EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000016424 (Gene tree)
Gene ID: 100445183
Gene Symbol: VARS2
Alias: DKFZP434L1435|G7a|KIAA1885|VARS2L|VARSL
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 12295 bases
Position: chr6:31645201-31657495
Accession: 100445183
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000018364	tRNA-synt_1g	PF09334.11	9.6e-15	1	1
ENSPPYP00000018364	Anticodon_1	PF08264.13	6.8e-31	1	1
ENSPPYP00000018364	tRNA-synt_1	PF00133.22	1.6e-182	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000019098	VARS2-201	4070	-	ENSPPYP00000018364	1063 (aa)	XP_002816692	H2PIG7

Gene Model

Click here to download ENSPPYG00000016424's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000016424's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000016424	VARS2	91	50.000	ENSPPYG00000016460	VARS	81	48.790

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000016424	VARS2	92	51.626	ENSAPOG00000007396	vars2	97	50.568	Acanthochromis_polyacanthus
ENSPPYG00000016424	VARS2	99	86.698	ENSAMEG00000012997	VARS2	97	86.698	Ailuropoda_melanoleuca
ENSPPYG00000016424	VARS2	97	50.473	ENSACIG00000004344	vars2	99	50.379	Amphilophus_citrinellus
ENSPPYG00000016424	VARS2	92	50.888	ENSAOCG00000000476	vars2	97	49.716	Amphiprion_ocellaris
ENSPPYG00000016424	VARS2	92	50.986	ENSAPEG00000008646	vars2	95	49.811	Amphiprion_percula
ENSPPYG00000016424	VARS2	91	53.568	ENSATEG00000012291	vars2	96	52.262	Anabas_testudineus
ENSPPYG00000016424	VARS2	97	58.492	ENSACAG00000022093	VARS2	97	58.302	Anolis_carolinensis
ENSPPYG00000016424	VARS2	100	94.073	ENSANAG00000038018	VARS2	100	94.073	Aotus_nancymaae
ENSPPYG00000016424	VARS2	97	50.094	ENSACLG00000018673	vars2	99	50.000	Astatotilapia_calliptera
ENSPPYG00000016424	VARS2	95	52.450	ENSAMXG00000017773	vars2	93	54.922	Astyanax_mexicanus
ENSPPYG00000016424	VARS2	99	89.573	ENSBTAG00000010698	VARS2	99	89.350	Bos_taurus
ENSPPYG00000016424	VARS2	100	94.262	ENSCJAG00000019826	VARS2	100	94.262	Callithrix_jacchus
ENSPPYG00000016424	VARS2	99	85.539	ENSCAFG00000000454	VARS2	99	85.539	Canis_familiaris
ENSPPYG00000016424	VARS2	87	86.069	ENSCAFG00020019387	VARS2	95	86.114	Canis_lupus_dingo
ENSPPYG00000016424	VARS2	99	89.374	ENSCHIG00000007847	VARS2	99	89.057	Capra_hircus
ENSPPYG00000016424	VARS2	100	89.380	ENSTSYG00000009904	VARS2	100	89.380	Carlito_syrichta
ENSPPYG00000016424	VARS2	88	84.657	ENSCAPG00000017770	VARS2	99	84.657	Cavia_aperea
ENSPPYG00000016424	VARS2	99	84.008	ENSCPOG00000021834	VARS2	99	84.008	Cavia_porcellus
