EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000017975 (Gene tree)
Gene ID: 100441187
Gene Symbol: RBM28
Alias: FLJ10377
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 33454 bases
Position: chr7:125364646-125398099
Accession: 21863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000020164	RRM_1	PF00076.22	9.6e-57	1	3
ENSPPYP00000020164	RRM_1	PF00076.22	9.6e-57	2	3
ENSPPYP00000020164	RRM_1	PF00076.22	9.6e-57	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000020957	RBM28-201	2398	-	ENSPPYP00000020164	757 (aa)	-	H2PNF2

Gene Model

Click here to download ENSPPYG00000017975's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000017975's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000017975	RBM28	100	99.209	ENSG00000106344	RBM28	100	100.000	Homo_sapiens
ENSPPYG00000017975	RBM28	57	54.751	ENSAPOG00000015512	rbm28	100	50.688	Acanthochromis_polyacanthus
ENSPPYG00000017975	RBM28	100	93.478	ENSAMEG00000004776	RBM28	92	93.478	Ailuropoda_melanoleuca
ENSPPYG00000017975	RBM28	55	54.779	ENSACIG00000023153	rbm28	100	51.230	Amphilophus_citrinellus
ENSPPYG00000017975	RBM28	57	54.157	ENSAOCG00000000462	rbm28	100	51.690	Amphiprion_ocellaris
ENSPPYG00000017975	RBM28	57	53.933	ENSAPEG00000012996	rbm28	100	51.443	Amphiprion_percula
ENSPPYG00000017975	RBM28	58	50.737	ENSATEG00000001672	rbm28	66	50.196	Anabas_testudineus
ENSPPYG00000017975	RBM28	100	94.063	ENSANAG00000033922	RBM28	100	93.272	Aotus_nancymaae
ENSPPYG00000017975	RBM28	100	50.128	ENSACLG00000025024	rbm28	100	49.504	Astatotilapia_calliptera
ENSPPYG00000017975	RBM28	58	58.636	ENSAMXG00000000763	rbm28	99	59.060	Astyanax_mexicanus
ENSPPYG00000017975	RBM28	100	84.321	ENSBTAG00000017001	RBM28	100	100.000	Bos_taurus
ENSPPYG00000017975	RBM28	100	92.116	ENSCJAG00000017731	RBM28	100	93.035	Callithrix_jacchus
ENSPPYG00000017975	RBM28	100	85.771	ENSCAFG00000001667	RBM28	100	85.507	Canis_familiaris
ENSPPYG00000017975	RBM28	100	85.771	ENSCAFG00020021648	RBM28	100	85.507	Canis_lupus_dingo
ENSPPYG00000017975	RBM28	100	84.321	ENSCHIG00000014146	RBM28	100	83.926	Capra_hircus
ENSPPYG00000017975	RBM28	100	85.864	ENSTSYG00000002892	RBM28	100	95.000	Carlito_syrichta
ENSPPYG00000017975	RBM28	84	62.205	ENSCAPG00000013218	RBM28	100	62.047	Cavia_aperea
ENSPPYG00000017975	RBM28	100	83.399	ENSCPOG00000006253	RBM28	100	83.794	Cavia_porcellus
ENSPPYG00000017975	RBM28	100	93.140	ENSCCAG00000035105	RBM28	100	93.931	Cebus_capucinus
ENSPPYG00000017975	RBM28	100	95.007	ENSCATG00000040497	RBM28	100	97.500	Cercocebus_atys
ENSPPYG00000017975	RBM28	100	79.974	ENSCLAG00000003707	RBM28	100	80.501	Chinchilla_lanigera
ENSPPYG00000017975	RBM28	100	96.570	ENSCSAG00000010161	RBM28	100	96.570	Chlorocebus_sabaeus
ENSPPYG00000017975	RBM28	57	88.710	ENSCHOG00000001994	-	63	88.710	Choloepus_hoffmanni
ENSPPYG00000017975	RBM28	51	61.731	ENSCPBG00000018088	RBM28	87	59.871	Chrysemys_picta_bellii
ENSPPYG00000017975	RBM28	69	41.752	ENSCING00000009238	-	68	42.169	Ciona_intestinalis
ENSPPYG00000017975	RBM28	90	95.706	ENSCANG00000038397	RBM28	100	100.000	Colobus_angolensis_palliatus
