EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000018777 (Gene tree)
Gene ID: 100448330
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 42479 bases
Position: chr8:104492454-104534932
Accession: 100448330
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000021061	POP1	PF06978.11	9.3e-39	1	2
ENSPPYP00000021061	POP1	PF06978.11	9.3e-39	2	2
ENSPPYP00000021061	POPLD	PF08170.12	6.8e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000021904	POP1-201	4700	XM_002819313	ENSPPYP00000021061	1024 (aa)	XP_002819359	H2PQW4

Gene Model

Click here to download ENSPPYG00000018777's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03008	Ribosome biogenesis in eukaryotes	KEGG
pon03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000018777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000018777	POP1	100	97.754	ENSG00000104356	POP1	100	99.454	Homo_sapiens
ENSPPYG00000018777	POP1	100	48.064	ENSAPOG00000008198	pop1	100	47.970	Acanthochromis_polyacanthus
ENSPPYG00000018777	POP1	100	80.583	ENSAMEG00000000556	POP1	100	80.583	Ailuropoda_melanoleuca
ENSPPYG00000018777	POP1	90	49.470	ENSACIG00000004169	POP1	93	49.258	Amphilophus_citrinellus
ENSPPYG00000018777	POP1	100	46.943	ENSAOCG00000010991	pop1	100	46.943	Amphiprion_ocellaris
ENSPPYG00000018777	POP1	91	47.119	ENSAPEG00000007607	pop1	96	47.531	Amphiprion_percula
ENSPPYG00000018777	POP1	100	45.896	ENSATEG00000024814	POP1	100	46.284	Anabas_testudineus
ENSPPYG00000018777	POP1	92	62.786	ENSAPLG00000014418	POP1	100	62.786	Anas_platyrhynchos
ENSPPYG00000018777	POP1	100	56.455	ENSACAG00000016083	POP1	100	56.244	Anolis_carolinensis
ENSPPYG00000018777	POP1	89	94.362	ENSANAG00000026360	POP1	100	94.362	Aotus_nancymaae
ENSPPYG00000018777	POP1	93	53.605	ENSACLG00000010951	pop1	100	47.736	Astatotilapia_calliptera
ENSPPYG00000018777	POP1	100	45.830	ENSAMXG00000014483	POP1	100	45.413	Astyanax_mexicanus
ENSPPYG00000018777	POP1	100	80.762	ENSBTAG00000012596	POP1	100	80.762	Bos_taurus
ENSPPYG00000018777	POP1	100	93.066	ENSCJAG00000015567	POP1	100	93.066	Callithrix_jacchus
ENSPPYG00000018777	POP1	100	80.957	ENSCAFG00000000469	POP1	100	80.957	Canis_familiaris
ENSPPYG00000018777	POP1	100	82.129	ENSCAFG00020026765	POP1	100	82.129	Canis_lupus_dingo
ENSPPYG00000018777	POP1	100	80.976	ENSCHIG00000017066	POP1	100	80.976	Capra_hircus
ENSPPYG00000018777	POP1	100	86.426	ENSTSYG00000003097	POP1	100	86.426	Carlito_syrichta
ENSPPYG00000018777	POP1	100	78.231	ENSCAPG00000007251	POP1	100	78.231	Cavia_aperea
ENSPPYG00000018777	POP1	100	81.250	ENSCPOG00000002901	POP1	100	81.250	Cavia_porcellus