ENSPPYG00000016424	VARS2	100	94.638	ENSCCAG00000037907	VARS2	100	94.638	Cebus_capucinus
ENSPPYG00000016424	VARS2	100	97.836	ENSCATG00000032554	VARS2	100	97.836	Cercocebus_atys
ENSPPYG00000016424	VARS2	99	84.920	ENSCLAG00000002889	VARS2	99	84.920	Chinchilla_lanigera
ENSPPYG00000016424	VARS2	100	97.272	ENSCSAG00000008327	VARS2	100	97.272	Chlorocebus_sabaeus
ENSPPYG00000016424	VARS2	90	62.642	ENSCPBG00000021502	VARS2	96	62.642	Chrysemys_picta_bellii
ENSPPYG00000016424	VARS2	100	97.648	ENSCANG00000014991	VARS2	99	97.648	Colobus_angolensis_palliatus
ENSPPYG00000016424	VARS2	98	83.349	ENSCGRG00001021535	Vars2	99	83.176	Cricetulus_griseus_chok1gshd
ENSPPYG00000016424	VARS2	98	83.349	ENSCGRG00000014112	Vars2	99	83.176	Cricetulus_griseus_crigri
ENSPPYG00000016424	VARS2	85	56.738	ENSCSEG00000015432	vars2	93	56.738	Cynoglossus_semilaevis
ENSPPYG00000016424	VARS2	64	52.051	ENSCVAG00000017765	vars2	98	51.909	Cyprinodon_variegatus
ENSPPYG00000016424	VARS2	96	51.524	ENSDARG00000056717	vars2	97	51.530	Danio_rerio
ENSPPYG00000016424	VARS2	78	87.201	ENSDORG00000008516	Vars2	93	87.201	Dipodomys_ordii
ENSPPYG00000016424	VARS2	99	76.604	ENSETEG00000014844	VARS2	99	76.604	Echinops_telfairi
ENSPPYG00000016424	VARS2	99	89.632	ENSEASG00005019997	VARS2	97	89.632	Equus_asinus_asinus
ENSPPYG00000016424	VARS2	99	90.866	ENSECAG00000018202	VARS2	100	90.866	Equus_caballus
ENSPPYG00000016424	VARS2	68	87.379	ENSEEUG00000012591	-	68	87.379	Erinaceus_europaeus
ENSPPYG00000016424	VARS2	93	51.647	ENSELUG00000017824	vars2	98	50.604	Esox_lucius
ENSPPYG00000016424	VARS2	99	87.240	ENSFCAG00000010531	VARS2	99	87.240	Felis_catus
ENSPPYG00000016424	VARS2	99	85.283	ENSFDAG00000017216	VARS2	99	85.283	Fukomys_damarensis
ENSPPYG00000016424	VARS2	84	51.955	ENSFHEG00000013932	vars2	91	50.647	Fundulus_heteroclitus
ENSPPYG00000016424	VARS2	89	55.450	ENSGMOG00000018960	vars2	97	55.344	Gadus_morhua
ENSPPYG00000016424	VARS2	85	48.510	ENSGAFG00000004737	vars2	92	48.391	Gambusia_affinis
ENSPPYG00000016424	VARS2	92	53.448	ENSGACG00000001464	vars2	99	53.245	Gasterosteus_aculeatus
ENSPPYG00000016424	VARS2	90	61.856	ENSGAGG00000011652	VARS2	98	61.856	Gopherus_agassizii
ENSPPYG00000016424	VARS2	100	98.213	ENSGGOG00000014587	VARS2	100	98.213	Gorilla_gorilla
ENSPPYG00000016424	VARS2	91	51.308	ENSHBUG00000002448	vars2	94	51.207	Haplochromis_burtoni
ENSPPYG00000016424	VARS2	99	83.883	ENSHGLG00000012886	VARS2	96	83.883	Heterocephalus_glaber_female
ENSPPYG00000016424	VARS2	99	83.789	ENSHGLG00100016535	VARS2	99	83.789	Heterocephalus_glaber_male