ENSPPYG00000017975	RBM28	65	81.891	ENSCGRG00001021278	Rbm28	100	79.156	Cricetulus_griseus_chok1gshd
ENSPPYG00000017975	RBM28	100	80.603	ENSCGRG00000005098	Rbm28	100	80.472	Cricetulus_griseus_crigri
ENSPPYG00000017975	RBM28	100	49.362	ENSCSEG00000004212	rbm28	100	49.299	Cynoglossus_semilaevis
ENSPPYG00000017975	RBM28	58	55.111	ENSCVAG00000010493	rbm28	99	47.990	Cyprinodon_variegatus
ENSPPYG00000017975	RBM28	59	48.052	ENSDARG00000025332	rbm28	100	46.753	Danio_rerio
ENSPPYG00000017975	RBM28	100	85.375	ENSDNOG00000001124	RBM28	100	85.507	Dasypus_novemcinctus
ENSPPYG00000017975	RBM28	65	81.855	ENSDORG00000004184	Rbm28	97	81.855	Dipodomys_ordii
ENSPPYG00000017975	RBM28	100	71.597	ENSETEG00000007130	RBM28	99	71.728	Echinops_telfairi
ENSPPYG00000017975	RBM28	99	40.155	ENSEBUG00000004419	rbm28	65	42.505	Eptatretus_burgeri
ENSPPYG00000017975	RBM28	100	85.137	ENSEASG00005008528	RBM28	100	85.658	Equus_asinus_asinus
ENSPPYG00000017975	RBM28	100	84.635	ENSECAG00000007745	RBM28	100	85.156	Equus_caballus
ENSPPYG00000017975	RBM28	100	76.247	ENSEEUG00000002389	RBM28	100	76.509	Erinaceus_europaeus
ENSPPYG00000017975	RBM28	100	52.963	ENSELUG00000020602	rbm28	100	52.196	Esox_lucius
ENSPPYG00000017975	RBM28	100	84.190	ENSFCAG00000000946	RBM28	100	100.000	Felis_catus
ENSPPYG00000017975	RBM28	100	85.771	ENSFDAG00000010169	RBM28	100	86.034	Fukomys_damarensis
ENSPPYG00000017975	RBM28	57	52.511	ENSGMOG00000007091	rbm28	65	49.790	Gadus_morhua
ENSPPYG00000017975	RBM28	58	55.481	ENSGAFG00000004802	rbm28	97	54.525	Gambusia_affinis
ENSPPYG00000017975	RBM28	57	55.862	ENSGACG00000012612	rbm28	82	52.410	Gasterosteus_aculeatus
ENSPPYG00000017975	RBM28	82	70.443	ENSGAGG00000008873	RBM28	85	79.670	Gopherus_agassizii
ENSPPYG00000017975	RBM28	95	98.609	ENSGGOG00000004644	RBM28	97	98.609	Gorilla_gorilla
ENSPPYG00000017975	RBM28	91	51.994	ENSHBUG00000009611	rbm28	94	52.443	Haplochromis_burtoni
ENSPPYG00000017975	RBM28	100	85.639	ENSHGLG00000005409	RBM28	100	85.639	Heterocephalus_glaber_female
ENSPPYG00000017975	RBM28	100	85.639	ENSHGLG00100016458	RBM28	100	84.848	Heterocephalus_glaber_male
ENSPPYG00000017975	RBM28	63	45.833	ENSIPUG00000007103	rbm28	98	46.748	Ictalurus_punctatus
ENSPPYG00000017975	RBM28	100	85.379	ENSSTOG00000002169	RBM28	100	85.901	Ictidomys_tridecemlineatus
ENSPPYG00000017975	RBM28	100	75.228	ENSJJAG00000022400	Rbm28	100	75.591	Jaculus_jaculus
ENSPPYG00000017975	RBM28	58	55.506	ENSKMAG00000013348	rbm28	99	50.378	Kryptolebias_marmoratus
ENSPPYG00000017975	RBM28	57	56.404	ENSLBEG00000012998	rbm28	100	50.127	Labrus_bergylta
ENSPPYG00000017975	RBM28	74	57.597	ENSLACG00000010485	-	100	56.392	Latimeria_chalumnae
ENSPPYG00000017975	RBM28	90	62.564	ENSLOCG00000015541	rbm28	80	62.371	Lepisosteus_oculatus
ENSPPYG00000017975	RBM28	100	83.267	ENSLAFG00000010717	RBM28	100	83.267	Loxodonta_africana
ENSPPYG00000017975	RBM28	100	95.926	ENSMFAG00000031036	RBM28	100	97.500	Macaca_fascicularis
ENSPPYG00000017975	RBM28	100	96.063	ENSMMUG00000007250	RBM28	100	97.500	Macaca_mulatta
ENSPPYG00000017975	RBM28	100	95.300	ENSMNEG00000036970	RBM28	100	97.500	Macaca_nemestrina
