EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000019244 (Gene tree)
Gene ID: 100448932
Gene Symbol: RCL1
Alias: RNAC|RPCL1
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 67066 bases
Position: chr9:58122158-58189223
Accession: 100448932
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000021552	RTC	PF01137.21	2.7e-61	1	1
ENSPPYP00000021552	RTC_insert	PF05189.13	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000022432	RCL1-201	1902	-	ENSPPYP00000021552	373 (aa)	XP_002819864	H2PS84

Gene Model

Click here to download ENSPPYG00000019244's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000019244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000019244	RCL1	100	99.732	ENSG00000120158	RCL1	100	99.732	Homo_sapiens
ENSPPYG00000019244	RCL1	100	79.144	ENSAPOG00000015666	rcl1	100	79.144	Acanthochromis_polyacanthus
ENSPPYG00000019244	RCL1	100	97.319	ENSAMEG00000002631	RCL1	100	97.319	Ailuropoda_melanoleuca
ENSPPYG00000019244	RCL1	99	79.730	ENSACIG00000021195	rcl1	99	79.730	Amphilophus_citrinellus
ENSPPYG00000019244	RCL1	100	78.610	ENSAOCG00000002223	rcl1	100	78.610	Amphiprion_ocellaris
ENSPPYG00000019244	RCL1	100	78.877	ENSAPEG00000006905	rcl1	100	78.877	Amphiprion_percula
ENSPPYG00000019244	RCL1	99	77.027	ENSATEG00000020026	rcl1	99	77.027	Anabas_testudineus
ENSPPYG00000019244	RCL1	88	87.500	ENSAPLG00000006031	RCL1	100	87.500	Anas_platyrhynchos
ENSPPYG00000019244	RCL1	100	85.523	ENSACAG00000003640	RCL1	100	85.523	Anolis_carolinensis
ENSPPYG00000019244	RCL1	100	98.660	ENSANAG00000037372	RCL1	100	98.660	Aotus_nancymaae
ENSPPYG00000019244	RCL1	99	79.189	ENSACLG00000021724	rcl1	99	79.189	Astatotilapia_calliptera
ENSPPYG00000019244	RCL1	98	78.261	ENSAMXG00000033394	rcl1	99	78.261	Astyanax_mexicanus
ENSPPYG00000019244	RCL1	99	47.074	WBGene00022852	ZK1127.5	99	47.074	Caenorhabditis_elegans
ENSPPYG00000019244	RCL1	100	99.464	ENSCJAG00000011202	RCL1	100	99.464	Callithrix_jacchus
ENSPPYG00000019244	RCL1	100	96.247	ENSCAFG00000002091	RCL1	100	96.247	Canis_familiaris
ENSPPYG00000019244	RCL1	100	96.247	ENSCAFG00020000638	RCL1	78	96.247	Canis_lupus_dingo
ENSPPYG00000019244	RCL1	100	96.783	ENSCHIG00000012407	RCL1	100	96.783	Capra_hircus
ENSPPYG00000019244	RCL1	88	98.471	ENSTSYG00000009592	RCL1	97	97.238	Carlito_syrichta
ENSPPYG00000019244	RCL1	68	80.925	ENSCAPG00000013575	RCL1	100	80.925	Cavia_aperea
ENSPPYG00000019244	RCL1	100	97.051	ENSCPOG00000015354	RCL1	100	97.051	Cavia_porcellus
ENSPPYG00000019244	RCL1	100	99.464	ENSCCAG00000033505	RCL1	100	99.464	Cebus_capucinus
ENSPPYG00000019244	RCL1	100	98.660	ENSCATG00000034721	RCL1	100	98.660	Cercocebus_atys
ENSPPYG00000019244	RCL1	100	97.319	ENSCLAG00000007445	RCL1	100	97.319	Chinchilla_lanigera
ENSPPYG00000019244	RCL1	100	99.196	ENSCSAG00000008811	RCL1	100	99.196	Chlorocebus_sabaeus