ENSPPYG00000018777	POP1	100	92.969	ENSCCAG00000018939	POP1	100	92.969	Cebus_capucinus
ENSPPYG00000018777	POP1	100	96.289	ENSCATG00000040916	POP1	100	96.289	Cercocebus_atys
ENSPPYG00000018777	POP1	100	82.129	ENSCLAG00000007208	POP1	97	82.129	Chinchilla_lanigera
ENSPPYG00000018777	POP1	90	95.553	ENSCSAG00000012340	POP1	99	95.553	Chlorocebus_sabaeus
ENSPPYG00000018777	POP1	95	79.611	ENSCHOG00000011432	POP1	100	79.611	Choloepus_hoffmanni
ENSPPYG00000018777	POP1	100	65.272	ENSCPBG00000006373	POP1	100	65.272	Chrysemys_picta_bellii
ENSPPYG00000018777	POP1	82	38.132	ENSCING00000008323	-	88	38.132	Ciona_intestinalis
ENSPPYG00000018777	POP1	100	96.191	ENSCANG00000001647	POP1	100	96.191	Colobus_angolensis_palliatus
ENSPPYG00000018777	POP1	100	76.585	ENSCGRG00001017308	Pop1	100	76.585	Cricetulus_griseus_chok1gshd
ENSPPYG00000018777	POP1	100	71.024	ENSCGRG00000010824	Pop1	100	71.024	Cricetulus_griseus_crigri
ENSPPYG00000018777	POP1	100	45.584	ENSCSEG00000008737	POP1	100	45.869	Cynoglossus_semilaevis
ENSPPYG00000018777	POP1	100	47.293	ENSCVAG00000022248	pop1	100	47.293	Cyprinodon_variegatus
ENSPPYG00000018777	POP1	100	78.040	ENSDNOG00000019974	POP1	100	78.040	Dasypus_novemcinctus
ENSPPYG00000018777	POP1	100	72.585	ENSDORG00000015384	Pop1	100	72.000	Dipodomys_ordii
ENSPPYG00000018777	POP1	61	32.862	FBgn0026702	l(1)G0045	78	30.656	Drosophila_melanogaster
ENSPPYG00000018777	POP1	89	70.877	ENSETEG00000007839	POP1	88	70.877	Echinops_telfairi
ENSPPYG00000018777	POP1	100	83.691	ENSEASG00005003189	POP1	98	83.691	Equus_asinus_asinus
ENSPPYG00000018777	POP1	100	83.594	ENSECAG00000024236	POP1	100	83.594	Equus_caballus
ENSPPYG00000018777	POP1	67	75.000	ENSEEUG00000003050	-	70	75.000	Erinaceus_europaeus
ENSPPYG00000018777	POP1	100	47.773	ENSELUG00000003526	pop1	100	47.493	Esox_lucius
ENSPPYG00000018777	POP1	100	83.984	ENSFCAG00000002168	POP1	100	83.984	Felis_catus
ENSPPYG00000018777	POP1	100	60.386	ENSFALG00000005711	POP1	100	60.521	Ficedula_albicollis
ENSPPYG00000018777	POP1	100	82.812	ENSFDAG00000017068	POP1	100	82.812	Fukomys_damarensis
ENSPPYG00000018777	POP1	100	47.092	ENSFHEG00000019518	pop1	100	47.433	Fundulus_heteroclitus
ENSPPYG00000018777	POP1	93	45.685	ENSGMOG00000000659	POP1	98	45.685	Gadus_morhua
ENSPPYG00000018777	POP1	100	47.546	ENSGAFG00000019770	POP1	100	47.257	Gambusia_affinis
ENSPPYG00000018777	POP1	100	46.660	ENSGACG00000003499	pop1	100	46.660	Gasterosteus_aculeatus
ENSPPYG00000018777	POP1	100	64.050	ENSGAGG00000011737	POP1	98	64.244	Gopherus_agassizii
ENSPPYG00000018777	POP1	100	97.656	ENSGGOG00000003176	POP1	100	97.656	Gorilla_gorilla
