EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000017998 (Gene tree)
Gene ID: 100174537
Gene Symbol: ZC3HC1
Alias: NIPA
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 42744 bases
Position: chr7:126938439-126981182
Accession: 29913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000020194	zf-C3HC	PF07967.13	1.5e-27	1	1
ENSPPYP00000020193	zf-C3HC	PF07967.13	5.8e-26	1	1
ENSPPYP00000020194	Rsm1	PF08600.10	2.4e-16	1	1
ENSPPYP00000020193	Rsm1	PF08600.10	6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000020986	ZC3HC1-201	1939	-	ENSPPYP00000020193	503 (aa)	-	H2PNI0
ENSPPYT00000020987	ZC3HC1-202	1807	-	ENSPPYP00000020194	459 (aa)	-	H2PNI1

Gene Model

Click here to download ENSPPYG00000017998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000017998's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000017998	ZC3HC1	100	90.079	ENSG00000091732	ZC3HC1	100	100.000	Homo_sapiens
ENSPPYG00000017998	ZC3HC1	94	42.653	ENSAPOG00000009078	zc3hc1	95	41.650	Acanthochromis_polyacanthus
ENSPPYG00000017998	ZC3HC1	99	83.168	ENSAMEG00000005425	ZC3HC1	99	83.168	Ailuropoda_melanoleuca
ENSPPYG00000017998	ZC3HC1	95	40.562	ENSACIG00000019513	zc3hc1	95	40.000	Amphilophus_citrinellus
ENSPPYG00000017998	ZC3HC1	94	42.857	ENSAOCG00000024310	zc3hc1	95	41.851	Amphiprion_ocellaris
ENSPPYG00000017998	ZC3HC1	94	42.857	ENSAPEG00000004907	zc3hc1	95	41.851	Amphiprion_percula
ENSPPYG00000017998	ZC3HC1	81	45.540	ENSATEG00000016898	zc3hc1	85	44.626	Anabas_testudineus
ENSPPYG00000017998	ZC3HC1	88	55.705	ENSAPLG00000003832	ZC3HC1	99	55.809	Anas_platyrhynchos
ENSPPYG00000017998	ZC3HC1	94	56.468	ENSACAG00000001638	ZC3HC1	94	56.468	Anolis_carolinensis
ENSPPYG00000017998	ZC3HC1	99	87.897	ENSANAG00000022213	ZC3HC1	98	93.137	Aotus_nancymaae
ENSPPYG00000017998	ZC3HC1	86	42.478	ENSACLG00000025033	zc3hc1	94	41.814	Astatotilapia_calliptera
ENSPPYG00000017998	ZC3HC1	93	55.000	ENSAMXG00000036792	zc3hc1	97	40.206	Astyanax_mexicanus
ENSPPYG00000017998	ZC3HC1	99	82.903	ENSBTAG00000011247	ZC3HC1	99	82.903	Bos_taurus
ENSPPYG00000017998	ZC3HC1	99	86.680	ENSCJAG00000010536	ZC3HC1	98	92.647	Callithrix_jacchus
ENSPPYG00000017998	ZC3HC1	99	85.089	ENSCAFG00000031850	-	99	85.089	Canis_familiaris
ENSPPYG00000017998	ZC3HC1	99	85.089	ENSCAFG00000029401	-	98	85.089	Canis_familiaris
ENSPPYG00000017998	ZC3HC1	99	84.783	ENSCAFG00000001499	-	98	84.783	Canis_familiaris
ENSPPYG00000017998	ZC3HC1	99	85.089	ENSCAFG00000028735	-	99	85.089	Canis_familiaris
ENSPPYG00000017998	ZC3HC1	99	85.743	ENSCAFG00020023333	-	99	85.743	Canis_lupus_dingo
ENSPPYG00000017998	ZC3HC1	99	84.891	ENSCAFG00020006829	-	99	84.891	Canis_lupus_dingo
ENSPPYG00000017998	ZC3HC1	99	77.888	ENSCHIG00000014103	ZC3HC1	99	77.888	Capra_hircus
ENSPPYG00000017998	ZC3HC1	99	83.698	ENSTSYG00000002843	ZC3HC1	99	83.698	Carlito_syrichta