ENSPPYG00000019244	RCL1	87	81.734	ENSCHOG00000007216	RCL1	100	81.734	Choloepus_hoffmanni
ENSPPYG00000019244	RCL1	100	89.008	ENSCPBG00000025481	RCL1	94	89.058	Chrysemys_picta_bellii
ENSPPYG00000019244	RCL1	98	58.649	ENSCING00000019565	-	98	58.649	Ciona_intestinalis
ENSPPYG00000019244	RCL1	100	99.464	ENSCANG00000027099	RCL1	100	99.464	Colobus_angolensis_palliatus
ENSPPYG00000019244	RCL1	100	95.979	ENSCGRG00001013748	Rcl1	100	95.979	Cricetulus_griseus_chok1gshd
ENSPPYG00000019244	RCL1	88	95.732	ENSCGRG00000005843	Rcl1	99	95.732	Cricetulus_griseus_crigri
ENSPPYG00000019244	RCL1	99	79.189	ENSCSEG00000000712	rcl1	97	79.189	Cynoglossus_semilaevis
ENSPPYG00000019244	RCL1	99	80.811	ENSCVAG00000011536	rcl1	99	80.811	Cyprinodon_variegatus
ENSPPYG00000019244	RCL1	98	76.294	ENSDARG00000038312	rcl1	100	76.294	Danio_rerio
ENSPPYG00000019244	RCL1	71	96.604	ENSDNOG00000019911	RCL1	100	96.604	Dasypus_novemcinctus
ENSPPYG00000019244	RCL1	100	96.515	ENSDORG00000015645	Rcl1	100	96.515	Dipodomys_ordii
ENSPPYG00000019244	RCL1	99	54.233	FBgn0020909	Rtc1	98	54.233	Drosophila_melanogaster
ENSPPYG00000019244	RCL1	72	100.000	ENSETEG00000014087	-	82	100.000	Echinops_telfairi
ENSPPYG00000019244	RCL1	100	53.867	ENSEBUG00000016621	-	100	53.867	Eptatretus_burgeri
ENSPPYG00000019244	RCL1	100	97.587	ENSEASG00005010653	RCL1	100	97.587	Equus_asinus_asinus
ENSPPYG00000019244	RCL1	100	97.587	ENSECAG00000015973	RCL1	100	97.587	Equus_caballus
ENSPPYG00000019244	RCL1	100	81.769	ENSEEUG00000009801	RCL1	100	81.769	Erinaceus_europaeus
ENSPPYG00000019244	RCL1	100	75.668	ENSELUG00000007353	rcl1	100	75.668	Esox_lucius
ENSPPYG00000019244	RCL1	100	95.442	ENSFCAG00000014557	RCL1	100	95.442	Felis_catus
ENSPPYG00000019244	RCL1	95	83.099	ENSFALG00000010553	RCL1	94	83.099	Ficedula_albicollis
ENSPPYG00000019244	RCL1	88	96.330	ENSFDAG00000004209	RCL1	100	96.330	Fukomys_damarensis
ENSPPYG00000019244	RCL1	99	80.270	ENSFHEG00000011228	rcl1	99	80.270	Fundulus_heteroclitus
ENSPPYG00000019244	RCL1	99	77.297	ENSGMOG00000004677	rcl1	99	77.568	Gadus_morhua
ENSPPYG00000019244	RCL1	99	86.450	ENSGALG00000015024	RCL1	99	86.450	Gallus_gallus
ENSPPYG00000019244	RCL1	99	78.649	ENSGAFG00000007257	rcl1	99	78.649	Gambusia_affinis
ENSPPYG00000019244	RCL1	100	77.273	ENSGACG00000017474	rcl1	100	77.273	Gasterosteus_aculeatus
ENSPPYG00000019244	RCL1	100	89.544	ENSGAGG00000003689	RCL1	100	89.544	Gopherus_agassizii
ENSPPYG00000019244	RCL1	100	99.196	ENSGGOG00000015041	RCL1	100	99.196	Gorilla_gorilla
ENSPPYG00000019244	RCL1	99	79.459	ENSHBUG00000001393	rcl1	99	79.459	Haplochromis_burtoni
ENSPPYG00000019244	RCL1	100	97.319	ENSHGLG00000016452	RCL1	100	97.319	Heterocephalus_glaber_female
ENSPPYG00000019244	RCL1	100	81.233	ENSHGLG00000005368	-	100	80.697	Heterocephalus_glaber_female
