EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000019694 (Gene tree)
Gene ID: -
Gene Symbol: PRDM12
Alias: PFM9
Full Name: PR/SET domain 12
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 20545 bases
Position: chr9:127578903-127599447
Accession: 13997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000022077	zf-C2H2	PF00096.26	6.1e-13	1	2
ENSPPYP00000022077	zf-C2H2	PF00096.26	6.1e-13	2	2
ENSPPYP00000022077	zf-met	PF12874.7	5.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000022986	PRDM12-201	1053	-	ENSPPYP00000022077	351 (aa)	-	H2PTP5

Gene Model

Click here to download ENSPPYG00000019694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000019694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000019694	PRDM12	71	42.353	ENSPPYG00000015031	PRDM5	91	42.353

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000019694	PRDM12	100	97.436	ENSG00000130711	PRDM12	96	97.436	Homo_sapiens
ENSPPYG00000019694	PRDM12	92	80.580	ENSAPOG00000016051	prdm12b	94	78.333	Acanthochromis_polyacanthus
ENSPPYG00000019694	PRDM12	99	64.689	ENSAPOG00000018234	-	96	65.156	Acanthochromis_polyacanthus
ENSPPYG00000019694	PRDM12	92	95.046	ENSAMEG00000016234	PRDM12	99	95.046	Ailuropoda_melanoleuca
ENSPPYG00000019694	PRDM12	96	77.174	ENSACIG00000005193	-	97	77.174	Amphilophus_citrinellus
ENSPPYG00000019694	PRDM12	94	79.539	ENSACIG00000019578	prdm12b	96	78.116	Amphilophus_citrinellus
ENSPPYG00000019694	PRDM12	92	81.818	ENSAOCG00000015040	prdm12b	94	79.494	Amphiprion_ocellaris
ENSPPYG00000019694	PRDM12	93	79.762	ENSAPEG00000022849	-	89	78.363	Amphiprion_percula
ENSPPYG00000019694	PRDM12	92	82.544	ENSAPEG00000015092	prdm12b	94	80.170	Amphiprion_percula
ENSPPYG00000019694	PRDM12	92	82.067	ENSATEG00000014595	-	96	82.067	Anabas_testudineus
ENSPPYG00000019694	PRDM12	97	98.824	ENSANAG00000020616	PRDM12	100	98.824	Aotus_nancymaae
ENSPPYG00000019694	PRDM12	92	80.994	ENSACLG00000007631	-	87	80.994	Astatotilapia_calliptera
ENSPPYG00000019694	PRDM12	98	80.460	ENSACLG00000011876	prdm12b	96	80.460	Astatotilapia_calliptera
ENSPPYG00000019694	PRDM12	93	84.049	ENSAMXG00000008540	PRDM12	90	84.049	Astyanax_mexicanus
ENSPPYG00000019694	PRDM12	93	87.988	ENSAMXG00000033665	prdm12b	93	86.087	Astyanax_mexicanus
ENSPPYG00000019694	PRDM12	100	96.866	ENSBTAG00000023797	PRDM12	97	96.866	Bos_taurus
ENSPPYG00000019694	PRDM12	100	97.721	ENSCJAG00000020540	PRDM12	98	97.721	Callithrix_jacchus
ENSPPYG00000019694	PRDM12	83	97.595	ENSCAFG00000023076	PRDM12	96	95.779	Canis_familiaris
ENSPPYG00000019694	PRDM12	100	97.151	ENSCAFG00020024046	PRDM12	96	97.151	Canis_lupus_dingo
ENSPPYG00000019694	PRDM12	100	97.151	ENSCHIG00000025005	PRDM12	97	97.151	Capra_hircus