ENSPPYG00000018777	POP1	100	47.413	ENSHBUG00000021583	pop1	100	47.358	Haplochromis_burtoni
ENSPPYG00000018777	POP1	100	82.031	ENSHGLG00000006029	POP1	100	82.031	Heterocephalus_glaber_female
ENSPPYG00000018777	POP1	100	82.031	ENSHGLG00100016879	POP1	100	82.031	Heterocephalus_glaber_male
ENSPPYG00000018777	POP1	90	49.359	ENSHCOG00000013888	pop1	96	49.359	Hippocampus_comes
ENSPPYG00000018777	POP1	100	44.918	ENSIPUG00000018336	pop1	91	62.651	Ictalurus_punctatus
ENSPPYG00000018777	POP1	100	83.203	ENSSTOG00000011455	POP1	97	83.203	Ictidomys_tridecemlineatus
ENSPPYG00000018777	POP1	100	78.223	ENSJJAG00000013325	Pop1	100	78.223	Jaculus_jaculus
ENSPPYG00000018777	POP1	100	46.800	ENSKMAG00000001346	POP1	100	46.800	Kryptolebias_marmoratus
ENSPPYG00000018777	POP1	89	48.164	ENSLBEG00000024457	POP1	95	47.463	Labrus_bergylta
ENSPPYG00000018777	POP1	93	56.048	ENSLACG00000012498	POP1	99	55.912	Latimeria_chalumnae
ENSPPYG00000018777	POP1	100	51.388	ENSLOCG00000009817	POP1	100	51.582	Lepisosteus_oculatus
ENSPPYG00000018777	POP1	100	83.268	ENSLAFG00000010770	POP1	100	83.268	Loxodonta_africana
ENSPPYG00000018777	POP1	100	95.996	ENSMFAG00000000347	POP1	100	95.996	Macaca_fascicularis
ENSPPYG00000018777	POP1	100	95.508	ENSMNEG00000036870	POP1	100	95.508	Macaca_nemestrina
ENSPPYG00000018777	POP1	100	95.898	ENSMLEG00000034986	POP1	100	95.898	Mandrillus_leucophaeus
ENSPPYG00000018777	POP1	100	46.937	ENSMAMG00000004040	pop1	100	46.937	Mastacembelus_armatus
ENSPPYG00000018777	POP1	100	47.601	ENSMZEG00005025448	pop1	100	47.736	Maylandia_zebra
ENSPPYG00000018777	POP1	100	58.025	ENSMGAG00000012167	POP1	100	58.657	Meleagris_gallopavo
ENSPPYG00000018777	POP1	100	76.511	ENSMAUG00000017537	Pop1	100	76.511	Mesocricetus_auratus
ENSPPYG00000018777	POP1	100	87.402	ENSMICG00000004361	POP1	100	87.402	Microcebus_murinus
ENSPPYG00000018777	POP1	100	75.000	ENSMOCG00000006356	Pop1	100	75.879	Microtus_ochrogaster
ENSPPYG00000018777	POP1	100	44.272	ENSMMOG00000018242	pop1	100	44.272	Mola_mola
ENSPPYG00000018777	POP1	100	69.981	ENSMODG00000006561	POP1	100	69.788	Monodelphis_domestica
ENSPPYG00000018777	POP1	100	47.538	ENSMALG00000012621	POP1	100	47.164	Monopterus_albus
ENSPPYG00000018777	POP1	100	76.074	MGP_CAROLIEiJ_G0019726	Pop1	100	76.074	Mus_caroli
ENSPPYG00000018777	POP1	100	76.660	ENSMUSG00000022325	Pop1	100	76.660	Mus_musculus
ENSPPYG00000018777	POP1	100	76.465	MGP_PahariEiJ_G0019735	Pop1	100	76.465	Mus_pahari
ENSPPYG00000018777	POP1	100	76.074	MGP_SPRETEiJ_G0020622	Pop1	100	76.074	Mus_spretus
ENSPPYG00000018777	POP1	100	82.004	ENSMPUG00000015250	POP1	100	81.128	Mustela_putorius_furo