ENSPPYG00000019244	RCL1	100	90.349	ENSHGLG00100008718	-	100	90.349	Heterocephalus_glaber_male
ENSPPYG00000019244	RCL1	100	82.306	ENSHGLG00100018010	-	100	81.769	Heterocephalus_glaber_male
ENSPPYG00000019244	RCL1	99	78.108	ENSHCOG00000020170	rcl1	99	78.108	Hippocampus_comes
ENSPPYG00000019244	RCL1	98	79.620	ENSIPUG00000018054	RCL1	99	79.620	Ictalurus_punctatus
ENSPPYG00000019244	RCL1	100	97.319	ENSSTOG00000000023	RCL1	100	97.319	Ictidomys_tridecemlineatus
ENSPPYG00000019244	RCL1	100	95.442	ENSJJAG00000022803	-	100	95.442	Jaculus_jaculus
ENSPPYG00000019244	RCL1	100	84.450	ENSJJAG00000015632	-	100	84.450	Jaculus_jaculus
ENSPPYG00000019244	RCL1	54	72.139	ENSJJAG00000000764	-	95	72.165	Jaculus_jaculus
ENSPPYG00000019244	RCL1	98	78.474	ENSKMAG00000011946	rcl1	99	78.474	Kryptolebias_marmoratus
ENSPPYG00000019244	RCL1	99	75.946	ENSLBEG00000003957	rcl1	99	75.946	Labrus_bergylta
ENSPPYG00000019244	RCL1	91	81.121	ENSLACG00000004594	RCL1	98	85.174	Latimeria_chalumnae
ENSPPYG00000019244	RCL1	100	81.501	ENSLOCG00000010148	rcl1	98	81.501	Lepisosteus_oculatus
ENSPPYG00000019244	RCL1	100	93.566	ENSLAFG00000017495	RCL1	100	93.566	Loxodonta_africana
ENSPPYG00000019244	RCL1	100	99.196	ENSMFAG00000037906	RCL1	100	99.196	Macaca_fascicularis
ENSPPYG00000019244	RCL1	100	99.196	ENSMNEG00000012288	RCL1	100	99.196	Macaca_nemestrina
ENSPPYG00000019244	RCL1	100	99.196	ENSMLEG00000043088	RCL1	100	99.196	Mandrillus_leucophaeus
ENSPPYG00000019244	RCL1	99	79.459	ENSMAMG00000008311	rcl1	99	79.459	Mastacembelus_armatus
ENSPPYG00000019244	RCL1	99	79.189	ENSMZEG00005017292	rcl1	99	79.189	Maylandia_zebra
ENSPPYG00000019244	RCL1	58	84.475	ENSMGAG00000002245	RCL1	97	84.434	Meleagris_gallopavo
ENSPPYG00000019244	RCL1	58	95.814	ENSMAUG00000008922	Rcl1	97	95.673	Mesocricetus_auratus
ENSPPYG00000019244	RCL1	100	96.783	ENSMICG00000015562	RCL1	100	96.783	Microcebus_murinus
ENSPPYG00000019244	RCL1	100	97.051	ENSMOCG00000012145	Rcl1	100	97.051	Microtus_ochrogaster
ENSPPYG00000019244	RCL1	99	76.280	ENSMMOG00000021264	rcl1	99	76.280	Mola_mola
ENSPPYG00000019244	RCL1	95	93.521	ENSMODG00000015377	RCL1	94	93.521	Monodelphis_domestica
ENSPPYG00000019244	RCL1	99	78.108	ENSMALG00000018618	rcl1	99	78.108	Monopterus_albus
ENSPPYG00000019244	RCL1	100	96.783	MGP_CAROLIEiJ_G0022853	Rcl1	100	96.783	Mus_caroli
ENSPPYG00000019244	RCL1	100	96.783	ENSMUSG00000024785	Rcl1	100	96.783	Mus_musculus
ENSPPYG00000019244	RCL1	100	96.247	MGP_PahariEiJ_G0014346	Rcl1	100	96.471	Mus_pahari
ENSPPYG00000019244	RCL1	100	95.979	MGP_SPRETEiJ_G0023771	Rcl1	100	95.979	Mus_spretus
ENSPPYG00000019244	RCL1	100	96.247	ENSMPUG00000004998	RCL1	100	96.247	Mustela_putorius_furo
ENSPPYG00000019244	RCL1	100	96.783	ENSMLUG00000009654	RCL1	100	96.783	Myotis_lucifugus