ENSPPYG00000016424	VARS2	69	49.134	ENSHCOG00000017907	vars2	94	52.039	Hippocampus_comes
ENSPPYG00000016424	VARS2	89	55.047	ENSIPUG00000015573	Vars2	93	53.550	Ictalurus_punctatus
ENSPPYG00000016424	VARS2	100	88.910	ENSSTOG00000009924	VARS2	100	88.910	Ictidomys_tridecemlineatus
ENSPPYG00000016424	VARS2	99	83.035	ENSJJAG00000011144	Vars2	100	83.035	Jaculus_jaculus
ENSPPYG00000016424	VARS2	93	51.224	ENSKMAG00000001393	vars2	96	50.523	Kryptolebias_marmoratus
ENSPPYG00000016424	VARS2	94	51.210	ENSLBEG00000011949	vars2	96	50.669	Labrus_bergylta
ENSPPYG00000016424	VARS2	52	62.342	ENSLBEG00000005480	-	81	62.319	Labrus_bergylta
ENSPPYG00000016424	VARS2	95	51.981	ENSLACG00000001576	-	99	52.229	Latimeria_chalumnae
ENSPPYG00000016424	VARS2	99	87.393	ENSLAFG00000015183	VARS2	99	87.393	Loxodonta_africana
ENSPPYG00000016424	VARS2	100	96.896	ENSMFAG00000042367	VARS2	100	96.896	Macaca_fascicularis
ENSPPYG00000016424	VARS2	100	96.896	ENSMMUG00000018609	VARS2	100	96.896	Macaca_mulatta
ENSPPYG00000016424	VARS2	100	97.084	ENSMNEG00000043163	VARS2	100	97.084	Macaca_nemestrina
ENSPPYG00000016424	VARS2	100	97.836	ENSMLEG00000041728	VARS2	97	97.836	Mandrillus_leucophaeus
ENSPPYG00000016424	VARS2	96	50.431	ENSMAMG00000020339	vars2	97	50.095	Mastacembelus_armatus
ENSPPYG00000016424	VARS2	97	50.000	ENSMZEG00005017669	vars2	99	49.906	Maylandia_zebra
ENSPPYG00000016424	VARS2	99	83.853	ENSMAUG00000018946	Vars2	99	83.853	Mesocricetus_auratus
ENSPPYG00000016424	VARS2	84	91.256	ENSMICG00000005365	VARS2	100	91.256	Microcebus_murinus
ENSPPYG00000016424	VARS2	93	85.576	ENSMOCG00000014607	Vars2	99	85.576	Microtus_ochrogaster
ENSPPYG00000016424	VARS2	91	51.721	ENSMMOG00000012122	vars2	96	50.048	Mola_mola
ENSPPYG00000016424	VARS2	99	75.024	ENSMODG00000015848	VARS2	99	75.024	Monodelphis_domestica
ENSPPYG00000016424	VARS2	93	52.092	ENSMALG00000009217	vars2	98	51.992	Monopterus_albus
ENSPPYG00000016424	VARS2	99	84.042	MGP_CAROLIEiJ_G0021529	Vars2	99	84.042	Mus_caroli
ENSPPYG00000016424	VARS2	99	83.758	ENSMUSG00000038838	Vars2	99	83.758	Mus_musculus
ENSPPYG00000016424	VARS2	99	84.230	MGP_PahariEiJ_G0020523	Vars2	99	84.230	Mus_pahari
ENSPPYG00000016424	VARS2	99	83.853	MGP_SPRETEiJ_G0022436	Vars2	99	83.853	Mus_spretus
ENSPPYG00000016424	VARS2	99	87.075	ENSMPUG00000011643	VARS2	99	87.075	Mustela_putorius_furo
ENSPPYG00000016424	VARS2	99	84.142	ENSMLUG00000002356	VARS2	97	84.142	Myotis_lucifugus
ENSPPYG00000016424	VARS2	98	77.852	ENSNGAG00000020607	Vars2	99	77.474	Nannospalax_galili
