EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000016460 (Gene tree)
Gene ID: -
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 18529 bases
Position: chr6:32277370-32295898
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000018404	tRNA-synt_1g	PF09334.11	1.1e-10	1	1
ENSPPYP00000018404	Anticodon_1	PF08264.13	5.2e-18	1	1
ENSPPYP00000018404	tRNA-synt_1	PF00133.22	5.6e-202	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000019139	VARS-201	4309	-	ENSPPYP00000018404	1246 (aa)	-	H2PIK4

Gene Model

Click here to download ENSPPYG00000016460's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000016460's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000016460	VARS	81	48.790	ENSPPYG00000016424	VARS2	91	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000016460	VARS	100	97.706	ENSG00000204394	VARS	100	99.425	Homo_sapiens
ENSPPYG00000016460	VARS	98	63.417	ENSAPOG00000020691	vars	99	63.094	Acanthochromis_polyacanthus
ENSPPYG00000016460	VARS	98	63.417	ENSAPOG00000020921	vars	99	63.094	Acanthochromis_polyacanthus
ENSPPYG00000016460	VARS	100	93.360	ENSAMEG00000006417	VARS	100	93.360	Ailuropoda_melanoleuca
ENSPPYG00000016460	VARS	100	63.900	ENSACIG00000013752	vars	100	64.072	Amphilophus_citrinellus
ENSPPYG00000016460	VARS	100	63.072	ENSAOCG00000002447	vars	100	62.628	Amphiprion_ocellaris
ENSPPYG00000016460	VARS	100	63.072	ENSAPEG00000010638	vars	99	63.240	Amphiprion_percula
ENSPPYG00000016460	VARS	100	63.220	ENSATEG00000020219	vars	100	63.112	Anabas_testudineus
ENSPPYG00000016460	VARS	90	68.777	ENSACAG00000029133	-	99	69.211	Anolis_carolinensis
ENSPPYG00000016460	VARS	100	96.044	ENSANAG00000015453	VARS	100	96.044	Aotus_nancymaae
ENSPPYG00000016460	VARS	100	63.158	ENSACLG00000025699	vars	97	63.326	Astatotilapia_calliptera
ENSPPYG00000016460	VARS	94	64.137	ENSAMXG00000017716	vars	95	64.137	Astyanax_mexicanus
ENSPPYG00000016460	VARS	100	93.196	ENSBTAG00000005631	VARS	100	93.196	Bos_taurus
ENSPPYG00000016460	VARS	100	96.123	ENSCJAG00000002604	VARS	100	96.123	Callithrix_jacchus
ENSPPYG00000016460	VARS	100	92.722	ENSCAFG00000000636	VARS	100	92.722	Canis_familiaris
ENSPPYG00000016460	VARS	94	92.483	ENSCAFG00020020790	VARS	96	92.483	Canis_lupus_dingo
ENSPPYG00000016460	VARS	100	93.434	ENSCHIG00000011008	VARS	100	93.434	Capra_hircus
ENSPPYG00000016460	VARS	100	94.541	ENSTSYG00000001567	VARS	100	94.541	Carlito_syrichta
ENSPPYG00000016460	VARS	91	88.668	ENSCAPG00000013736	VARS	99	88.668	Cavia_aperea
ENSPPYG00000016460	VARS	100	90.032	ENSCPOG00000000870	VARS	100	90.032	Cavia_porcellus
ENSPPYG00000016460	VARS	100	96.282	ENSCCAG00000035656	VARS	100	96.282	Cebus_capucinus
ENSPPYG00000016460	VARS	100	96.915	ENSCATG00000022394	VARS	100	96.915	Cercocebus_atys
ENSPPYG00000016460	VARS	88	87.577	ENSCLAG00000009470	VARS	92	87.577	Chinchilla_lanigera
ENSPPYG00000016460	VARS	100	97.389	ENSCSAG00000008784	VARS	100	97.389	Chlorocebus_sabaeus
ENSPPYG00000016460	VARS	77	72.279	ENSCPBG00000007943	VARS	96	72.382	Chrysemys_picta_bellii
ENSPPYG00000016460	VARS	100	97.073	ENSCANG00000033570	VARS	100	97.073	Colobus_angolensis_palliatus
