EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000018973 (Gene tree)
Gene ID: -
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 15887 bases
Position: chr8:152753476-152769362
Accession: 2324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000021278	CPSF_A	PF03178.15	6.8e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000022126	CPSF1-201	4101	-	ENSPPYP00000021278	1337 (aa)	-	H2PRG8

Gene Model

Click here to download ENSPPYG00000018973's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000018973's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000018973	CPSF1	100	91.199	ENSG00000071894	CPSF1	100	91.199	Homo_sapiens
ENSPPYG00000018973	CPSF1	100	71.033	ENSAPOG00000019621	cpsf1	100	71.101	Acanthochromis_polyacanthus
ENSPPYG00000018973	CPSF1	97	86.633	ENSAMEG00000005557	CPSF1	100	86.633	Ailuropoda_melanoleuca
ENSPPYG00000018973	CPSF1	100	71.419	ENSACIG00000006112	cpsf1	100	71.836	Amphilophus_citrinellus
ENSPPYG00000018973	CPSF1	100	72.245	ENSAOCG00000007120	cpsf1	100	72.383	Amphiprion_ocellaris
ENSPPYG00000018973	CPSF1	100	72.590	ENSAPEG00000005755	cpsf1	100	72.658	Amphiprion_percula
ENSPPYG00000018973	CPSF1	100	70.755	ENSATEG00000011097	cpsf1	100	71.159	Anabas_testudineus
ENSPPYG00000018973	CPSF1	93	76.854	ENSACAG00000009655	CPSF1	99	76.929	Anolis_carolinensis
ENSPPYG00000018973	CPSF1	100	90.846	ENSANAG00000036514	CPSF1	100	90.846	Aotus_nancymaae
ENSPPYG00000018973	CPSF1	100	70.194	ENSACLG00000012231	cpsf1	99	71.941	Astatotilapia_calliptera
ENSPPYG00000018973	CPSF1	100	67.035	ENSAMXG00000008485	cpsf1	100	67.104	Astyanax_mexicanus
ENSPPYG00000018973	CPSF1	100	86.667	ENSBTAG00000008355	CPSF1	100	86.667	Bos_taurus
ENSPPYG00000018973	CPSF1	100	90.777	ENSCJAG00000021421	CPSF1	100	90.777	Callithrix_jacchus
ENSPPYG00000018973	CPSF1	97	87.848	ENSCAFG00000001600	CPSF1	100	92.419	Canis_familiaris
ENSPPYG00000018973	CPSF1	100	88.374	ENSCAFG00020020821	CPSF1	100	88.374	Canis_lupus_dingo
ENSPPYG00000018973	CPSF1	100	83.776	ENSCHIG00000015833	CPSF1	100	83.776	Capra_hircus
ENSPPYG00000018973	CPSF1	100	89.875	ENSTSYG00000028560	CPSF1	93	100.000	Carlito_syrichta
ENSPPYG00000018973	CPSF1	96	86.953	ENSCAPG00000014921	CPSF1	99	86.953	Cavia_aperea
ENSPPYG00000018973	CPSF1	100	86.902	ENSCPOG00000011448	CPSF1	100	86.902	Cavia_porcellus
ENSPPYG00000018973	CPSF1	100	90.915	ENSCCAG00000037658	CPSF1	100	90.915	Cebus_capucinus
ENSPPYG00000018973	CPSF1	100	90.915	ENSCATG00000037234	CPSF1	93	99.636	Cercocebus_atys
ENSPPYG00000018973	CPSF1	100	88.488	ENSCLAG00000012166	CPSF1	100	88.488	Chinchilla_lanigera
ENSPPYG00000018973	CPSF1	100	90.985	ENSCSAG00000008502	CPSF1	100	90.985	Chlorocebus_sabaeus
ENSPPYG00000018973	CPSF1	99	79.916	ENSCPBG00000018910	CPSF1	96	79.916	Chrysemys_picta_bellii
ENSPPYG00000018973	CPSF1	95	43.544	ENSCING00000000514	-	100	43.472	Ciona_intestinalis
ENSPPYG00000018973	CPSF1	99	42.887	ENSCSAVG00000002293	-	98	47.887	Ciona_savignyi