ENSPPYG00000019244	RCL1	100	97.319	ENSNGAG00000015327	Rcl1	100	97.319	Nannospalax_galili
ENSPPYG00000019244	RCL1	90	78.338	ENSNBRG00000019854	rcl1	96	74.860	Neolamprologus_brichardi
ENSPPYG00000019244	RCL1	100	96.515	ENSNLEG00000008891	RCL1	100	96.515	Nomascus_leucogenys
ENSPPYG00000019244	RCL1	100	86.863	ENSMEUG00000007653	RCL1	100	86.863	Notamacropus_eugenii
ENSPPYG00000019244	RCL1	100	96.515	ENSOPRG00000010965	RCL1	100	96.515	Ochotona_princeps
ENSPPYG00000019244	RCL1	88	79.819	ENSODEG00000004151	RCL1	96	80.793	Octodon_degus
ENSPPYG00000019244	RCL1	99	79.189	ENSONIG00000003871	rcl1	99	79.189	Oreochromis_niloticus
ENSPPYG00000019244	RCL1	67	87.352	ENSOANG00000013193	-	100	87.352	Ornithorhynchus_anatinus
ENSPPYG00000019244	RCL1	100	98.123	ENSOCUG00000008161	RCL1	100	98.123	Oryctolagus_cuniculus
ENSPPYG00000019244	RCL1	100	76.203	ENSORLG00000010443	rcl1	100	76.203	Oryzias_latipes
ENSPPYG00000019244	RCL1	100	76.203	ENSORLG00020012211	rcl1	100	76.203	Oryzias_latipes_hni
ENSPPYG00000019244	RCL1	100	75.936	ENSORLG00015001122	rcl1	100	75.936	Oryzias_latipes_hsok
ENSPPYG00000019244	RCL1	100	77.807	ENSOMEG00000022976	rcl1	88	77.807	Oryzias_melastigma
ENSPPYG00000019244	RCL1	100	95.710	ENSOGAG00000007480	RCL1	100	95.710	Otolemur_garnettii
ENSPPYG00000019244	RCL1	100	97.051	ENSOARG00000013463	RCL1	100	97.051	Ovis_aries
ENSPPYG00000019244	RCL1	100	99.464	ENSPPAG00000037958	RCL1	100	99.464	Pan_paniscus
ENSPPYG00000019244	RCL1	100	94.638	ENSPPRG00000022645	RCL1	100	94.638	Panthera_pardus
ENSPPYG00000019244	RCL1	87	95.399	ENSPTIG00000019031	RCL1	97	94.231	Panthera_tigris_altaica
ENSPPYG00000019244	RCL1	100	99.196	ENSPTRG00000020743	RCL1	100	99.196	Pan_troglodytes
ENSPPYG00000019244	RCL1	100	99.196	ENSPANG00000025151	RCL1	100	99.196	Papio_anubis
ENSPPYG00000019244	RCL1	100	77.807	ENSPKIG00000021022	rcl1	100	77.807	Paramormyrops_kingsleyae
ENSPPYG00000019244	RCL1	88	89.329	ENSPSIG00000012302	RCL1	100	89.329	Pelodiscus_sinensis
ENSPPYG00000019244	RCL1	100	77.005	ENSPMGG00000024007	rcl1	100	77.005	Periophthalmus_magnuspinnatus
ENSPPYG00000019244	RCL1	100	97.051	ENSPEMG00000023275	Rcl1	100	97.051	Peromyscus_maniculatus_bairdii
ENSPPYG00000019244	RCL1	97	30.959	ENSPMAG00000009110	rtca	96	30.959	Petromyzon_marinus
ENSPPYG00000019244	RCL1	100	93.834	ENSPCIG00000000188	RCL1	100	93.834	Phascolarctos_cinereus
ENSPPYG00000019244	RCL1	99	79.459	ENSPFOG00000019682	rcl1	99	79.459	Poecilia_formosa
ENSPPYG00000019244	RCL1	99	79.459	ENSPLAG00000022354	rcl1	99	79.459	Poecilia_latipinna
ENSPPYG00000019244	RCL1	99	79.459	ENSPMEG00000008131	rcl1	99	79.459	Poecilia_mexicana
ENSPPYG00000019244	RCL1	99	79.189	ENSPREG00000008032	rcl1	99	79.189	Poecilia_reticulata
ENSPPYG00000019244	RCL1	100	86.327	ENSPCAG00000001440	RCL1	100	86.327	Procavia_capensis