ENSPPYG00000018777	POP1	100	77.290	ENSMLUG00000010204	POP1	100	77.388	Myotis_lucifugus
ENSPPYG00000018777	POP1	100	82.031	ENSNGAG00000001582	Pop1	100	82.031	Nannospalax_galili
ENSPPYG00000018777	POP1	89	48.077	ENSNBRG00000002356	pop1	94	48.199	Neolamprologus_brichardi
ENSPPYG00000018777	POP1	100	97.266	ENSNLEG00000002541	POP1	100	97.266	Nomascus_leucogenys
ENSPPYG00000018777	POP1	93	61.065	ENSMEUG00000003118	POP1	98	61.065	Notamacropus_eugenii
ENSPPYG00000018777	POP1	100	79.199	ENSOPRG00000007667	POP1	100	79.102	Ochotona_princeps
ENSPPYG00000018777	POP1	100	80.214	ENSODEG00000003984	POP1	100	80.214	Octodon_degus
ENSPPYG00000018777	POP1	100	48.008	ENSONIG00000016445	pop1	100	47.859	Oreochromis_niloticus
ENSPPYG00000018777	POP1	59	70.122	ENSOANG00000001278	-	94	70.732	Ornithorhynchus_anatinus
ENSPPYG00000018777	POP1	100	81.730	ENSOCUG00000017400	POP1	100	81.730	Oryctolagus_cuniculus
ENSPPYG00000018777	POP1	100	47.076	ENSORLG00000002839	pop1	100	47.368	Oryzias_latipes
ENSPPYG00000018777	POP1	90	49.680	ENSORLG00020022450	POP1	96	49.522	Oryzias_latipes_hni
ENSPPYG00000018777	POP1	100	47.601	ENSORLG00015012746	POP1	100	47.943	Oryzias_latipes_hsok
ENSPPYG00000018777	POP1	100	47.969	ENSOMEG00000006915	pop1	99	47.440	Oryzias_melastigma
ENSPPYG00000018777	POP1	100	84.668	ENSOGAG00000001466	POP1	100	84.668	Otolemur_garnettii
ENSPPYG00000018777	POP1	100	97.852	ENSPPAG00000018410	POP1	100	97.852	Pan_paniscus
ENSPPYG00000018777	POP1	100	83.902	ENSPPRG00000005002	POP1	100	83.902	Panthera_pardus
ENSPPYG00000018777	POP1	100	84.293	ENSPTIG00000016527	POP1	100	84.293	Panthera_tigris_altaica
ENSPPYG00000018777	POP1	100	97.852	ENSPTRG00000020458	POP1	100	97.852	Pan_troglodytes
ENSPPYG00000018777	POP1	100	95.605	ENSPANG00000009704	POP1	100	95.605	Papio_anubis
ENSPPYG00000018777	POP1	100	49.234	ENSPKIG00000016325	POP1	100	49.234	Paramormyrops_kingsleyae
ENSPPYG00000018777	POP1	100	63.143	ENSPSIG00000012343	POP1	100	63.143	Pelodiscus_sinensis
ENSPPYG00000018777	POP1	90	49.679	ENSPMGG00000022253	POP1	95	49.679	Periophthalmus_magnuspinnatus
ENSPPYG00000018777	POP1	99	75.215	ENSPEMG00000023633	Pop1	100	75.215	Peromyscus_maniculatus_bairdii
ENSPPYG00000018777	POP1	90	44.245	ENSPMAG00000003209	POP1	100	44.198	Petromyzon_marinus
ENSPPYG00000018777	POP1	100	68.365	ENSPCIG00000012216	POP1	100	68.365	Phascolarctos_cinereus
ENSPPYG00000018777	POP1	100	48.464	ENSPFOG00000012490	POP1	100	48.369	Poecilia_formosa
ENSPPYG00000018777	POP1	100	48.319	ENSPLAG00000004646	POP1	100	48.223	Poecilia_latipinna
ENSPPYG00000018777	POP1	100	48.851	ENSPMEG00000019592	POP1	100	48.755	Poecilia_mexicana