ENSPPYG00000017998	ZC3HC1	89	68.571	ENSCAPG00000016300	ZC3HC1	99	68.106	Cavia_aperea
ENSPPYG00000017998	ZC3HC1	99	77.137	ENSCPOG00000014034	ZC3HC1	99	76.541	Cavia_porcellus
ENSPPYG00000017998	ZC3HC1	99	84.716	ENSCCAG00000020384	ZC3HC1	99	94.690	Cebus_capucinus
ENSPPYG00000017998	ZC3HC1	99	89.662	ENSCATG00000023130	ZC3HC1	99	89.662	Cercocebus_atys
ENSPPYG00000017998	ZC3HC1	99	66.524	ENSCLAG00000008260	ZC3HC1	99	63.312	Chinchilla_lanigera
ENSPPYG00000017998	ZC3HC1	73	88.556	ENSCSAG00000009881	ZC3HC1	97	88.556	Chlorocebus_sabaeus
ENSPPYG00000017998	ZC3HC1	90	82.561	ENSCHOG00000011846	ZC3HC1	99	82.561	Choloepus_hoffmanni
ENSPPYG00000017998	ZC3HC1	96	62.218	ENSCPBG00000017519	ZC3HC1	99	61.386	Chrysemys_picta_bellii
ENSPPYG00000017998	ZC3HC1	99	89.662	ENSCANG00000029091	ZC3HC1	98	94.118	Colobus_angolensis_palliatus
ENSPPYG00000017998	ZC3HC1	99	79.125	ENSCGRG00001018805	Zc3hc1	99	79.125	Cricetulus_griseus_chok1gshd
ENSPPYG00000017998	ZC3HC1	99	80.080	ENSCGRG00000017114	Zc3hc1	99	80.080	Cricetulus_griseus_crigri
ENSPPYG00000017998	ZC3HC1	96	40.000	ENSCSEG00000009284	zc3hc1	94	39.406	Cynoglossus_semilaevis
ENSPPYG00000017998	ZC3HC1	94	39.394	ENSCVAG00000011566	zc3hc1	94	38.788	Cyprinodon_variegatus
ENSPPYG00000017998	ZC3HC1	95	43.149	ENSDARG00000062651	zc3hc1	97	42.222	Danio_rerio
ENSPPYG00000017998	ZC3HC1	99	81.909	ENSDNOG00000045016	ZC3HC1	99	81.909	Dasypus_novemcinctus
ENSPPYG00000017998	ZC3HC1	99	72.510	ENSDORG00000008697	Zc3hc1	99	72.510	Dipodomys_ordii
ENSPPYG00000017998	ZC3HC1	90	83.444	ENSEASG00005008789	ZC3HC1	97	83.444	Equus_asinus_asinus
ENSPPYG00000017998	ZC3HC1	99	83.532	ENSECAG00000017886	ZC3HC1	99	83.532	Equus_caballus
ENSPPYG00000017998	ZC3HC1	83	83.851	ENSEEUG00000003123	ZC3HC1	83	83.851	Erinaceus_europaeus
ENSPPYG00000017998	ZC3HC1	94	40.162	ENSELUG00000023168	zc3hc1	94	41.968	Esox_lucius
ENSPPYG00000017998	ZC3HC1	99	83.499	ENSFCAG00000010429	ZC3HC1	99	83.499	Felis_catus
ENSPPYG00000017998	ZC3HC1	90	54.390	ENSFALG00000005006	ZC3HC1	99	54.390	Ficedula_albicollis
ENSPPYG00000017998	ZC3HC1	99	79.722	ENSFDAG00000019897	ZC3HC1	99	79.722	Fukomys_damarensis
ENSPPYG00000017998	ZC3HC1	95	40.486	ENSFHEG00000020149	zc3hc1	99	38.596	Fundulus_heteroclitus
ENSPPYG00000017998	ZC3HC1	94	38.477	ENSGMOG00000002914	zc3hc1	95	37.681	Gadus_morhua
ENSPPYG00000017998	ZC3HC1	97	57.287	ENSGALG00000008003	ZC3HC1	99	57.287	Gallus_gallus
ENSPPYG00000017998	ZC3HC1	95	39.406	ENSGAFG00000016095	zc3hc1	95	38.856	Gambusia_affinis
ENSPPYG00000017998	ZC3HC1	94	42.623	ENSGACG00000019706	zc3hc1	94	42.653	Gasterosteus_aculeatus
ENSPPYG00000017998	ZC3HC1	78	63.520	ENSGAGG00000016106	ZC3HC1	99	63.520	Gopherus_agassizii
ENSPPYG00000017998	ZC3HC1	100	89.881	ENSGGOG00000015504	ZC3HC1	99	95.122	Gorilla_gorilla
