EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000017148 (Gene tree)
Gene ID: -
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 23956 bases
Position: chr6:163300997-163324952
Accession: 21185
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000019204	CAF1	PF04857.20	2.3e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000019960	PNLDC1-201	2395	-	ENSPPYP00000019204	530 (aa)	-	H2PKS6

Gene Model

Click here to download ENSPPYG00000017148's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000017148's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000017148	PNLDC1	99	90.584	ENSG00000146453	PNLDC1	99	90.584	Homo_sapiens
ENSPPYG00000017148	PNLDC1	99	80.718	ENSAMEG00000015371	PNLDC1	99	80.718	Ailuropoda_melanoleuca
ENSPPYG00000017148	PNLDC1	95	55.058	ENSAPLG00000007014	PNLDC1	97	55.058	Anas_platyrhynchos
ENSPPYG00000017148	PNLDC1	99	55.926	ENSACAG00000013667	PNLDC1	99	55.926	Anolis_carolinensis
ENSPPYG00000017148	PNLDC1	100	86.466	ENSANAG00000034713	PNLDC1	100	86.466	Aotus_nancymaae
ENSPPYG00000017148	PNLDC1	95	80.671	ENSBTAG00000015166	PNLDC1	96	80.671	Bos_taurus
ENSPPYG00000017148	PNLDC1	100	86.654	ENSCJAG00000011865	PNLDC1	100	86.654	Callithrix_jacchus
ENSPPYG00000017148	PNLDC1	100	82.331	ENSCAFG00000000740	PNLDC1	100	82.331	Canis_familiaris
ENSPPYG00000017148	PNLDC1	100	80.150	ENSCAFG00020017742	PNLDC1	96	88.545	Canis_lupus_dingo
ENSPPYG00000017148	PNLDC1	100	78.947	ENSCHIG00000003141	PNLDC1	100	78.947	Capra_hircus
ENSPPYG00000017148	PNLDC1	100	83.835	ENSTSYG00000005606	PNLDC1	100	83.835	Carlito_syrichta
ENSPPYG00000017148	PNLDC1	100	56.874	ENSCAPG00000011893	PNLDC1	100	56.874	Cavia_aperea
ENSPPYG00000017148	PNLDC1	100	73.823	ENSCPOG00000019565	PNLDC1	100	73.823	Cavia_porcellus
ENSPPYG00000017148	PNLDC1	100	87.594	ENSCCAG00000026232	PNLDC1	100	87.594	Cebus_capucinus
ENSPPYG00000017148	PNLDC1	100	88.534	ENSCATG00000033196	PNLDC1	100	88.534	Cercocebus_atys
ENSPPYG00000017148	PNLDC1	99	77.944	ENSCLAG00000003228	PNLDC1	99	77.944	Chinchilla_lanigera
ENSPPYG00000017148	PNLDC1	95	87.451	ENSCSAG00000012478	PNLDC1	98	87.451	Chlorocebus_sabaeus
ENSPPYG00000017148	PNLDC1	96	60.735	ENSCPBG00000004050	PNLDC1	100	60.735	Chrysemys_picta_bellii
ENSPPYG00000017148	PNLDC1	95	87.968	ENSCANG00000043076	PNLDC1	97	87.968	Colobus_angolensis_palliatus
ENSPPYG00000017148	PNLDC1	100	62.830	ENSCGRG00001011981	-	99	62.830	Cricetulus_griseus_chok1gshd
ENSPPYG00000017148	PNLDC1	100	75.940	ENSCGRG00001007470	-	99	75.940	Cricetulus_griseus_chok1gshd
ENSPPYG00000017148	PNLDC1	100	64.906	ENSCGRG00000003103	-	99	64.906	Cricetulus_griseus_crigri
ENSPPYG00000017148	PNLDC1	100	75.940	ENSCGRG00000010221	-	99	75.940	Cricetulus_griseus_crigri
ENSPPYG00000017148	PNLDC1	100	79.550	ENSDNOG00000013709	PNLDC1	100	79.550	Dasypus_novemcinctus
ENSPPYG00000017148	PNLDC1	100	74.953	ENSDORG00000011517	Pnldc1	100	86.667	Dipodomys_ordii