ENSPPYG00000017975	RBM28	84	96.588	ENSMLEG00000037717	RBM28	100	96.588	Mandrillus_leucophaeus
ENSPPYG00000017975	RBM28	100	50.441	ENSMAMG00000008525	rbm28	100	50.446	Mastacembelus_armatus
ENSPPYG00000017975	RBM28	93	49.386	ENSMZEG00005019625	rbm28	69	53.213	Maylandia_zebra
ENSPPYG00000017975	RBM28	65	79.276	ENSMAUG00000002263	Rbm28	100	78.149	Mesocricetus_auratus
ENSPPYG00000017975	RBM28	93	84.903	ENSMICG00000000107	RBM28	100	85.319	Microcebus_murinus
ENSPPYG00000017975	RBM28	100	81.340	ENSMOCG00000014615	Rbm28	100	80.815	Microtus_ochrogaster
ENSPPYG00000017975	RBM28	57	54.253	ENSMMOG00000008600	rbm28	99	52.282	Mola_mola
ENSPPYG00000017975	RBM28	100	72.120	ENSMODG00000015151	RBM28	100	73.037	Monodelphis_domestica
ENSPPYG00000017975	RBM28	58	54.102	ENSMALG00000006419	rbm28	100	49.686	Monopterus_albus
ENSPPYG00000017975	RBM28	100	81.447	MGP_CAROLIEiJ_G0028162	Rbm28	100	80.921	Mus_caroli
ENSPPYG00000017975	RBM28	100	80.921	ENSMUSG00000029701	Rbm28	100	80.789	Mus_musculus
ENSPPYG00000017975	RBM28	100	81.184	MGP_PahariEiJ_G0021920	Rbm28	100	81.053	Mus_pahari
ENSPPYG00000017975	RBM28	100	81.184	MGP_SPRETEiJ_G0029162	Rbm28	100	81.053	Mus_spretus
ENSPPYG00000017975	RBM28	100	85.283	ENSMPUG00000006511	RBM28	100	83.574	Mustela_putorius_furo
ENSPPYG00000017975	RBM28	100	84.908	ENSMLUG00000002186	RBM28	100	85.433	Myotis_lucifugus
ENSPPYG00000017975	RBM28	100	79.315	ENSNGAG00000017946	-	100	79.051	Nannospalax_galili
ENSPPYG00000017975	RBM28	100	81.950	ENSNGAG00000006480	-	100	81.028	Nannospalax_galili
ENSPPYG00000017975	RBM28	100	97.248	ENSNLEG00000012307	RBM28	100	100.000	Nomascus_leucogenys
ENSPPYG00000017975	RBM28	81	87.500	ENSMEUG00000009611	RBM28	91	87.500	Notamacropus_eugenii
ENSPPYG00000017975	RBM28	90	77.290	ENSOPRG00000015140	RBM28	90	77.481	Ochotona_princeps
ENSPPYG00000017975	RBM28	100	80.369	ENSODEG00000003213	-	100	79.710	Octodon_degus
ENSPPYG00000017975	RBM28	76	88.161	ENSODEG00000013217	-	83	88.161	Octodon_degus
ENSPPYG00000017975	RBM28	58	53.111	ENSONIG00000014924	rbm28	100	49.747	Oreochromis_niloticus
ENSPPYG00000017975	RBM28	100	63.918	ENSOANG00000000815	-	100	64.295	Ornithorhynchus_anatinus
ENSPPYG00000017975	RBM28	100	82.269	ENSOCUG00000003009	RBM28	100	82.269	Oryctolagus_cuniculus
ENSPPYG00000017975	RBM28	99	49.496	ENSORLG00000009636	rbm28	64	52.361	Oryzias_latipes
ENSPPYG00000017975	RBM28	58	54.853	ENSORLG00020002123	rbm28	99	50.130	Oryzias_latipes_hni
ENSPPYG00000017975	RBM28	84	62.136	ENSORLG00015015030	rbm28	97	60.784	Oryzias_latipes_hsok
ENSPPYG00000017975	RBM28	58	57.301	ENSOMEG00000007801	rbm28	100	50.251	Oryzias_melastigma
ENSPPYG00000017975	RBM28	82	92.500	ENSOGAG00000006011	RBM28	100	92.500	Otolemur_garnettii
ENSPPYG00000017975	RBM28	100	83.990	ENSOARG00000002547	RBM28	100	83.858	Ovis_aries
ENSPPYG00000017975	RBM28	100	98.686	ENSPPAG00000041730	RBM28	100	100.000	Pan_paniscus
ENSPPYG00000017975	RBM28	100	84.079	ENSPPRG00000004420	RBM28	100	100.000	Panthera_pardus
ENSPPYG00000017975	RBM28	100	84.321	ENSPTIG00000008550	RBM28	100	100.000	Panthera_tigris_altaica
ENSPPYG00000017975	RBM28	100	98.949	ENSPTRG00000019659	RBM28	100	100.000	Pan_troglodytes