ENSPPYG00000017998	ZC3HC1	94	40.937	ENSHBUG00000008347	zc3hc1	94	40.326	Haplochromis_burtoni
ENSPPYG00000017998	ZC3HC1	99	80.318	ENSHGLG00000005085	ZC3HC1	99	80.318	Heterocephalus_glaber_female
ENSPPYG00000017998	ZC3HC1	99	80.119	ENSHGLG00100011395	ZC3HC1	99	80.119	Heterocephalus_glaber_male
ENSPPYG00000017998	ZC3HC1	95	40.164	ENSHCOG00000014309	zc3hc1	95	40.082	Hippocampus_comes
ENSPPYG00000017998	ZC3HC1	99	81.909	ENSSTOG00000023599	-	99	81.909	Ictidomys_tridecemlineatus
ENSPPYG00000017998	ZC3HC1	94	40.854	ENSKMAG00000015315	zc3hc1	88	39.837	Kryptolebias_marmoratus
ENSPPYG00000017998	ZC3HC1	95	40.954	ENSLBEG00000017325	zc3hc1	95	40.079	Labrus_bergylta
ENSPPYG00000017998	ZC3HC1	79	49.878	ENSLACG00000013032	ZC3HC1	97	49.878	Latimeria_chalumnae
ENSPPYG00000017998	ZC3HC1	97	46.881	ENSLOCG00000015963	zc3hc1	97	47.390	Lepisosteus_oculatus
ENSPPYG00000017998	ZC3HC1	99	81.854	ENSLAFG00000001292	ZC3HC1	99	81.854	Loxodonta_africana
ENSPPYG00000017998	ZC3HC1	99	89.861	ENSMFAG00000030176	ZC3HC1	99	89.861	Macaca_fascicularis
ENSPPYG00000017998	ZC3HC1	99	90.675	ENSMMUG00000006155	ZC3HC1	99	90.675	Macaca_mulatta
ENSPPYG00000017998	ZC3HC1	99	90.060	ENSMNEG00000011833	ZC3HC1	99	97.156	Macaca_nemestrina
ENSPPYG00000017998	ZC3HC1	99	89.861	ENSMLEG00000027328	ZC3HC1	98	94.608	Mandrillus_leucophaeus
ENSPPYG00000017998	ZC3HC1	94	41.837	ENSMAMG00000010691	zc3hc1	94	41.260	Mastacembelus_armatus
ENSPPYG00000017998	ZC3HC1	94	40.733	ENSMZEG00005007142	zc3hc1	94	40.122	Maylandia_zebra
ENSPPYG00000017998	ZC3HC1	96	57.520	ENSMGAG00000002977	ZC3HC1	97	58.130	Meleagris_gallopavo
ENSPPYG00000017998	ZC3HC1	82	74.519	ENSMAUG00000017032	Zc3hc1	91	75.062	Mesocricetus_auratus
ENSPPYG00000017998	ZC3HC1	99	85.487	ENSMICG00000009167	ZC3HC1	99	85.487	Microcebus_murinus
ENSPPYG00000017998	ZC3HC1	99	78.131	ENSMOCG00000015239	Zc3hc1	99	78.131	Microtus_ochrogaster
ENSPPYG00000017998	ZC3HC1	85	40.355	ENSMMOG00000002204	zc3hc1	98	39.690	Mola_mola
ENSPPYG00000017998	ZC3HC1	99	60.653	ENSMODG00000014630	ZC3HC1	99	60.653	Monodelphis_domestica
ENSPPYG00000017998	ZC3HC1	94	39.839	ENSMALG00000014447	zc3hc1	95	40.040	Monopterus_albus
ENSPPYG00000017998	ZC3HC1	99	77.600	MGP_CAROLIEiJ_G0028183	Zc3hc1	99	77.600	Mus_caroli
ENSPPYG00000017998	ZC3HC1	99	77.400	ENSMUSG00000039130	Zc3hc1	99	77.400	Mus_musculus
ENSPPYG00000017998	ZC3HC1	99	76.858	MGP_PahariEiJ_G0021941	Zc3hc1	99	76.858	Mus_pahari
ENSPPYG00000017998	ZC3HC1	99	77.400	MGP_SPRETEiJ_G0029183	Zc3hc1	99	77.400	Mus_spretus
ENSPPYG00000017998	ZC3HC1	95	82.328	ENSMPUG00000005297	ZC3HC1	95	82.328	Mustela_putorius_furo
ENSPPYG00000017998	ZC3HC1	99	81.621	ENSMLUG00000000063	-	99	81.621	Myotis_lucifugus
ENSPPYG00000017998	ZC3HC1	65	82.178	ENSMLUG00000029228	-	98	76.696	Myotis_lucifugus