ENSPPYG00000016460	VARS	100	91.456	ENSCGRG00001005686	Vars	100	91.456	Cricetulus_griseus_chok1gshd
ENSPPYG00000016460	VARS	92	86.181	ENSCGRG00000013352	Vars	78	86.181	Cricetulus_griseus_crigri
ENSPPYG00000016460	VARS	100	63.355	ENSCSEG00000019652	vars	100	63.196	Cynoglossus_semilaevis
ENSPPYG00000016460	VARS	100	63.792	ENSCVAG00000022398	vars	100	63.792	Cyprinodon_variegatus
ENSPPYG00000016460	VARS	100	63.333	ENSDARG00000044575	vars	100	63.481	Danio_rerio
ENSPPYG00000016460	VARS	84	91.063	ENSDORG00000016433	Vars	95	91.063	Dipodomys_ordii
ENSPPYG00000016460	VARS	70	86.438	ENSETEG00000003824	VARS	76	86.438	Echinops_telfairi
ENSPPYG00000016460	VARS	50	67.391	ENSEBUG00000007086	vars	84	66.667	Eptatretus_burgeri
ENSPPYG00000016460	VARS	57	59.478	ENSEBUG00000004637	vars	100	59.753	Eptatretus_burgeri
ENSPPYG00000016460	VARS	100	94.225	ENSEASG00005015673	VARS	100	94.225	Equus_asinus_asinus
ENSPPYG00000016460	VARS	100	93.202	ENSECAG00000014620	VARS	100	93.676	Equus_caballus
ENSPPYG00000016460	VARS	83	87.970	ENSEEUG00000004116	VARS	83	87.970	Erinaceus_europaeus
ENSPPYG00000016460	VARS	100	62.837	ENSELUG00000006550	vars	97	62.837	Esox_lucius
ENSPPYG00000016460	VARS	100	93.354	ENSFCAG00000004510	VARS	100	93.354	Felis_catus
ENSPPYG00000016460	VARS	81	89.588	ENSFDAG00000011401	VARS	100	89.588	Fukomys_damarensis
ENSPPYG00000016460	VARS	100	63.968	ENSFHEG00000010672	vars	100	63.947	Fundulus_heteroclitus
ENSPPYG00000016460	VARS	92	64.393	ENSGMOG00000014908	vars	97	63.749	Gadus_morhua
ENSPPYG00000016460	VARS	100	64.125	ENSGAFG00000021630	vars	100	63.764	Gambusia_affinis
ENSPPYG00000016460	VARS	92	64.662	ENSGACG00000009601	vars	98	64.500	Gasterosteus_aculeatus
ENSPPYG00000016460	VARS	50	64.826	ENSGAGG00000006508	-	91	64.196	Gopherus_agassizii
ENSPPYG00000016460	VARS	100	97.785	ENSGGOG00000011364	VARS	100	97.785	Gorilla_gorilla
ENSPPYG00000016460	VARS	100	63.080	ENSHBUG00000017151	vars	97	63.248	Haplochromis_burtoni
ENSPPYG00000016460	VARS	100	89.082	ENSHGLG00000011646	VARS	100	88.766	Heterocephalus_glaber_female
ENSPPYG00000016460	VARS	93	81.312	ENSHGLG00100018062	VARS	100	81.229	Heterocephalus_glaber_male
ENSPPYG00000016460	VARS	99	62.791	ENSHCOG00000012198	vars	99	62.957	Hippocampus_comes
ENSPPYG00000016460	VARS	100	63.813	ENSIPUG00000005218	vars	100	63.813	Ictalurus_punctatus
ENSPPYG00000016460	VARS	100	93.123	ENSSTOG00000013112	VARS	100	93.123	Ictidomys_tridecemlineatus
ENSPPYG00000016460	VARS	100	89.636	ENSJJAG00000019749	-	100	89.636	Jaculus_jaculus
ENSPPYG00000016460	VARS	100	70.411	ENSJJAG00000015343	-	99	71.888	Jaculus_jaculus
ENSPPYG00000016460	VARS	100	63.665	ENSKMAG00000009455	vars	100	63.428	Kryptolebias_marmoratus
ENSPPYG00000016460	VARS	100	63.312	ENSLBEG00000010341	vars	100	63.154	Labrus_bergylta
ENSPPYG00000016460	VARS	94	60.970	ENSLACG00000015232	VARS	99	61.557	Latimeria_chalumnae
ENSPPYG00000016460	VARS	100	65.156	ENSLOCG00000004240	vars	100	65.391	Lepisosteus_oculatus
ENSPPYG00000016460	VARS	100	92.642	ENSLAFG00000023090	VARS	100	92.642	Loxodonta_africana
ENSPPYG00000016460	VARS	100	97.310	ENSMFAG00000001032	VARS	100	97.310	Macaca_fascicularis