ENSPPYG00000018973	CPSF1	99	85.164	ENSCANG00000032760	CPSF1	100	87.500	Colobus_angolensis_palliatus
ENSPPYG00000018973	CPSF1	100	88.488	ENSCGRG00001016344	Cpsf1	100	88.488	Cricetulus_griseus_chok1gshd
ENSPPYG00000018973	CPSF1	100	86.408	ENSCGRG00000003118	Cpsf1	100	86.408	Cricetulus_griseus_crigri
ENSPPYG00000018973	CPSF1	100	70.519	ENSCSEG00000013464	cpsf1	100	70.242	Cynoglossus_semilaevis
ENSPPYG00000018973	CPSF1	91	69.702	ENSCVAG00000014059	cpsf1	100	73.148	Cyprinodon_variegatus
ENSPPYG00000018973	CPSF1	100	72.796	ENSDARG00000034178	cpsf1	100	72.865	Danio_rerio
ENSPPYG00000018973	CPSF1	58	93.380	ENSDNOG00000043654	CPSF1	94	84.638	Dasypus_novemcinctus
ENSPPYG00000018973	CPSF1	96	87.599	ENSDORG00000006278	Cpsf1	99	87.599	Dipodomys_ordii
ENSPPYG00000018973	CPSF1	100	41.116	FBgn0024698	Cpsf160	100	41.006	Drosophila_melanogaster
ENSPPYG00000018973	CPSF1	80	93.960	ENSETEG00000006022	CPSF1	82	93.960	Echinops_telfairi
ENSPPYG00000018973	CPSF1	100	88.927	ENSEASG00005010774	CPSF1	100	88.927	Equus_asinus_asinus
ENSPPYG00000018973	CPSF1	100	88.927	ENSECAG00000022209	CPSF1	100	88.927	Equus_caballus
ENSPPYG00000018973	CPSF1	100	86.644	ENSEEUG00000000471	CPSF1	100	86.644	Erinaceus_europaeus
ENSPPYG00000018973	CPSF1	100	71.096	ENSELUG00000012271	cpsf1	100	71.233	Esox_lucius
ENSPPYG00000018973	CPSF1	100	88.558	ENSFDAG00000016060	CPSF1	100	88.558	Fukomys_damarensis
ENSPPYG00000018973	CPSF1	100	69.649	ENSFHEG00000016801	cpsf1	100	69.855	Fundulus_heteroclitus
ENSPPYG00000018973	CPSF1	100	71.094	ENSGMOG00000000796	cpsf1	100	71.261	Gadus_morhua
ENSPPYG00000018973	CPSF1	96	85.714	ENSGAFG00000018890	cpsf1	100	85.714	Gambusia_affinis
ENSPPYG00000018973	CPSF1	100	71.605	ENSGACG00000008703	cpsf1	100	71.753	Gasterosteus_aculeatus
ENSPPYG00000018973	CPSF1	100	77.598	ENSGAGG00000004276	CPSF1	100	77.037	Gopherus_agassizii
ENSPPYG00000018973	CPSF1	100	91.262	ENSGGOG00000016185	CPSF1	100	91.262	Gorilla_gorilla
ENSPPYG00000018973	CPSF1	100	72.476	ENSHBUG00000018900	cpsf1	100	72.752	Haplochromis_burtoni
ENSPPYG00000018973	CPSF1	100	88.488	ENSHGLG00000016139	CPSF1	100	88.488	Heterocephalus_glaber_female
ENSPPYG00000018973	CPSF1	100	88.419	ENSHGLG00100009750	CPSF1	100	88.419	Heterocephalus_glaber_male
ENSPPYG00000018973	CPSF1	100	70.102	ENSHCOG00000018509	cpsf1	100	69.810	Hippocampus_comes
ENSPPYG00000018973	CPSF1	100	69.966	ENSIPUG00000011259	cpsf1	100	69.691	Ictalurus_punctatus
ENSPPYG00000018973	CPSF1	96	88.000	ENSSTOG00000009957	CPSF1	99	88.071	Ictidomys_tridecemlineatus
ENSPPYG00000018973	CPSF1	100	88.280	ENSJJAG00000023002	Cpsf1	100	88.280	Jaculus_jaculus
ENSPPYG00000018973	CPSF1	93	84.013	ENSKMAG00000001940	cpsf1	99	84.013	Kryptolebias_marmoratus
ENSPPYG00000018973	CPSF1	100	70.365	ENSLBEG00000003601	cpsf1	100	70.568	Labrus_bergylta
ENSPPYG00000018973	CPSF1	87	76.202	ENSLACG00000000233	CPSF1	89	76.202	Latimeria_chalumnae
ENSPPYG00000018973	CPSF1	97	82.182	ENSLOCG00000008484	cpsf1	93	82.182	Lepisosteus_oculatus