ENSPPYG00000017998	ZC3HC1	99	79.762	ENSNGAG00000019014	Zc3hc1	99	79.762	Nannospalax_galili
ENSPPYG00000017998	ZC3HC1	94	41.020	ENSNBRG00000004577	zc3hc1	94	40.408	Neolamprologus_brichardi
ENSPPYG00000017998	ZC3HC1	100	88.492	ENSNLEG00000012698	ZC3HC1	100	88.492	Nomascus_leucogenys
ENSPPYG00000017998	ZC3HC1	98	73.737	ENSMEUG00000011023	ZC3HC1	98	73.737	Notamacropus_eugenii
ENSPPYG00000017998	ZC3HC1	65	68.116	ENSOPRG00000007867	-	67	68.077	Ochotona_princeps
ENSPPYG00000017998	ZC3HC1	99	76.342	ENSODEG00000014604	ZC3HC1	99	76.143	Octodon_degus
ENSPPYG00000017998	ZC3HC1	94	41.141	ENSONIG00000011644	zc3hc1	94	40.530	Oreochromis_niloticus
ENSPPYG00000017998	ZC3HC1	90	63.283	ENSOANG00000011460	ZC3HC1	99	63.499	Ornithorhynchus_anatinus
ENSPPYG00000017998	ZC3HC1	99	78.895	ENSOCUG00000017137	ZC3HC1	99	78.895	Oryctolagus_cuniculus
ENSPPYG00000017998	ZC3HC1	95	40.808	ENSORLG00000014409	zc3hc1	94	40.808	Oryzias_latipes
ENSPPYG00000017998	ZC3HC1	95	41.010	ENSORLG00020015874	zc3hc1	94	41.600	Oryzias_latipes_hni
ENSPPYG00000017998	ZC3HC1	95	40.606	ENSORLG00015014641	zc3hc1	94	40.606	Oryzias_latipes_hsok
ENSPPYG00000017998	ZC3HC1	95	42.300	ENSOMEG00000020604	zc3hc1	94	42.300	Oryzias_melastigma
ENSPPYG00000017998	ZC3HC1	95	42.300	ENSOMEG00000000215	zc3hc1	94	42.300	Oryzias_melastigma
ENSPPYG00000017998	ZC3HC1	99	81.474	ENSOGAG00000026193	ZC3HC1	99	81.474	Otolemur_garnettii
ENSPPYG00000017998	ZC3HC1	99	83.202	ENSOARG00000004907	ZC3HC1	98	83.202	Ovis_aries
ENSPPYG00000017998	ZC3HC1	100	90.079	ENSPPAG00000043172	ZC3HC1	99	95.122	Pan_paniscus
ENSPPYG00000017998	ZC3HC1	99	82.704	ENSPPRG00000001004	ZC3HC1	99	82.704	Panthera_pardus
ENSPPYG00000017998	ZC3HC1	99	83.300	ENSPTIG00000007823	ZC3HC1	99	83.300	Panthera_tigris_altaica
ENSPPYG00000017998	ZC3HC1	100	89.683	ENSPTRG00000019685	ZC3HC1	99	95.122	Pan_troglodytes
ENSPPYG00000017998	ZC3HC1	99	90.476	ENSPANG00000014229	ZC3HC1	98	94.608	Papio_anubis
ENSPPYG00000017998	ZC3HC1	95	43.802	ENSPKIG00000007172	zc3hc1	95	43.802	Paramormyrops_kingsleyae
ENSPPYG00000017998	ZC3HC1	93	56.904	ENSPSIG00000016646	ZC3HC1	99	54.864	Pelodiscus_sinensis
ENSPPYG00000017998	ZC3HC1	94	37.698	ENSPMGG00000003548	zc3hc1	95	37.575	Periophthalmus_magnuspinnatus
ENSPPYG00000017998	ZC3HC1	99	78.529	ENSPEMG00000000514	Zc3hc1	99	78.529	Peromyscus_maniculatus_bairdii
ENSPPYG00000017998	ZC3HC1	99	71.831	ENSPCIG00000020619	ZC3HC1	99	73.333	Phascolarctos_cinereus
ENSPPYG00000017998	ZC3HC1	94	39.600	ENSPFOG00000003466	zc3hc1	95	39.053	Poecilia_formosa
ENSPPYG00000017998	ZC3HC1	95	39.563	ENSPLAG00000022211	zc3hc1	95	38.477	Poecilia_latipinna
ENSPPYG00000017998	ZC3HC1	94	39.400	ENSPMEG00000001458	zc3hc1	95	38.856	Poecilia_mexicana
ENSPPYG00000017998	ZC3HC1	94	40.365	ENSPREG00000004004	zc3hc1	95	38.856	Poecilia_reticulata