ENSPPYG00000019694	PRDM12	89	97.444	ENSCPOG00000005901	PRDM12	95	97.444	Cavia_porcellus
ENSPPYG00000019694	PRDM12	100	97.721	ENSCCAG00000037485	PRDM12	97	97.721	Cebus_capucinus
ENSPPYG00000019694	PRDM12	100	97.721	ENSCATG00000020327	PRDM12	97	97.721	Cercocebus_atys
ENSPPYG00000019694	PRDM12	94	97.281	ENSCLAG00000005499	PRDM12	91	97.281	Chinchilla_lanigera
ENSPPYG00000019694	PRDM12	100	97.721	ENSCSAG00000014756	PRDM12	96	97.721	Chlorocebus_sabaeus
ENSPPYG00000019694	PRDM12	98	91.279	ENSCPBG00000022628	PRDM12	97	91.279	Chrysemys_picta_bellii
ENSPPYG00000019694	PRDM12	95	97.904	ENSCGRG00001015005	Prdm12	96	96.296	Cricetulus_griseus_chok1gshd
ENSPPYG00000019694	PRDM12	92	78.098	ENSCVAG00000000944	-	89	78.098	Cyprinodon_variegatus
ENSPPYG00000019694	PRDM12	92	83.234	ENSCVAG00000017166	prdm12b	94	80.802	Cyprinodon_variegatus
ENSPPYG00000019694	PRDM12	92	87.538	ENSDARG00000007430	prdm12b	90	87.538	Danio_rerio
ENSPPYG00000019694	PRDM12	95	97.904	ENSDNOG00000042302	PRDM12	96	96.296	Dasypus_novemcinctus
ENSPPYG00000019694	PRDM12	91	63.037	ENSEBUG00000016780	prdm12b	77	64.470	Eptatretus_burgeri
ENSPPYG00000019694	PRDM12	100	96.581	ENSEASG00005008472	PRDM12	97	96.581	Equus_asinus_asinus
ENSPPYG00000019694	PRDM12	100	96.296	ENSECAG00000005933	PRDM12	97	96.296	Equus_caballus
ENSPPYG00000019694	PRDM12	92	83.025	ENSELUG00000013674	PRDM12	89	83.025	Esox_lucius
ENSPPYG00000019694	PRDM12	93	86.567	ENSELUG00000009905	prdm12b	90	86.567	Esox_lucius
ENSPPYG00000019694	PRDM12	100	97.151	ENSFCAG00000043086	PRDM12	97	97.151	Felis_catus
ENSPPYG00000019694	PRDM12	98	91.570	ENSFALG00000001445	PRDM12	87	91.570	Ficedula_albicollis
ENSPPYG00000019694	PRDM12	92	82.789	ENSFHEG00000003944	prdm12b	94	80.682	Fundulus_heteroclitus
ENSPPYG00000019694	PRDM12	92	79.646	ENSFHEG00000007746	-	88	79.941	Fundulus_heteroclitus
ENSPPYG00000019694	PRDM12	92	83.587	ENSGMOG00000011797	prdm12b	96	80.352	Gadus_morhua
ENSPPYG00000019694	PRDM12	98	91.570	ENSGALG00000003895	PRDM12	97	91.570	Gallus_gallus
ENSPPYG00000019694	PRDM12	93	83.735	ENSGAFG00000010827	prdm12b	96	79.666	Gambusia_affinis
ENSPPYG00000019694	PRDM12	99	80.000	ENSGACG00000016713	prdm12b	95	80.000	Gasterosteus_aculeatus
ENSPPYG00000019694	PRDM12	98	91.570	ENSGAGG00000014083	PRDM12	97	91.570	Gopherus_agassizii
ENSPPYG00000019694	PRDM12	100	97.151	ENSGGOG00000010568	PRDM12	96	97.151	Gorilla_gorilla
ENSPPYG00000019694	PRDM12	98	78.830	ENSHBUG00000022878	prdm12b	96	79.666	Haplochromis_burtoni
ENSPPYG00000019694	PRDM12	92	80.994	ENSHBUG00000022537	-	80	80.994	Haplochromis_burtoni
ENSPPYG00000019694	PRDM12	95	96.707	ENSHGLG00000013939	PRDM12	96	94.872	Heterocephalus_glaber_female
ENSPPYG00000019694	PRDM12	92	80.702	ENSHCOG00000003663	prdm12b	89	79.083	Hippocampus_comes