ENSPPYG00000016424	VARS2	61	49.311	ENSNBRG00000001624	vars2	57	50.552	Neolamprologus_brichardi
ENSPPYG00000016424	VARS2	100	94.549	ENSNLEG00000005625	VARS2	97	94.549	Nomascus_leucogenys
ENSPPYG00000016424	VARS2	78	73.000	ENSMEUG00000014475	VARS2	90	73.000	Notamacropus_eugenii
ENSPPYG00000016424	VARS2	90	84.071	ENSOPRG00000000682	VARS2	90	84.071	Ochotona_princeps
ENSPPYG00000016424	VARS2	99	83.569	ENSODEG00000017965	VARS2	99	83.569	Octodon_degus
ENSPPYG00000016424	VARS2	93	37.524	ENSONIG00000004734	vars2	98	37.524	Oreochromis_niloticus
ENSPPYG00000016424	VARS2	81	61.316	ENSOANG00000000398	-	99	61.085	Ornithorhynchus_anatinus
ENSPPYG00000016424	VARS2	99	81.267	ENSOCUG00000021496	VARS2	64	81.361	Oryctolagus_cuniculus
ENSPPYG00000016424	VARS2	93	51.852	ENSORLG00000010632	vars2	96	51.189	Oryzias_latipes
ENSPPYG00000016424	VARS2	92	52.273	ENSORLG00020018584	vars2	96	51.292	Oryzias_latipes_hni
ENSPPYG00000016424	VARS2	92	52.174	ENSORLG00015010408	vars2	96	50.951	Oryzias_latipes_hsok
ENSPPYG00000016424	VARS2	92	52.626	ENSOMEG00000008360	vars2	96	51.192	Oryzias_melastigma
ENSPPYG00000016424	VARS2	100	89.869	ENSOGAG00000006087	VARS2	97	89.869	Otolemur_garnettii
ENSPPYG00000016424	VARS2	99	88.152	ENSOARG00000010844	VARS2	98	87.842	Ovis_aries
ENSPPYG00000016424	VARS2	100	98.401	ENSPPAG00000041141	VARS2	100	98.401	Pan_paniscus
ENSPPYG00000016424	VARS2	99	87.121	ENSPPRG00000006751	VARS2	97	87.121	Panthera_pardus
ENSPPYG00000016424	VARS2	99	87.027	ENSPTIG00000017799	VARS2	98	88.396	Panthera_tigris_altaica
ENSPPYG00000016424	VARS2	100	98.401	ENSPTRG00000034497	VARS2	100	98.401	Pan_troglodytes
ENSPPYG00000016424	VARS2	100	97.460	ENSPANG00000018481	VARS2	100	97.481	Papio_anubis
ENSPPYG00000016424	VARS2	95	54.305	ENSPKIG00000011372	vars2	98	53.484	Paramormyrops_kingsleyae
ENSPPYG00000016424	VARS2	59	65.927	ENSPSIG00000006206	VARS2	92	65.432	Pelodiscus_sinensis
ENSPPYG00000016424	VARS2	98	51.866	ENSPMGG00000000465	vars2	99	50.935	Periophthalmus_magnuspinnatus
ENSPPYG00000016424	VARS2	99	84.455	ENSPEMG00000014691	Vars2	99	84.455	Peromyscus_maniculatus_bairdii
ENSPPYG00000016424	VARS2	99	76.916	ENSPCIG00000015040	VARS2	99	76.916	Phascolarctos_cinereus
ENSPPYG00000016424	VARS2	92	52.789	ENSPFOG00000017616	vars2	95	51.751	Poecilia_formosa
ENSPPYG00000016424	VARS2	92	52.334	ENSPLAG00000019778	vars2	96	51.309	Poecilia_latipinna
ENSPPYG00000016424	VARS2	92	52.433	ENSPMEG00000011123	vars2	95	51.406	Poecilia_mexicana
ENSPPYG00000016424	VARS2	89	47.848	ENSPREG00000014998	vars2	95	46.535	Poecilia_reticulata