ENSPPYG00000019244	RCL1	100	98.123	ENSPCOG00000009611	RCL1	100	98.123	Propithecus_coquereli
ENSPPYG00000019244	RCL1	100	97.051	ENSPVAG00000015752	RCL1	100	97.051	Pteropus_vampyrus
ENSPPYG00000019244	RCL1	99	79.189	ENSPNYG00000012910	rcl1	99	79.189	Pundamilia_nyererei
ENSPPYG00000019244	RCL1	99	78.284	ENSPNAG00000028307	rcl1	92	78.284	Pygocentrus_nattereri
ENSPPYG00000019244	RCL1	100	96.515	ENSRNOG00000015491	Rcl1	100	96.515	Rattus_norvegicus
ENSPPYG00000019244	RCL1	100	99.196	ENSRBIG00000035818	RCL1	100	99.196	Rhinopithecus_bieti
ENSPPYG00000019244	RCL1	100	99.196	ENSRROG00000029781	RCL1	100	99.196	Rhinopithecus_roxellana
ENSPPYG00000019244	RCL1	98	36.486	YOL010W	-	97	35.310	Saccharomyces_cerevisiae
ENSPPYG00000019244	RCL1	100	98.928	ENSSBOG00000026369	RCL1	100	98.928	Saimiri_boliviensis_boliviensis
ENSPPYG00000019244	RCL1	88	92.424	ENSSHAG00000014086	RCL1	100	92.424	Sarcophilus_harrisii
ENSPPYG00000019244	RCL1	100	78.075	ENSSFOG00015023020	rcl1	100	78.075	Scleropages_formosus
ENSPPYG00000019244	RCL1	99	78.919	ENSSMAG00000019751	rcl1	85	78.919	Scophthalmus_maximus
ENSPPYG00000019244	RCL1	100	78.342	ENSSDUG00000006349	rcl1	100	78.342	Seriola_dumerili
ENSPPYG00000019244	RCL1	100	78.610	ENSSLDG00000022076	rcl1	100	78.610	Seriola_lalandi_dorsalis
ENSPPYG00000019244	RCL1	100	95.979	ENSSARG00000009260	RCL1	100	95.979	Sorex_araneus
ENSPPYG00000019244	RCL1	100	87.936	ENSSPUG00000016330	RCL1	100	87.936	Sphenodon_punctatus
ENSPPYG00000019244	RCL1	100	80.481	ENSSPAG00000018038	rcl1	100	80.481	Stegastes_partitus
ENSPPYG00000019244	RCL1	100	97.855	ENSSSCG00000005217	RCL1	83	97.855	Sus_scrofa
ENSPPYG00000019244	RCL1	100	85.333	ENSTGUG00000005138	RCL1	100	85.333	Taeniopygia_guttata
ENSPPYG00000019244	RCL1	99	78.919	ENSTRUG00000010493	rcl1	99	78.919	Takifugu_rubripes
ENSPPYG00000019244	RCL1	99	77.778	ENSTNIG00000013214	rcl1	99	77.778	Tetraodon_nigroviridis
ENSPPYG00000019244	RCL1	100	91.153	ENSTBEG00000016339	RCL1	100	91.153	Tupaia_belangeri
ENSPPYG00000019244	RCL1	100	96.515	ENSTTRG00000016525	RCL1	100	96.515	Tursiops_truncatus
ENSPPYG00000019244	RCL1	100	97.319	ENSUAMG00000005598	RCL1	100	97.319	Ursus_americanus
ENSPPYG00000019244	RCL1	88	96.330	ENSUMAG00000017890	RCL1	97	96.330	Ursus_maritimus
ENSPPYG00000019244	RCL1	88	97.859	ENSVPAG00000009188	RCL1	100	97.859	Vicugna_pacos
ENSPPYG00000019244	RCL1	88	96.341	ENSVVUG00000007304	RCL1	89	96.341	Vulpes_vulpes
ENSPPYG00000019244	RCL1	100	75.668	ENSXETG00000000592	rcl1	100	75.668	Xenopus_tropicalis
ENSPPYG00000019244	RCL1	99	79.459	ENSXCOG00000004922	rcl1	99	79.459	Xiphophorus_couchianus
ENSPPYG00000019244	RCL1	59	30.000	ENSXCOG00000008002	rtca	63	30.000	Xiphophorus_couchianus
ENSPPYG00000019244	RCL1	99	79.459	ENSXMAG00000022366	RCL1	99	79.459	Xiphophorus_maculatus