ENSPPYG00000017975	RBM28	100	96.063	ENSPANG00000022295	RBM28	100	97.500	Papio_anubis
ENSPPYG00000017975	RBM28	99	50.993	ENSPKIG00000023453	rbm28	67	50.857	Paramormyrops_kingsleyae
ENSPPYG00000017975	RBM28	87	53.975	ENSPMGG00000012840	rbm28	100	47.826	Periophthalmus_magnuspinnatus
ENSPPYG00000017975	RBM28	100	78.553	ENSPEMG00000020673	Rbm28	100	78.158	Peromyscus_maniculatus_bairdii
ENSPPYG00000017975	RBM28	100	71.466	ENSPCIG00000012810	RBM28	100	71.990	Phascolarctos_cinereus
ENSPPYG00000017975	RBM28	58	56.125	ENSPFOG00000018209	rbm28	100	49.112	Poecilia_formosa
ENSPPYG00000017975	RBM28	57	55.180	ENSPLAG00000016078	rbm28	96	50.129	Poecilia_latipinna
ENSPPYG00000017975	RBM28	58	56.125	ENSPMEG00000004292	rbm28	100	49.112	Poecilia_mexicana
ENSPPYG00000017975	RBM28	56	54.713	ENSPREG00000014287	rbm28	98	48.571	Poecilia_reticulata
ENSPPYG00000017975	RBM28	74	75.493	ENSPCAG00000008223	RBM28	83	75.556	Procavia_capensis
ENSPPYG00000017975	RBM28	100	86.589	ENSPCOG00000016797	RBM28	100	100.000	Propithecus_coquereli
ENSPPYG00000017975	RBM28	77	91.628	ENSPVAG00000005443	RBM28	76	91.628	Pteropus_vampyrus
ENSPPYG00000017975	RBM28	100	49.624	ENSPNYG00000014003	rbm28	64	52.515	Pundamilia_nyererei
ENSPPYG00000017975	RBM28	100	79.737	ENSRNOG00000005468	Rbm28	100	79.474	Rattus_norvegicus
ENSPPYG00000017975	RBM28	100	95.806	ENSRBIG00000033990	RBM28	100	100.000	Rhinopithecus_bieti
ENSPPYG00000017975	RBM28	100	95.932	ENSRROG00000040747	RBM28	100	100.000	Rhinopithecus_roxellana
ENSPPYG00000017975	RBM28	85	88.451	ENSSBOG00000012308	RBM28	100	89.764	Saimiri_boliviensis_boliviensis
ENSPPYG00000017975	RBM28	96	67.891	ENSSHAG00000017017	RBM28	99	67.204	Sarcophilus_harrisii
ENSPPYG00000017975	RBM28	58	52.620	ENSSMAG00000003885	rbm28	98	50.731	Scophthalmus_maximus
ENSPPYG00000017975	RBM28	58	55.902	ENSSLDG00000020099	rbm28	100	50.512	Seriola_lalandi_dorsalis
ENSPPYG00000017975	RBM28	76	85.464	ENSSARG00000008303	RBM28	81	85.464	Sorex_araneus
ENSPPYG00000017975	RBM28	66	73.529	ENSSPUG00000000838	RBM28	79	73.529	Sphenodon_punctatus
ENSPPYG00000017975	RBM28	57	52.980	ENSSPAG00000023305	rbm28	100	46.966	Stegastes_partitus
ENSPPYG00000017975	RBM28	100	85.903	ENSSSCG00000031847	RBM28	100	85.639	Sus_scrofa
ENSPPYG00000017975	RBM28	99	51.239	ENSTNIG00000017962	rbm28	99	51.108	Tetraodon_nigroviridis
ENSPPYG00000017975	RBM28	86	87.870	ENSTBEG00000012749	RBM28	94	72.067	Tupaia_belangeri
ENSPPYG00000017975	RBM28	100	83.026	ENSTTRG00000013647	RBM28	100	83.158	Tursiops_truncatus
ENSPPYG00000017975	RBM28	100	77.734	ENSUAMG00000006949	RBM28	100	77.953	Ursus_americanus
ENSPPYG00000017975	RBM28	100	85.375	ENSUMAG00000005997	RBM28	100	85.112	Ursus_maritimus
ENSPPYG00000017975	RBM28	88	77.293	ENSVPAG00000008304	RBM28	87	76.692	Vicugna_pacos
ENSPPYG00000017975	RBM28	100	85.507	ENSVVUG00000007270	RBM28	100	85.244	Vulpes_vulpes
ENSPPYG00000017975	RBM28	99	56.645	ENSXETG00000009271	rbm28	99	56.645	Xenopus_tropicalis
ENSPPYG00000017975	RBM28	58	53.531	ENSXCOG00000020357	rbm28	99	51.782	Xiphophorus_couchianus
ENSPPYG00000017975	RBM28	57	54.260	ENSXMAG00000004415	rbm28	100	49.105	Xiphophorus_maculatus