ENSPPYG00000019694	PRDM12	98	74.148	ENSHCOG00000021167	-	98	74.148	Hippocampus_comes
ENSPPYG00000019694	PRDM12	93	87.387	ENSIPUG00000017053	prdm12b	93	85.217	Ictalurus_punctatus
ENSPPYG00000019694	PRDM12	92	82.012	ENSIPUG00000019544	PRDM12	90	82.012	Ictalurus_punctatus
ENSPPYG00000019694	PRDM12	98	96.243	ENSSTOG00000005986	PRDM12	91	96.243	Ictidomys_tridecemlineatus
ENSPPYG00000019694	PRDM12	94	98.182	ENSJJAG00000005424	Prdm12	100	98.182	Jaculus_jaculus
ENSPPYG00000019694	PRDM12	93	77.562	ENSKMAG00000016921	prdm12b	92	75.603	Kryptolebias_marmoratus
ENSPPYG00000019694	PRDM12	91	81.040	ENSKMAG00000021205	-	92	81.040	Kryptolebias_marmoratus
ENSPPYG00000019694	PRDM12	92	81.009	ENSLBEG00000007776	-	89	81.306	Labrus_bergylta
ENSPPYG00000019694	PRDM12	92	83.832	ENSLBEG00000017769	prdm12b	95	80.000	Labrus_bergylta
ENSPPYG00000019694	PRDM12	97	89.118	ENSLACG00000017560	PRDM12	96	89.118	Latimeria_chalumnae
ENSPPYG00000019694	PRDM12	92	88.344	ENSLOCG00000005429	prdm12b	96	84.483	Lepisosteus_oculatus
ENSPPYG00000019694	PRDM12	99	95.739	ENSLAFG00000006979	PRDM12	94	95.739	Loxodonta_africana
ENSPPYG00000019694	PRDM12	99	97.989	ENSMFAG00000040322	PRDM12	95	97.989	Macaca_fascicularis
ENSPPYG00000019694	PRDM12	100	97.721	ENSMNEG00000037234	PRDM12	97	97.721	Macaca_nemestrina
ENSPPYG00000019694	PRDM12	92	80.952	ENSMAMG00000018988	-	86	80.952	Mastacembelus_armatus
ENSPPYG00000019694	PRDM12	92	83.086	ENSMAMG00000013212	prdm12b	94	80.682	Mastacembelus_armatus
ENSPPYG00000019694	PRDM12	92	80.994	ENSMZEG00005000415	PRDM12	86	80.994	Maylandia_zebra
ENSPPYG00000019694	PRDM12	98	91.570	ENSMGAG00000005438	PRDM12	97	91.570	Meleagris_gallopavo
ENSPPYG00000019694	PRDM12	97	97.067	ENSMAUG00000013040	Prdm12	96	95.157	Mesocricetus_auratus
ENSPPYG00000019694	PRDM12	100	96.581	ENSMICG00000015480	PRDM12	97	96.581	Microcebus_murinus
ENSPPYG00000019694	PRDM12	99	95.389	ENSMOCG00000021026	Prdm12	93	97.076	Microtus_ochrogaster
ENSPPYG00000019694	PRDM12	98	93.605	ENSMODG00000012108	PRDM12	97	93.605	Monodelphis_domestica
ENSPPYG00000019694	PRDM12	97	69.253	ENSMALG00000021901	prdm12b	93	69.253	Monopterus_albus
ENSPPYG00000019694	PRDM12	95	97.605	MGP_CAROLIEiJ_G0023414	Prdm12	96	96.011	Mus_caroli
ENSPPYG00000019694	PRDM12	95	97.605	ENSMUSG00000079466	Prdm12	96	96.011	Mus_musculus
ENSPPYG00000019694	PRDM12	95	97.605	MGP_PahariEiJ_G0024871	Prdm12	96	96.011	Mus_pahari
ENSPPYG00000019694	PRDM12	95	97.605	MGP_SPRETEiJ_G0024331	Prdm12	96	96.011	Mus_spretus
ENSPPYG00000019694	PRDM12	93	97.859	ENSNGAG00000018480	Prdm12	97	94.269	Nannospalax_galili
ENSPPYG00000019694	PRDM12	93	80.523	ENSNBRG00000006727	prdm12b	96	79.006	Neolamprologus_brichardi
ENSPPYG00000019694	PRDM12	95	75.802	ENSNBRG00000024312	-	96	76.093	Neolamprologus_brichardi
