EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000020541 (Gene tree)
Gene ID: 100171993
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 23203 bases
Position: chrX:99806636-99829838
Accession: 2484
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000022995	RRM_1	PF00076.22	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000023963	CSTF2-201	4626	-	ENSPPYP00000022995	597 (aa)	-	H2PW87

Gene Model

Click here to download ENSPPYG00000020541's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000020541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000020541	CSTF2	99	65.909	ENSPPYG00000002441	CSTF2T	99	66.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000020541	CSTF2	100	99.832	ENSG00000101811	CSTF2	100	99.832	Homo_sapiens
ENSPPYG00000020541	CSTF2	99	58.902	ENSAPOG00000005630	cstf2	97	60.231	Acanthochromis_polyacanthus
ENSPPYG00000020541	CSTF2	100	96.026	ENSAMEG00000002082	CSTF2	100	96.026	Ailuropoda_melanoleuca
ENSPPYG00000020541	CSTF2	84	82.231	ENSACIG00000012852	cstf2	96	56.040	Amphilophus_citrinellus
ENSPPYG00000020541	CSTF2	99	57.930	ENSAOCG00000020905	cstf2	97	59.603	Amphiprion_ocellaris
ENSPPYG00000020541	CSTF2	99	57.930	ENSAPEG00000006526	cstf2	97	59.934	Amphiprion_percula
ENSPPYG00000020541	CSTF2	99	55.574	ENSATEG00000018186	cstf2	97	57.377	Anabas_testudineus
ENSPPYG00000020541	CSTF2	97	78.778	ENSAPLG00000007255	CSTF2	98	78.319	Anas_platyrhynchos
ENSPPYG00000020541	CSTF2	100	98.492	ENSANAG00000022342	CSTF2	100	98.492	Aotus_nancymaae
ENSPPYG00000020541	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSPPYG00000020541	CSTF2	100	95.142	ENSBTAG00000003547	CSTF2	100	95.142	Bos_taurus
ENSPPYG00000020541	CSTF2	100	98.995	ENSCJAG00000004422	CSTF2	100	98.995	Callithrix_jacchus
ENSPPYG00000020541	CSTF2	100	93.300	ENSCAFG00000017551	CSTF2	100	93.300	Canis_familiaris
ENSPPYG00000020541	CSTF2	100	96.650	ENSCAFG00020007619	CSTF2	100	96.650	Canis_lupus_dingo
ENSPPYG00000020541	CSTF2	100	95.477	ENSCHIG00000016994	CSTF2	100	95.477	Capra_hircus
ENSPPYG00000020541	CSTF2	100	98.492	ENSTSYG00000006529	CSTF2	100	98.492	Carlito_syrichta
ENSPPYG00000020541	CSTF2	100	95.980	ENSCPOG00000015255	CSTF2	100	95.980	Cavia_porcellus
ENSPPYG00000020541	CSTF2	100	98.995	ENSCCAG00000032975	CSTF2	100	98.995	Cebus_capucinus
ENSPPYG00000020541	CSTF2	100	99.665	ENSCATG00000022835	CSTF2	100	99.665	Cercocebus_atys
ENSPPYG00000020541	CSTF2	100	96.147	ENSCLAG00000001904	CSTF2	100	96.147	Chinchilla_lanigera
ENSPPYG00000020541	CSTF2	100	99.832	ENSCSAG00000010360	CSTF2	100	99.832	Chlorocebus_sabaeus
ENSPPYG00000020541	CSTF2	66	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSPPYG00000020541	CSTF2	100	76.516	ENSCPBG00000014293	CSTF2	100	76.271	Chrysemys_picta_bellii
ENSPPYG00000020541	CSTF2	100	99.832	ENSCANG00000030612	CSTF2	100	99.832	Colobus_angolensis_palliatus
ENSPPYG00000020541	CSTF2	100	89.667	ENSCGRG00001023023	Cstf2	100	89.667	Cricetulus_griseus_chok1gshd