ENSPPYG00000016424	VARS2	84	81.977	ENSPCAG00000006946	VARS2	84	81.977	Procavia_capensis
ENSPPYG00000016424	VARS2	99	89.736	ENSPCOG00000014839	VARS2	97	89.736	Propithecus_coquereli
ENSPPYG00000016424	VARS2	100	87.688	ENSPVAG00000004197	VARS2	99	87.688	Pteropus_vampyrus
ENSPPYG00000016424	VARS2	83	58.333	ENSPNYG00000010314	vars2	98	58.333	Pundamilia_nyererei
ENSPPYG00000016424	VARS2	94	53.043	ENSPNAG00000026793	vars2	96	52.857	Pygocentrus_nattereri
ENSPPYG00000016424	VARS2	99	83.917	ENSRNOG00000000833	Vars2	99	83.917	Rattus_norvegicus
ENSPPYG00000016424	VARS2	100	97.366	ENSRBIG00000032725	VARS2	100	97.366	Rhinopithecus_bieti
ENSPPYG00000016424	VARS2	100	97.460	ENSRROG00000043847	VARS2	100	97.460	Rhinopithecus_roxellana
ENSPPYG00000016424	VARS2	100	91.797	ENSSBOG00000033240	VARS2	98	92.166	Saimiri_boliviensis_boliviensis
ENSPPYG00000016424	VARS2	99	75.497	ENSSHAG00000009307	VARS2	100	75.497	Sarcophilus_harrisii
ENSPPYG00000016424	VARS2	98	51.772	ENSSFOG00015016187	vars2	98	51.493	Scleropages_formosus
ENSPPYG00000016424	VARS2	93	52.813	ENSSMAG00000020842	vars2	97	52.203	Scophthalmus_maximus
ENSPPYG00000016424	VARS2	93	52.165	ENSSDUG00000011598	vars2	97	51.143	Seriola_dumerili
ENSPPYG00000016424	VARS2	91	52.599	ENSSLDG00000015492	vars2	96	50.525	Seriola_lalandi_dorsalis
ENSPPYG00000016424	VARS2	57	90.511	ENSSARG00000003786	-	70	90.511	Sorex_araneus
ENSPPYG00000016424	VARS2	88	59.315	ENSSPUG00000014700	VARS2	94	59.208	Sphenodon_punctatus
ENSPPYG00000016424	VARS2	93	49.901	ENSSPAG00000004654	vars2	97	48.755	Stegastes_partitus
ENSPPYG00000016424	VARS2	99	88.962	ENSSSCG00000001384	VARS2	99	89.495	Sus_scrofa
ENSPPYG00000016424	VARS2	92	53.280	ENSTRUG00000005264	vars2	95	53.116	Takifugu_rubripes
ENSPPYG00000016424	VARS2	100	50.230	ENSTNIG00000005916	vars2	100	50.735	Tetraodon_nigroviridis
ENSPPYG00000016424	VARS2	52	91.045	ENSTBEG00000007976	-	53	91.045	Tupaia_belangeri
ENSPPYG00000016424	VARS2	94	89.686	ENSTTRG00000012243	VARS2	100	76.410	Tursiops_truncatus
ENSPPYG00000016424	VARS2	99	86.711	ENSUAMG00000026124	VARS2	99	88.152	Ursus_americanus
ENSPPYG00000016424	VARS2	99	87.736	ENSUMAG00000019894	VARS2	99	87.736	Ursus_maritimus
ENSPPYG00000016424	VARS2	99	85.917	ENSVVUG00000010754	VARS2	94	85.917	Vulpes_vulpes
ENSPPYG00000016424	VARS2	89	54.611	ENSXETG00000003036	vars2	100	54.611	Xenopus_tropicalis
ENSPPYG00000016424	VARS2	88	54.478	ENSXCOG00000003455	vars2	94	53.001	Xiphophorus_couchianus
ENSPPYG00000016424	VARS2	93	51.320	ENSXMAG00000013523	vars2	96	50.719	Xiphophorus_maculatus