ENSPPYG00000019694	PRDM12	98	83.140	ENSMEUG00000003828	PRDM12	97	83.140	Notamacropus_eugenii
ENSPPYG00000019694	PRDM12	94	97.879	ENSOPRG00000008680	PRDM12	100	97.879	Ochotona_princeps
ENSPPYG00000019694	PRDM12	97	96.491	ENSODEG00000016282	PRDM12	64	96.491	Octodon_degus
ENSPPYG00000019694	PRDM12	59	93.237	ENSOANG00000001043	PRDM12	95	93.237	Ornithorhynchus_anatinus
ENSPPYG00000019694	PRDM12	87	93.791	ENSOCUG00000008241	PRDM12	98	93.791	Oryctolagus_cuniculus
ENSPPYG00000019694	PRDM12	98	78.453	ENSORLG00000007114	prdm12b	96	79.006	Oryzias_latipes
ENSPPYG00000019694	PRDM12	92	79.472	ENSORLG00000017558	-	87	80.059	Oryzias_latipes
ENSPPYG00000019694	PRDM12	93	81.105	ENSORLG00020019565	prdm12b	94	79.609	Oryzias_latipes_hni
ENSPPYG00000019694	PRDM12	92	79.240	ENSORLG00020013167	-	87	79.825	Oryzias_latipes_hni
ENSPPYG00000019694	PRDM12	92	79.472	ENSORLG00015003435	-	87	80.059	Oryzias_latipes_hsok
ENSPPYG00000019694	PRDM12	93	80.814	ENSORLG00015007621	prdm12b	94	79.666	Oryzias_latipes_hsok
ENSPPYG00000019694	PRDM12	92	78.674	ENSOMEG00000007762	-	93	78.963	Oryzias_melastigma
ENSPPYG00000019694	PRDM12	93	80.692	ENSOMEG00000004134	prdm12b	94	78.670	Oryzias_melastigma
ENSPPYG00000019694	PRDM12	95	99.096	ENSOGAG00000007557	PRDM12	99	99.096	Otolemur_garnettii
ENSPPYG00000019694	PRDM12	82	99.303	ENSPPAG00000031506	-	97	99.303	Pan_paniscus
ENSPPYG00000019694	PRDM12	99	89.080	ENSPPRG00000023024	PRDM12	89	89.080	Panthera_pardus
ENSPPYG00000019694	PRDM12	100	97.436	ENSPTRG00000021475	PRDM12	96	97.436	Pan_troglodytes
ENSPPYG00000019694	PRDM12	100	97.436	ENSPTRG00000043324	-	96	97.436	Pan_troglodytes
ENSPPYG00000019694	PRDM12	100	97.721	ENSPANG00000025967	PRDM12	97	97.721	Papio_anubis
ENSPPYG00000019694	PRDM12	97	78.348	ENSPKIG00000004305	PRDM12	99	78.632	Paramormyrops_kingsleyae
ENSPPYG00000019694	PRDM12	93	85.799	ENSPKIG00000007228	prdm12b	96	83.193	Paramormyrops_kingsleyae
ENSPPYG00000019694	PRDM12	98	90.698	ENSPSIG00000006739	PRDM12	97	90.698	Pelodiscus_sinensis
ENSPPYG00000019694	PRDM12	95	81.009	ENSPMGG00000002356	-	88	81.009	Periophthalmus_magnuspinnatus
ENSPPYG00000019694	PRDM12	93	82.789	ENSPMGG00000008867	prdm12b	95	80.000	Periophthalmus_magnuspinnatus
ENSPPYG00000019694	PRDM12	99	94.798	ENSPEMG00000009969	Prdm12	95	94.798	Peromyscus_maniculatus_bairdii
ENSPPYG00000019694	PRDM12	98	93.895	ENSPCIG00000024119	PRDM12	97	93.895	Phascolarctos_cinereus
ENSPPYG00000019694	PRDM12	92	83.333	ENSPFOG00000019841	prdm12b	91	83.333	Poecilia_formosa
ENSPPYG00000019694	PRDM12	93	84.036	ENSPLAG00000016626	prdm12b	92	81.556	Poecilia_latipinna
ENSPPYG00000019694	PRDM12	90	83.540	ENSPMEG00000016698	prdm12b	92	81.009	Poecilia_mexicana