ENSPPYG00000020541	CSTF2	100	86.667	ENSCGRG00000003897	Cstf2	100	86.667	Cricetulus_griseus_crigri
ENSPPYG00000020541	CSTF2	84	82.988	ENSCVAG00000005731	cstf2	96	60.399	Cyprinodon_variegatus
ENSPPYG00000020541	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSPPYG00000020541	CSTF2	100	89.816	ENSDORG00000007195	Cstf2	100	89.816	Dipodomys_ordii
ENSPPYG00000020541	CSTF2	73	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSPPYG00000020541	CSTF2	100	96.817	ENSEASG00005001216	CSTF2	100	96.817	Equus_asinus_asinus
ENSPPYG00000020541	CSTF2	100	96.817	ENSECAG00000009325	CSTF2	100	96.817	Equus_caballus
ENSPPYG00000020541	CSTF2	100	96.985	ENSFCAG00000007000	CSTF2	100	96.985	Felis_catus
ENSPPYG00000020541	CSTF2	92	77.660	ENSFALG00000003859	CSTF2	100	77.837	Ficedula_albicollis
ENSPPYG00000020541	CSTF2	100	93.300	ENSFDAG00000002416	CSTF2	100	93.300	Fukomys_damarensis
ENSPPYG00000020541	CSTF2	84	81.148	ENSFHEG00000017065	cstf2	93	61.139	Fundulus_heteroclitus
ENSPPYG00000020541	CSTF2	99	51.839	ENSGMOG00000005145	cstf2	99	55.574	Gadus_morhua
ENSPPYG00000020541	CSTF2	100	76.403	ENSGALG00000006760	CSTF2	100	85.333	Gallus_gallus
ENSPPYG00000020541	CSTF2	99	55.051	ENSGACG00000017326	cstf2	78	81.633	Gasterosteus_aculeatus
ENSPPYG00000020541	CSTF2	100	78.469	ENSGAGG00000006037	CSTF2	100	78.357	Gopherus_agassizii
ENSPPYG00000020541	CSTF2	100	99.832	ENSGGOG00000022267	CSTF2	100	99.832	Gorilla_gorilla
ENSPPYG00000020541	CSTF2	100	93.635	ENSHGLG00000000659	-	100	93.635	Heterocephalus_glaber_female
ENSPPYG00000020541	CSTF2	100	79.397	ENSHGLG00000013455	-	100	79.397	Heterocephalus_glaber_female
ENSPPYG00000020541	CSTF2	100	93.635	ENSHGLG00100001130	-	100	93.635	Heterocephalus_glaber_male
ENSPPYG00000020541	CSTF2	100	79.564	ENSHGLG00100015391	-	100	79.564	Heterocephalus_glaber_male
ENSPPYG00000020541	CSTF2	99	57.048	ENSHCOG00000005157	cstf2	97	59.699	Hippocampus_comes
ENSPPYG00000020541	CSTF2	100	59.308	ENSIPUG00000017839	cstf2	99	60.791	Ictalurus_punctatus
ENSPPYG00000020541	CSTF2	100	92.797	ENSSTOG00000023445	CSTF2	100	92.797	Ictidomys_tridecemlineatus
ENSPPYG00000020541	CSTF2	100	91.457	ENSJJAG00000020507	Cstf2	100	91.457	Jaculus_jaculus
ENSPPYG00000020541	CSTF2	52	94.915	ENSLBEG00000028720	cstf2	76	89.062	Labrus_bergylta
ENSPPYG00000020541	CSTF2	99	64.688	ENSLACG00000015927	CSTF2	99	67.805	Latimeria_chalumnae
ENSPPYG00000020541	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	62.645	Lepisosteus_oculatus
ENSPPYG00000020541	CSTF2	100	92.462	ENSLAFG00000000474	CSTF2	100	92.462	Loxodonta_africana
ENSPPYG00000020541	CSTF2	100	99.832	ENSMFAG00000043888	CSTF2	100	99.832	Macaca_fascicularis
ENSPPYG00000020541	CSTF2	100	98.995	ENSMMUG00000013008	CSTF2	100	98.995	Macaca_mulatta
ENSPPYG00000020541	CSTF2	100	99.832	ENSMNEG00000041824	CSTF2	100	99.832	Macaca_nemestrina
ENSPPYG00000020541	CSTF2	100	99.832	ENSMLEG00000036870	CSTF2	100	99.832	Mandrillus_leucophaeus
ENSPPYG00000020541	CSTF2	82	79.399	ENSMAMG00000020364	cstf2	96	58.291	Mastacembelus_armatus