ENSPPYG00000018973	CPSF1	96	87.268	ENSLAFG00000022601	CPSF1	100	86.910	Loxodonta_africana
ENSPPYG00000018973	CPSF1	100	90.985	ENSMFAG00000037013	CPSF1	93	99.636	Macaca_fascicularis
ENSPPYG00000018973	CPSF1	100	90.985	ENSMMUG00000007380	CPSF1	94	99.636	Macaca_mulatta
ENSPPYG00000018973	CPSF1	96	90.818	ENSMNEG00000043564	CPSF1	100	90.818	Macaca_nemestrina
ENSPPYG00000018973	CPSF1	100	90.915	ENSMLEG00000043010	CPSF1	94	99.273	Mandrillus_leucophaeus
ENSPPYG00000018973	CPSF1	100	71.236	ENSMAMG00000003803	cpsf1	100	71.438	Mastacembelus_armatus
ENSPPYG00000018973	CPSF1	100	70.332	ENSMZEG00005001168	cpsf1	100	70.609	Maylandia_zebra
ENSPPYG00000018973	CPSF1	100	88.280	ENSMAUG00000003601	Cpsf1	100	88.280	Mesocricetus_auratus
ENSPPYG00000018973	CPSF1	100	89.390	ENSMICG00000015767	CPSF1	100	89.390	Microcebus_murinus
ENSPPYG00000018973	CPSF1	100	88.558	ENSMOCG00000022758	Cpsf1	100	88.558	Microtus_ochrogaster
ENSPPYG00000018973	CPSF1	100	71.804	ENSMMOG00000021245	cpsf1	100	72.218	Mola_mola
ENSPPYG00000018973	CPSF1	100	85.517	ENSMODG00000010755	CPSF1	100	85.517	Monodelphis_domestica
ENSPPYG00000018973	CPSF1	100	70.636	ENSMALG00000020545	cpsf1	100	70.907	Monopterus_albus
ENSPPYG00000018973	CPSF1	100	88.696	MGP_CAROLIEiJ_G0019936	Cpsf1	100	88.696	Mus_caroli
ENSPPYG00000018973	CPSF1	100	88.627	ENSMUSG00000034022	Cpsf1	100	88.627	Mus_musculus
ENSPPYG00000018973	CPSF1	100	88.558	MGP_PahariEiJ_G0019946	Cpsf1	100	88.558	Mus_pahari
ENSPPYG00000018973	CPSF1	100	88.627	MGP_SPRETEiJ_G0020839	Cpsf1	100	88.627	Mus_spretus
ENSPPYG00000018973	CPSF1	93	87.111	ENSMPUG00000006419	CPSF1	93	87.111	Mustela_putorius_furo
ENSPPYG00000018973	CPSF1	100	88.350	ENSNGAG00000022460	Cpsf1	100	88.350	Nannospalax_galili
ENSPPYG00000018973	CPSF1	100	67.865	ENSNBRG00000000813	cpsf1	100	67.865	Neolamprologus_brichardi
ENSPPYG00000018973	CPSF1	86	80.645	ENSNLEG00000010633	-	100	87.037	Nomascus_leucogenys
ENSPPYG00000018973	CPSF1	81	93.605	ENSMEUG00000014922	CPSF1	85	93.605	Notamacropus_eugenii
ENSPPYG00000018973	CPSF1	59	94.798	ENSOPRG00000004693	-	69	94.798	Ochotona_princeps
ENSPPYG00000018973	CPSF1	100	88.627	ENSODEG00000013995	CPSF1	100	88.627	Octodon_degus
ENSPPYG00000018973	CPSF1	100	72.614	ENSONIG00000007676	cpsf1	100	73.029	Oreochromis_niloticus
ENSPPYG00000018973	CPSF1	58	92.143	ENSOANG00000010716	CPSF1	88	92.143	Ornithorhynchus_anatinus
ENSPPYG00000018973	CPSF1	100	70.401	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSPPYG00000018973	CPSF1	100	70.536	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSPPYG00000018973	CPSF1	100	70.380	ENSORLG00015009979	cpsf1	100	70.584	Oryzias_latipes_hsok
ENSPPYG00000018973	CPSF1	100	70.333	ENSOMEG00000011849	cpsf1	100	70.952	Oryzias_melastigma
ENSPPYG00000018973	CPSF1	100	89.459	ENSOGAG00000000315	CPSF1	100	89.459	Otolemur_garnettii
ENSPPYG00000018973	CPSF1	100	91.401	ENSPPAG00000019280	CPSF1	100	91.401	Pan_paniscus