ENSPPYG00000019694	PRDM12	95	75.652	ENSPREG00000003211	-	94	75.652	Poecilia_reticulata
ENSPPYG00000019694	PRDM12	93	83.881	ENSPREG00000015073	prdm12b	96	79.235	Poecilia_reticulata
ENSPPYG00000019694	PRDM12	100	96.866	ENSPCOG00000022255	PRDM12	96	96.866	Propithecus_coquereli
ENSPPYG00000019694	PRDM12	100	96.866	ENSPVAG00000001511	PRDM12	95	96.866	Pteropus_vampyrus
ENSPPYG00000019694	PRDM12	92	80.994	ENSPNYG00000013589	-	86	80.994	Pundamilia_nyererei
ENSPPYG00000019694	PRDM12	98	78.116	ENSPNYG00000009607	prdm12b	96	78.947	Pundamilia_nyererei
ENSPPYG00000019694	PRDM12	92	80.606	ENSPNAG00000013396	PRDM12	88	80.606	Pygocentrus_nattereri
ENSPPYG00000019694	PRDM12	93	88.589	ENSPNAG00000024532	prdm12b	90	88.589	Pygocentrus_nattereri
ENSPPYG00000019694	PRDM12	95	97.605	ENSRNOG00000009218	Prdm12	96	96.011	Rattus_norvegicus
ENSPPYG00000019694	PRDM12	90	100.000	ENSRBIG00000042712	PRDM12	98	92.113	Rhinopithecus_bieti
ENSPPYG00000019694	PRDM12	91	100.000	ENSRROG00000043554	PRDM12	100	100.000	Rhinopithecus_roxellana
ENSPPYG00000019694	PRDM12	98	93.043	ENSSHAG00000015972	PRDM12	97	93.043	Sarcophilus_harrisii
ENSPPYG00000019694	PRDM12	92	79.714	ENSSMAG00000003754	prdm12b	93	77.901	Scophthalmus_maximus
ENSPPYG00000019694	PRDM12	97	78.670	ENSSDUG00000023498	prdm12b	94	78.670	Seriola_dumerili
ENSPPYG00000019694	PRDM12	98	79.714	ENSSDUG00000019071	-	97	79.714	Seriola_dumerili
ENSPPYG00000019694	PRDM12	92	84.049	ENSSLDG00000013562	-	93	84.049	Seriola_lalandi_dorsalis
ENSPPYG00000019694	PRDM12	97	79.050	ENSSLDG00000009557	prdm12b	94	79.330	Seriola_lalandi_dorsalis
ENSPPYG00000019694	PRDM12	98	90.988	ENSSPUG00000013424	PRDM12	97	90.988	Sphenodon_punctatus
ENSPPYG00000019694	PRDM12	92	71.976	ENSSPAG00000022420	-	87	74.769	Stegastes_partitus
ENSPPYG00000019694	PRDM12	92	81.287	ENSSPAG00000018824	prdm12b	94	79.552	Stegastes_partitus
ENSPPYG00000019694	PRDM12	100	97.151	ENSSSCG00000005703	PRDM12	96	97.151	Sus_scrofa
ENSPPYG00000019694	PRDM12	95	79.300	ENSTRUG00000013239	-	96	79.592	Takifugu_rubripes
ENSPPYG00000019694	PRDM12	92	83.735	ENSTRUG00000018659	prdm12b	94	81.268	Takifugu_rubripes
ENSPPYG00000019694	PRDM12	95	78.529	ENSTNIG00000005859	-	96	78.529	Tetraodon_nigroviridis
ENSPPYG00000019694	PRDM12	92	84.384	ENSTNIG00000009020	prdm12b	93	81.609	Tetraodon_nigroviridis
ENSPPYG00000019694	PRDM12	95	98.802	ENSUAMG00000009653	PRDM12	97	96.562	Ursus_americanus
ENSPPYG00000019694	PRDM12	95	99.096	ENSVVUG00000027662	PRDM12	79	99.096	Vulpes_vulpes
ENSPPYG00000019694	PRDM12	93	83.735	ENSXCOG00000002836	prdm12b	93	81.268	Xiphophorus_couchianus
ENSPPYG00000019694	PRDM12	92	80.655	ENSXMAG00000028012	-	87	80.655	Xiphophorus_maculatus
ENSPPYG00000019694	PRDM12	92	83.234	ENSXMAG00000005537	prdm12b	93	80.802	Xiphophorus_maculatus