ENSPPYG00000017148	PNLDC1	93	69.495	ENSETEG00000007587	PNLDC1	99	69.495	Echinops_telfairi
ENSPPYG00000017148	PNLDC1	100	80.519	ENSEASG00005019029	PNLDC1	100	80.519	Equus_asinus_asinus
ENSPPYG00000017148	PNLDC1	100	82.519	ENSECAG00000012898	PNLDC1	100	82.519	Equus_caballus
ENSPPYG00000017148	PNLDC1	100	81.955	ENSFCAG00000002848	PNLDC1	100	81.955	Felis_catus
ENSPPYG00000017148	PNLDC1	94	54.134	ENSFALG00000012081	PNLDC1	99	54.134	Ficedula_albicollis
ENSPPYG00000017148	PNLDC1	100	78.195	ENSFDAG00000021334	PNLDC1	100	78.195	Fukomys_damarensis
ENSPPYG00000017148	PNLDC1	79	53.991	ENSGALG00000011624	PNLDC1	82	53.991	Gallus_gallus
ENSPPYG00000017148	PNLDC1	99	61.121	ENSGAGG00000015276	PNLDC1	100	61.759	Gopherus_agassizii
ENSPPYG00000017148	PNLDC1	100	90.602	ENSGGOG00000014077	PNLDC1	100	90.602	Gorilla_gorilla
ENSPPYG00000017148	PNLDC1	100	78.918	ENSHGLG00000006889	PNLDC1	100	78.918	Heterocephalus_glaber_female
ENSPPYG00000017148	PNLDC1	100	78.918	ENSHGLG00100018275	PNLDC1	100	78.918	Heterocephalus_glaber_male
ENSPPYG00000017148	PNLDC1	99	83.019	ENSSTOG00000005595	PNLDC1	99	83.019	Ictidomys_tridecemlineatus
ENSPPYG00000017148	PNLDC1	100	74.074	ENSJJAG00000009937	Pnldc1	99	74.074	Jaculus_jaculus
ENSPPYG00000017148	PNLDC1	60	83.333	ENSLAFG00000030189	PNLDC1	93	83.333	Loxodonta_africana
ENSPPYG00000017148	PNLDC1	100	88.722	ENSMFAG00000041296	PNLDC1	100	88.722	Macaca_fascicularis
ENSPPYG00000017148	PNLDC1	100	88.722	ENSMMUG00000004181	PNLDC1	100	88.722	Macaca_mulatta
ENSPPYG00000017148	PNLDC1	100	88.534	ENSMNEG00000034271	PNLDC1	100	88.534	Macaca_nemestrina
ENSPPYG00000017148	PNLDC1	100	85.150	ENSMLEG00000044059	PNLDC1	100	85.150	Mandrillus_leucophaeus
ENSPPYG00000017148	PNLDC1	95	54.191	ENSMGAG00000012470	PNLDC1	97	54.191	Meleagris_gallopavo
ENSPPYG00000017148	PNLDC1	99	65.348	ENSMAUG00000012298	Pnldc1	100	65.348	Mesocricetus_auratus
ENSPPYG00000017148	PNLDC1	100	82.430	ENSMICG00000008021	PNLDC1	100	82.430	Microcebus_murinus
ENSPPYG00000017148	PNLDC1	100	80.337	ENSMOCG00000014287	Pnldc1	100	80.337	Microtus_ochrogaster
ENSPPYG00000017148	PNLDC1	99	68.529	ENSMODG00000007420	PNLDC1	99	68.529	Monodelphis_domestica
ENSPPYG00000017148	PNLDC1	100	80.639	MGP_CAROLIEiJ_G0021045	Pnldc1	100	80.639	Mus_caroli
ENSPPYG00000017148	PNLDC1	100	80.827	ENSMUSG00000073460	Pnldc1	99	87.580	Mus_musculus
ENSPPYG00000017148	PNLDC1	100	80.827	MGP_PahariEiJ_G0023361	Pnldc1	100	80.827	Mus_pahari
ENSPPYG00000017148	PNLDC1	100	80.451	MGP_SPRETEiJ_G0021975	Pnldc1	100	80.451	Mus_spretus
ENSPPYG00000017148	PNLDC1	99	81.168	ENSMPUG00000004920	PNLDC1	99	81.168	Mustela_putorius_furo
ENSPPYG00000017148	PNLDC1	100	81.391	ENSMLUG00000000747	PNLDC1	100	81.391	Myotis_lucifugus
ENSPPYG00000017148	PNLDC1	100	81.579	ENSNGAG00000017714	Pnldc1	99	81.579	Nannospalax_galili
ENSPPYG00000017148	PNLDC1	95	89.370	ENSNLEG00000011282	PNLDC1	98	89.370	Nomascus_leucogenys
ENSPPYG00000017148	PNLDC1	60	55.864	ENSMEUG00000011926	-	64	55.864	Notamacropus_eugenii