ENSPPYG00000018973	CPSF1	100	89.843	ENSPTRG00000051253	-	100	89.843	Pan_troglodytes
ENSPPYG00000018973	CPSF1	100	91.401	ENSPTRG00000049288	-	100	91.401	Pan_troglodytes
ENSPPYG00000018973	CPSF1	96	90.746	ENSPANG00000015005	CPSF1	100	90.387	Papio_anubis
ENSPPYG00000018973	CPSF1	100	73.513	ENSPKIG00000002582	cpsf1	100	73.430	Paramormyrops_kingsleyae
ENSPPYG00000018973	CPSF1	100	85.448	ENSPCIG00000009035	CPSF1	100	85.448	Phascolarctos_cinereus
ENSPPYG00000018973	CPSF1	100	69.371	ENSPFOG00000012870	cpsf1	100	69.709	Poecilia_formosa
ENSPPYG00000018973	CPSF1	100	69.257	ENSPREG00000016307	cpsf1	100	69.527	Poecilia_reticulata
ENSPPYG00000018973	CPSF1	92	93.466	ENSPCAG00000011541	CPSF1	93	93.466	Procavia_capensis
ENSPPYG00000018973	CPSF1	100	86.300	ENSPCOG00000020001	CPSF1	100	86.300	Propithecus_coquereli
ENSPPYG00000018973	CPSF1	93	97.143	ENSPVAG00000006761	CPSF1	91	97.143	Pteropus_vampyrus
ENSPPYG00000018973	CPSF1	100	71.536	ENSPNYG00000004906	cpsf1	100	71.809	Pundamilia_nyererei
ENSPPYG00000018973	CPSF1	100	69.178	ENSPNAG00000024395	cpsf1	100	68.763	Pygocentrus_nattereri
ENSPPYG00000018973	CPSF1	100	88.627	ENSRNOG00000030705	Cpsf1	100	88.627	Rattus_norvegicus
ENSPPYG00000018973	CPSF1	100	90.915	ENSRBIG00000044907	CPSF1	93	99.636	Rhinopithecus_bieti
ENSPPYG00000018973	CPSF1	100	90.846	ENSRROG00000044861	CPSF1	93	99.636	Rhinopithecus_roxellana
ENSPPYG00000018973	CPSF1	96	90.459	ENSSBOG00000027177	CPSF1	100	90.459	Saimiri_boliviensis_boliviensis
ENSPPYG00000018973	CPSF1	100	85.172	ENSSHAG00000006500	CPSF1	100	85.172	Sarcophilus_harrisii
ENSPPYG00000018973	CPSF1	100	70.937	ENSSFOG00015004606	cpsf1	100	73.527	Scleropages_formosus
ENSPPYG00000018973	CPSF1	100	71.062	ENSSMAG00000020547	cpsf1	100	70.994	Scophthalmus_maximus
ENSPPYG00000018973	CPSF1	100	72.030	ENSSDUG00000001100	cpsf1	100	72.169	Seriola_dumerili
ENSPPYG00000018973	CPSF1	100	72.218	ENSSLDG00000003619	cpsf1	100	72.218	Seriola_lalandi_dorsalis
ENSPPYG00000018973	CPSF1	88	97.917	ENSSARG00000003643	CPSF1	92	97.917	Sorex_araneus
ENSPPYG00000018973	CPSF1	96	79.813	ENSSPUG00000014396	CPSF1	100	81.019	Sphenodon_punctatus
ENSPPYG00000018973	CPSF1	100	71.081	ENSSPAG00000005349	cpsf1	100	71.216	Stegastes_partitus
ENSPPYG00000018973	CPSF1	100	90.769	ENSSSCG00000005906	CPSF1	100	90.210	Sus_scrofa
ENSPPYG00000018973	CPSF1	96	70.510	ENSTRUG00000013134	cpsf1	99	70.650	Takifugu_rubripes
ENSPPYG00000018973	CPSF1	100	71.497	ENSTNIG00000014027	cpsf1	100	71.703	Tetraodon_nigroviridis
ENSPPYG00000018973	CPSF1	72	93.774	ENSTBEG00000001756	CPSF1	84	93.774	Tupaia_belangeri
ENSPPYG00000018973	CPSF1	89	89.119	ENSTTRG00000001937	CPSF1	90	89.119	Tursiops_truncatus
ENSPPYG00000018973	CPSF1	97	88.349	ENSUAMG00000006476	CPSF1	98	88.349	Ursus_americanus
ENSPPYG00000018973	CPSF1	100	70.422	ENSXCOG00000003608	cpsf1	100	70.698	Xiphophorus_couchianus
ENSPPYG00000018973	CPSF1	100	70.609	ENSXMAG00000005798	cpsf1	100	71.024	Xiphophorus_maculatus