ENSPPYG00000016460	VARS	100	97.310	ENSMMUG00000006828	VARS	100	97.310	Macaca_mulatta
ENSPPYG00000016460	VARS	100	97.310	ENSMNEG00000042072	VARS	100	97.310	Macaca_nemestrina
ENSPPYG00000016460	VARS	100	97.073	ENSMLEG00000039307	VARS	100	97.073	Mandrillus_leucophaeus
ENSPPYG00000016460	VARS	100	63.283	ENSMAMG00000003949	vars	100	63.339	Mastacembelus_armatus
ENSPPYG00000016460	VARS	100	63.158	ENSMZEG00005018327	vars	100	63.154	Maylandia_zebra
ENSPPYG00000016460	VARS	100	90.981	ENSMAUG00000006715	Vars	100	90.981	Mesocricetus_auratus
ENSPPYG00000016460	VARS	100	93.434	ENSMICG00000003548	VARS	100	93.434	Microcebus_murinus
ENSPPYG00000016460	VARS	100	88.291	ENSMOCG00000015404	Vars	100	88.845	Microtus_ochrogaster
ENSPPYG00000016460	VARS	100	62.716	ENSMMOG00000015801	vars	100	62.716	Mola_mola
ENSPPYG00000016460	VARS	100	85.285	ENSMODG00000015204	-	100	85.285	Monodelphis_domestica
ENSPPYG00000016460	VARS	99	63.500	ENSMALG00000022532	vars	99	63.262	Monopterus_albus
ENSPPYG00000016460	VARS	100	91.851	MGP_CAROLIEiJ_G0021491	Vars	100	91.851	Mus_caroli
ENSPPYG00000016460	VARS	100	91.851	ENSMUSG00000007029	Vars	100	91.851	Mus_musculus
ENSPPYG00000016460	VARS	100	91.297	MGP_PahariEiJ_G0020486	Vars	100	91.297	Mus_pahari
ENSPPYG00000016460	VARS	100	91.930	MGP_SPRETEiJ_G0022396	Vars	100	91.930	Mus_spretus
ENSPPYG00000016460	VARS	100	93.196	ENSMPUG00000010821	VARS	100	93.196	Mustela_putorius_furo
ENSPPYG00000016460	VARS	79	92.915	ENSMLUG00000013126	VARS	100	93.522	Myotis_lucifugus
ENSPPYG00000016460	VARS	100	90.744	ENSNGAG00000012151	Vars	100	90.744	Nannospalax_galili
ENSPPYG00000016460	VARS	100	62.893	ENSNBRG00000020520	vars	100	63.015	Neolamprologus_brichardi
ENSPPYG00000016460	VARS	100	96.915	ENSNLEG00000006351	VARS	100	96.915	Nomascus_leucogenys
ENSPPYG00000016460	VARS	100	81.408	ENSMEUG00000011378	VARS	100	81.408	Notamacropus_eugenii
ENSPPYG00000016460	VARS	100	92.247	ENSOPRG00000003607	VARS	100	92.247	Ochotona_princeps
ENSPPYG00000016460	VARS	100	89.715	ENSODEG00000017681	VARS	100	89.715	Octodon_degus
ENSPPYG00000016460	VARS	100	63.544	ENSONIG00000013064	vars	99	66.435	Oreochromis_niloticus
ENSPPYG00000016460	VARS	77	78.622	ENSOANG00000005400	VARS	98	78.147	Ornithorhynchus_anatinus
ENSPPYG00000016460	VARS	100	90.379	ENSOCUG00000022463	VARS	100	90.142	Oryctolagus_cuniculus
ENSPPYG00000016460	VARS	100	62.997	ENSORLG00000013063	vars	100	62.807	Oryzias_latipes
ENSPPYG00000016460	VARS	100	63.685	ENSORLG00020003504	vars	100	63.328	Oryzias_latipes_hni
ENSPPYG00000016460	VARS	100	63.580	ENSORLG00015009001	vars	100	63.223	Oryzias_latipes_hsok
ENSPPYG00000016460	VARS	100	63.426	ENSOMEG00000015016	vars	100	63.069	Oryzias_melastigma
ENSPPYG00000016460	VARS	100	93.513	ENSOGAG00000007515	VARS	100	93.513	Otolemur_garnettii
ENSPPYG00000016460	VARS	100	97.943	ENSPPAG00000034012	VARS	100	97.943	Pan_paniscus
ENSPPYG00000016460	VARS	100	93.434	ENSPPRG00000014855	VARS	100	93.434	Panthera_pardus
ENSPPYG00000016460	VARS	85	93.030	ENSPTIG00000010462	VARS	95	93.040	Panthera_tigris_altaica
ENSPPYG00000016460	VARS	100	97.864	ENSPTRG00000017985	VARS	100	97.864	Pan_troglodytes
ENSPPYG00000016460	VARS	100	95.662	ENSPANG00000014565	VARS	100	95.662	Papio_anubis