ENSPPYG00000017998	ZC3HC1	91	77.440	ENSPCAG00000001182	ZC3HC1	99	77.440	Procavia_capensis
ENSPPYG00000017998	ZC3HC1	99	86.083	ENSPCOG00000017354	ZC3HC1	99	86.083	Propithecus_coquereli
ENSPPYG00000017998	ZC3HC1	99	77.336	ENSPVAG00000003195	ZC3HC1	99	77.137	Pteropus_vampyrus
ENSPPYG00000017998	ZC3HC1	94	40.733	ENSPNYG00000020692	zc3hc1	94	40.122	Pundamilia_nyererei
ENSPPYG00000017998	ZC3HC1	93	41.042	ENSPNAG00000020746	zc3hc1	95	41.250	Pygocentrus_nattereri
ENSPPYG00000017998	ZC3HC1	99	78.373	ENSRNOG00000010154	Zc3hc1	99	78.373	Rattus_norvegicus
ENSPPYG00000017998	ZC3HC1	90	88.546	ENSRBIG00000029409	ZC3HC1	99	95.735	Rhinopithecus_bieti
ENSPPYG00000017998	ZC3HC1	99	89.463	ENSRROG00000041831	ZC3HC1	98	93.627	Rhinopithecus_roxellana
ENSPPYG00000017998	ZC3HC1	99	89.301	ENSSBOG00000032787	ZC3HC1	99	92.787	Saimiri_boliviensis_boliviensis
ENSPPYG00000017998	ZC3HC1	92	71.888	ENSSHAG00000002529	ZC3HC1	99	71.888	Sarcophilus_harrisii
ENSPPYG00000017998	ZC3HC1	98	42.607	ENSSFOG00015003667	zc3hc1	97	41.313	Scleropages_formosus
ENSPPYG00000017998	ZC3HC1	94	41.365	ENSSMAG00000000647	zc3hc1	85	41.365	Scophthalmus_maximus
ENSPPYG00000017998	ZC3HC1	95	41.988	ENSSDUG00000004241	zc3hc1	93	41.212	Seriola_dumerili
ENSPPYG00000017998	ZC3HC1	95	41.988	ENSSLDG00000025056	zc3hc1	93	41.414	Seriola_lalandi_dorsalis
ENSPPYG00000017998	ZC3HC1	99	72.000	ENSSARG00000012013	ZC3HC1	99	72.000	Sorex_araneus
ENSPPYG00000017998	ZC3HC1	86	51.147	ENSSPUG00000000778	ZC3HC1	86	51.147	Sphenodon_punctatus
ENSPPYG00000017998	ZC3HC1	94	42.857	ENSSPAG00000020041	zc3hc1	95	42.052	Stegastes_partitus
ENSPPYG00000017998	ZC3HC1	99	81.909	ENSSSCG00000016565	ZC3HC1	99	82.051	Sus_scrofa
ENSPPYG00000017998	ZC3HC1	53	57.959	ENSTGUG00000016262	ZC3HC1	99	57.959	Taeniopygia_guttata
ENSPPYG00000017998	ZC3HC1	94	40.825	ENSTRUG00000020077	zc3hc1	94	40.206	Takifugu_rubripes
ENSPPYG00000017998	ZC3HC1	95	41.513	ENSTNIG00000007585	zc3hc1	100	41.548	Tetraodon_nigroviridis
ENSPPYG00000017998	ZC3HC1	90	90.698	ENSTBEG00000005216	ZC3HC1	99	76.143	Tupaia_belangeri
ENSPPYG00000017998	ZC3HC1	95	82.536	ENSTTRG00000008458	ZC3HC1	99	82.536	Tursiops_truncatus
ENSPPYG00000017998	ZC3HC1	99	83.897	ENSUAMG00000020249	ZC3HC1	99	83.897	Ursus_americanus
ENSPPYG00000017998	ZC3HC1	99	83.300	ENSUMAG00000009268	ZC3HC1	99	83.300	Ursus_maritimus
ENSPPYG00000017998	ZC3HC1	77	91.667	ENSVPAG00000010846	ZC3HC1	77	91.667	Vicugna_pacos
ENSPPYG00000017998	ZC3HC1	96	84.232	ENSVVUG00000012386	ZC3HC1	99	84.232	Vulpes_vulpes
ENSPPYG00000017998	ZC3HC1	91	47.650	ENSXETG00000033900	zc3hc1	95	47.650	Xenopus_tropicalis
ENSPPYG00000017998	ZC3HC1	95	40.854	ENSXCOG00000013570	zc3hc1	95	40.283	Xiphophorus_couchianus
ENSPPYG00000017998	ZC3HC1	87	41.667	ENSXMAG00000010979	zc3hc1	94	41.048	Xiphophorus_maculatus