD2	100	53.906	Phascolarctos_cinereus
ENSPPYG00000015543	PTCD2	88	38.793	ENSPLAG00000010456	ptcd2	91	38.793	Poecilia_latipinna
ENSPPYG00000015543	PTCD2	88	38.793	ENSPREG00000021797	ptcd2	88	38.793	Poecilia_reticulata
ENSPPYG00000015543	PTCD2	78	66.667	ENSPCAG00000006806	PTCD2	99	66.667	Procavia_capensis
ENSPPYG00000015543	PTCD2	99	66.839	ENSPVAG00000010935	PTCD2	99	66.839	Pteropus_vampyrus
ENSPPYG00000015543	PTCD2	88	38.793	ENSPNYG00000003122	ptcd2	89	38.793	Pundamilia_nyererei
ENSPPYG00000015543	PTCD2	96	41.645	ENSPNAG00000021490	ptcd2	97	41.645	Pygocentrus_nattereri
ENSPPYG00000015543	PTCD2	99	63.185	ENSRNOG00000028403	Ptcd2	100	63.185	Rattus_norvegicus
ENSPPYG00000015543	PTCD2	99	72.610	ENSRBIG00000032929	PTCD2	99	72.610	Rhinopithecus_bieti
ENSPPYG00000015543	PTCD2	99	78.068	ENSRROG00000000080	PTCD2	100	78.068	Rhinopithecus_roxellana
ENSPPYG00000015543	PTCD2	99	75.457	ENSSBOG00000018911	PTCD2	100	75.457	Saimiri_boliviensis_boliviensis
ENSPPYG00000015543	PTCD2	99	52.865	ENSSHAG00000003833	PTCD2	99	52.865	Sarcophilus_harrisii
ENSPPYG00000015543	PTCD2	92	40.443	ENSSFOG00015015415	ptcd2	93	40.443	Scleropages_formosus
ENSPPYG00000015543	PTCD2	88	38.329	ENSSMAG00000010350	ptcd2	90	38.329	Scophthalmus_maximus
ENSPPYG00000015543	PTCD2	93	41.644	ENSSDUG00000008142	ptcd2	90	41.644	Seriola_dumerili
ENSPPYG00000015543	PTCD2	93	41.918	ENSSLDG00000015284	ptcd2	95	41.918	Seriola_lalandi_dorsalis
ENSPPYG00000015543	PTCD2	77	58.065	ENSSARG00000004983	PTCD2	99	58.065	Sorex_araneus
ENSPPYG00000015543	PTCD2	99	45.855	ENSSPUG00000000176	PTCD2	96	45.855	Sphenodon_punctatus
ENSPPYG00000015543	PTCD2	96	38.667	ENSSPAG00000008591	ptcd2	96	38.667	Stegastes_partitus
ENSPPYG00000015543	PTCD2	99	72.191	ENSSSCG00000016975	PTCD2	89	72.191	Sus_scrofa
ENSPPYG00000015543	PTCD2	88	45.217	ENSTGUG00000005705	PTCD2	99	45.217	Taeniopygia_guttata
ENSPPYG00000015543	PTCD2	100	67.784	ENSTBEG00000016559	PTCD2	100	67.784	Tupaia_belangeri
ENSPPYG00000015543	PTCD2	100	70.951	ENSTTRG00000011851	PTCD2	100	70.951	Tursiops_truncatus
ENSPPYG00000015543	PTCD2	99	69.091	ENSUAMG00000007583	PTCD2	90	69.091	Ursus_americanus
ENSPPYG00000015543	PTCD2	99	68.668	ENSUMAG00000007666	PTCD2	100	68.668	Ursus_maritimus
ENSPPYG00000015543	PTCD2	99	69.948	ENSVPAG00000009597	PTCD2	99	69.948	Vicugna_pacos
ENSPPYG00000015543	PTCD2	99	69.191	ENSVVUG00000007299	-	100	69.191	Vulpes_vulpes
ENSPPYG00000015543	PTCD2	89	45.299	ENSXETG00000031652	PTCD2	92	45.299	Xenopus_tropicalis
ENSPPYG00000015543	PTCD2	88	38.793	ENSXMAG00000005940	ptcd2	82	38.793	Xiphophorus_maculatus