ENSPPYG00000016460	VARS	100	62.394	ENSPKIG00000016304	vars	100	62.548	Paramormyrops_kingsleyae
ENSPPYG00000016460	VARS	100	64.066	ENSPMGG00000023909	vars	100	63.909	Periophthalmus_magnuspinnatus
ENSPPYG00000016460	VARS	100	92.009	ENSPEMG00000006639	Vars	100	92.009	Peromyscus_maniculatus_bairdii
ENSPPYG00000016460	VARS	100	84.573	ENSPCIG00000018553	VARS	100	84.573	Phascolarctos_cinereus
ENSPPYG00000016460	VARS	100	64.280	ENSPFOG00000015690	vars	100	63.919	Poecilia_formosa
ENSPPYG00000016460	VARS	100	64.673	ENSPLAG00000009590	vars	100	64.673	Poecilia_latipinna
ENSPPYG00000016460	VARS	100	64.280	ENSPMEG00000004708	vars	100	63.919	Poecilia_mexicana
ENSPPYG00000016460	VARS	100	62.549	ENSPREG00000013264	vars	100	62.226	Poecilia_reticulata
ENSPPYG00000016460	VARS	85	89.048	ENSPCAG00000013565	VARS	86	89.048	Procavia_capensis
ENSPPYG00000016460	VARS	100	93.676	ENSPCOG00000010942	VARS	100	94.150	Propithecus_coquereli
ENSPPYG00000016460	VARS	100	89.794	ENSPVAG00000012403	VARS	100	89.794	Pteropus_vampyrus
ENSPPYG00000016460	VARS	100	63.080	ENSPNYG00000022511	vars	100	63.248	Pundamilia_nyererei
ENSPPYG00000016460	VARS	100	63.072	ENSPNAG00000020962	vars	100	62.917	Pygocentrus_nattereri
ENSPPYG00000016460	VARS	100	91.851	ENSRNOG00000000867	Vars	100	91.851	Rattus_norvegicus
ENSPPYG00000016460	VARS	100	97.310	ENSRBIG00000041669	VARS	100	97.310	Rhinopithecus_bieti
ENSPPYG00000016460	VARS	100	97.310	ENSRROG00000045490	VARS	100	97.310	Rhinopithecus_roxellana
ENSPPYG00000016460	VARS	100	95.807	ENSSBOG00000035402	VARS	100	95.807	Saimiri_boliviensis_boliviensis
ENSPPYG00000016460	VARS	100	79.969	ENSSHAG00000006937	VARS	100	80.204	Sarcophilus_harrisii
ENSPPYG00000016460	VARS	100	63.089	ENSSFOG00015014272	vars	100	63.166	Scleropages_formosus
ENSPPYG00000016460	VARS	100	62.016	ENSSMAG00000009596	vars	99	62.219	Scophthalmus_maximus
ENSPPYG00000016460	VARS	100	62.751	ENSSDUG00000014177	vars	100	62.839	Seriola_dumerili
ENSPPYG00000016460	VARS	100	62.597	ENSSLDG00000025316	vars	100	62.762	Seriola_lalandi_dorsalis
ENSPPYG00000016460	VARS	100	63.672	ENSSPAG00000017068	vars	100	63.396	Stegastes_partitus
ENSPPYG00000016460	VARS	100	91.462	ENSSSCG00000038950	VARS	100	91.937	Sus_scrofa
ENSPPYG00000016460	VARS	81	64.229	ENSTRUG00000012307	vars	95	64.272	Takifugu_rubripes
ENSPPYG00000016460	VARS	100	63.643	ENSTNIG00000008011	vars	100	63.636	Tetraodon_nigroviridis
ENSPPYG00000016460	VARS	54	95.880	ENSTBEG00000004728	-	60	95.880	Tupaia_belangeri
ENSPPYG00000016460	VARS	100	84.494	ENSTTRG00000014128	VARS	100	84.494	Tursiops_truncatus
ENSPPYG00000016460	VARS	100	89.780	ENSUAMG00000010424	VARS	100	89.780	Ursus_americanus
ENSPPYG00000016460	VARS	93	94.603	ENSUMAG00000013486	VARS	98	94.127	Ursus_maritimus
ENSPPYG00000016460	VARS	100	92.490	ENSVVUG00000021323	VARS	100	92.253	Vulpes_vulpes
ENSPPYG00000016460	VARS	96	61.439	ENSXETG00000024076	vars	98	61.246	Xenopus_tropicalis
ENSPPYG00000016460	VARS	100	64.173	ENSXCOG00000019172	vars	100	63.808	Xiphophorus_couchianus
ENSPPYG00000016460	VARS	100	63.969	ENSXMAG00000010927	vars	100	63.608	Xiphophorus_maculatus