ENSPPYG00000017148	PNLDC1	54	56.849	ENSMEUG00000014042	-	100	56.849	Notamacropus_eugenii
ENSPPYG00000017148	PNLDC1	78	86.364	ENSOPRG00000003813	PNLDC1	79	86.364	Ochotona_princeps
ENSPPYG00000017148	PNLDC1	100	78.383	ENSODEG00000008047	PNLDC1	100	78.383	Octodon_degus
ENSPPYG00000017148	PNLDC1	99	53.672	ENSOANG00000012199	PNLDC1	99	55.932	Ornithorhynchus_anatinus
ENSPPYG00000017148	PNLDC1	100	80.263	ENSOCUG00000013867	PNLDC1	100	80.263	Oryctolagus_cuniculus
ENSPPYG00000017148	PNLDC1	99	83.114	ENSOGAG00000007331	PNLDC1	100	83.114	Otolemur_garnettii
ENSPPYG00000017148	PNLDC1	100	78.947	ENSOARG00000004585	PNLDC1	100	78.947	Ovis_aries
ENSPPYG00000017148	PNLDC1	100	89.850	ENSPPAG00000026651	PNLDC1	100	89.850	Pan_paniscus
ENSPPYG00000017148	PNLDC1	100	81.955	ENSPPRG00000012854	PNLDC1	100	81.955	Panthera_pardus
ENSPPYG00000017148	PNLDC1	98	77.714	ENSPTIG00000011501	PNLDC1	98	77.714	Panthera_tigris_altaica
ENSPPYG00000017148	PNLDC1	100	89.850	ENSPTRG00000018762	PNLDC1	100	89.850	Pan_troglodytes
ENSPPYG00000017148	PNLDC1	100	88.910	ENSPANG00000022009	PNLDC1	100	88.910	Papio_anubis
ENSPPYG00000017148	PNLDC1	100	81.203	ENSPEMG00000016301	Pnldc1	99	81.203	Peromyscus_maniculatus_bairdii
ENSPPYG00000017148	PNLDC1	86	30.143	ENSPMAG00000003956	parn	90	30.346	Petromyzon_marinus
ENSPPYG00000017148	PNLDC1	80	70.115	ENSPCIG00000023412	PNLDC1	97	70.115	Phascolarctos_cinereus
ENSPPYG00000017148	PNLDC1	99	73.535	ENSPCAG00000014169	PNLDC1	99	73.535	Procavia_capensis
ENSPPYG00000017148	PNLDC1	100	83.022	ENSPCOG00000025722	PNLDC1	100	83.022	Propithecus_coquereli
ENSPPYG00000017148	PNLDC1	72	82.124	ENSPVAG00000005325	PNLDC1	73	82.124	Pteropus_vampyrus
ENSPPYG00000017148	PNLDC1	100	80.451	ENSRNOG00000023140	Pnldc1	100	86.250	Rattus_norvegicus
ENSPPYG00000017148	PNLDC1	100	88.346	ENSRBIG00000033806	PNLDC1	100	88.346	Rhinopithecus_bieti
ENSPPYG00000017148	PNLDC1	95	88.166	ENSRROG00000043919	PNLDC1	97	88.166	Rhinopithecus_roxellana
ENSPPYG00000017148	PNLDC1	100	87.594	ENSSBOG00000019135	PNLDC1	100	87.594	Saimiri_boliviensis_boliviensis
ENSPPYG00000017148	PNLDC1	95	69.591	ENSSHAG00000015192	PNLDC1	97	69.591	Sarcophilus_harrisii
ENSPPYG00000017148	PNLDC1	55	64.261	ENSSPUG00000004627	PNLDC1	95	66.355	Sphenodon_punctatus
ENSPPYG00000017148	PNLDC1	96	79.452	ENSSSCG00000004046	PNLDC1	99	79.452	Sus_scrofa
ENSPPYG00000017148	PNLDC1	91	54.898	ENSTGUG00000011418	PNLDC1	99	54.898	Taeniopygia_guttata
ENSPPYG00000017148	PNLDC1	96	71.429	ENSTBEG00000009131	PNLDC1	98	71.429	Tupaia_belangeri
ENSPPYG00000017148	PNLDC1	72	78.497	ENSTTRG00000010409	PNLDC1	72	78.497	Tursiops_truncatus
ENSPPYG00000017148	PNLDC1	99	72.356	ENSUAMG00000015783	PNLDC1	99	72.356	Ursus_americanus
ENSPPYG00000017148	PNLDC1	95	77.388	ENSUMAG00000011903	PNLDC1	99	77.388	Ursus_maritimus
ENSPPYG00000017148	PNLDC1	96	82.812	ENSVVUG00000006586	PNLDC1	99	81.762	Vulpes_vulpes