ENSPPYG00000018777	POP1	100	48.560	ENSPREG00000020951	POP1	100	48.464	Poecilia_reticulata
ENSPPYG00000018777	POP1	100	75.902	ENSPCAG00000016662	POP1	100	75.024	Procavia_capensis
ENSPPYG00000018777	POP1	100	87.695	ENSPCOG00000019420	POP1	100	87.695	Propithecus_coquereli
ENSPPYG00000018777	POP1	100	82.146	ENSPVAG00000014468	POP1	100	82.146	Pteropus_vampyrus
ENSPPYG00000018777	POP1	89	48.443	ENSPNYG00000004476	pop1	99	47.571	Pundamilia_nyererei
ENSPPYG00000018777	POP1	100	45.396	ENSPNAG00000000265	pop1	100	43.646	Pygocentrus_nattereri
ENSPPYG00000018777	POP1	100	77.441	ENSRNOG00000005243	Pop1	100	77.441	Rattus_norvegicus
ENSPPYG00000018777	POP1	100	96.094	ENSRBIG00000007996	POP1	100	96.094	Rhinopithecus_bieti
ENSPPYG00000018777	POP1	100	96.289	ENSRROG00000012334	POP1	100	96.289	Rhinopithecus_roxellana
ENSPPYG00000018777	POP1	99	93.972	ENSSBOG00000020830	POP1	100	93.972	Saimiri_boliviensis_boliviensis
ENSPPYG00000018777	POP1	100	69.022	ENSSHAG00000000296	POP1	100	69.022	Sarcophilus_harrisii
ENSPPYG00000018777	POP1	100	47.947	ENSSFOG00015007429	pop1	99	47.851	Scleropages_formosus
ENSPPYG00000018777	POP1	87	53.433	ENSSMAG00000010467	POP1	99	48.328	Scophthalmus_maximus
ENSPPYG00000018777	POP1	100	46.466	ENSSDUG00000007817	POP1	100	46.754	Seriola_dumerili
ENSPPYG00000018777	POP1	100	46.887	ENSSLDG00000012565	POP1	100	47.269	Seriola_lalandi_dorsalis
ENSPPYG00000018777	POP1	100	59.126	ENSSPUG00000003550	-	100	59.496	Sphenodon_punctatus
ENSPPYG00000018777	POP1	90	49.839	ENSSPAG00000014955	pop1	94	49.839	Stegastes_partitus
ENSPPYG00000018777	POP1	100	81.543	ENSSSCG00000006078	POP1	100	81.543	Sus_scrofa
ENSPPYG00000018777	POP1	92	57.354	ENSTGUG00000012011	-	100	57.354	Taeniopygia_guttata
ENSPPYG00000018777	POP1	91	48.520	ENSTRUG00000010856	pop1	94	48.520	Takifugu_rubripes
ENSPPYG00000018777	POP1	92	49.018	ENSTNIG00000013297	pop1	99	48.914	Tetraodon_nigroviridis
ENSPPYG00000018777	POP1	95	80.757	ENSTBEG00000014214	POP1	100	80.757	Tupaia_belangeri
ENSPPYG00000018777	POP1	100	80.176	ENSTTRG00000016071	POP1	100	80.176	Tursiops_truncatus
ENSPPYG00000018777	POP1	99	78.184	ENSUAMG00000017309	POP1	100	78.282	Ursus_americanus
ENSPPYG00000018777	POP1	92	90.688	ENSUMAG00000016952	POP1	100	90.688	Ursus_maritimus
ENSPPYG00000018777	POP1	82	88.686	ENSVPAG00000008278	POP1	82	88.686	Vicugna_pacos
ENSPPYG00000018777	POP1	100	82.227	ENSVVUG00000010994	POP1	100	82.227	Vulpes_vulpes
ENSPPYG00000018777	POP1	100	42.992	ENSXCOG00000017043	POP1	100	43.075	Xiphophorus_couchianus
ENSPPYG00000018777	POP1	100	47.454	ENSXMAG00000002472	POP1	100	47.358	Xiphophorus_maculatus