ENSPPYG00000020541	CSTF2	93	67.150	ENSMGAG00000004139	CSTF2	100	84.861	Meleagris_gallopavo
ENSPPYG00000020541	CSTF2	100	90.000	ENSMAUG00000000965	Cstf2	100	90.000	Mesocricetus_auratus
ENSPPYG00000020541	CSTF2	100	96.650	ENSMICG00000014121	CSTF2	100	96.650	Microcebus_murinus
ENSPPYG00000020541	CSTF2	100	88.667	ENSMOCG00000008081	Cstf2	100	88.667	Microtus_ochrogaster
ENSPPYG00000020541	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	53.223	Mola_mola
ENSPPYG00000020541	CSTF2	100	80.066	ENSMODG00000011785	CSTF2	100	82.013	Monodelphis_domestica
ENSPPYG00000020541	CSTF2	100	90.000	MGP_CAROLIEiJ_G0033383	Cstf2	100	90.000	Mus_caroli
ENSPPYG00000020541	CSTF2	100	90.000	ENSMUSG00000031256	Cstf2	100	90.000	Mus_musculus
ENSPPYG00000020541	CSTF2	100	89.983	MGP_PahariEiJ_G0031923	Cstf2	100	90.150	Mus_pahari
ENSPPYG00000020541	CSTF2	100	90.000	MGP_SPRETEiJ_G0034548	Cstf2	100	90.000	Mus_spretus
ENSPPYG00000020541	CSTF2	100	91.270	ENSMPUG00000002339	CSTF2	100	91.270	Mustela_putorius_furo
ENSPPYG00000020541	CSTF2	100	89.507	ENSMLUG00000004598	CSTF2	98	89.507	Myotis_lucifugus
ENSPPYG00000020541	CSTF2	100	91.820	ENSNGAG00000021985	Cstf2	100	91.987	Nannospalax_galili
ENSPPYG00000020541	CSTF2	61	79.310	ENSNBRG00000021694	cstf2	100	54.905	Neolamprologus_brichardi
ENSPPYG00000020541	CSTF2	100	99.832	ENSNLEG00000007510	CSTF2	100	99.832	Nomascus_leucogenys
ENSPPYG00000020541	CSTF2	100	79.229	ENSMEUG00000011186	-	100	81.072	Notamacropus_eugenii
ENSPPYG00000020541	CSTF2	100	75.209	ENSMEUG00000007875	-	100	76.549	Notamacropus_eugenii
ENSPPYG00000020541	CSTF2	91	76.740	ENSMEUG00000014025	-	100	78.205	Notamacropus_eugenii
ENSPPYG00000020541	CSTF2	84	80.995	ENSOPRG00000003106	CSTF2	87	80.995	Ochotona_princeps
ENSPPYG00000020541	CSTF2	100	92.462	ENSODEG00000002059	CSTF2	100	92.462	Octodon_degus
ENSPPYG00000020541	CSTF2	99	55.781	ENSONIG00000002631	cstf2	99	57.321	Oreochromis_niloticus
ENSPPYG00000020541	CSTF2	87	98.214	ENSOANG00000004208	CSTF2	87	90.000	Ornithorhynchus_anatinus
ENSPPYG00000020541	CSTF2	100	91.960	ENSOCUG00000010468	CSTF2	100	91.960	Oryctolagus_cuniculus
ENSPPYG00000020541	CSTF2	83	80.498	ENSORLG00000001380	cstf2	97	57.190	Oryzias_latipes
ENSPPYG00000020541	CSTF2	83	80.913	ENSORLG00020021917	cstf2	97	57.521	Oryzias_latipes_hni
ENSPPYG00000020541	CSTF2	83	80.498	ENSORLG00015011996	cstf2	97	57.190	Oryzias_latipes_hsok
ENSPPYG00000020541	CSTF2	83	81.328	ENSOMEG00000015507	cstf2	97	59.136	Oryzias_melastigma
ENSPPYG00000020541	CSTF2	100	91.415	ENSOGAG00000011192	CSTF2	100	90.302	Otolemur_garnettii
ENSPPYG00000020541	CSTF2	100	95.159	ENSOARG00000001022	CSTF2	100	95.159	Ovis_aries
ENSPPYG00000020541	CSTF2	100	99.832	ENSPPAG00000031804	CSTF2	100	99.832	Pan_paniscus
ENSPPYG00000020541	CSTF2	100	97.152	ENSPPRG00000022492	CSTF2	100	97.152	Panthera_pardus
ENSPPYG00000020541	CSTF2	100	96.817	ENSPTIG00000009922	CSTF2	100	96.817	Panthera_tigris_altaica
ENSPPYG00000020541	CSTF2	100	99.832	ENSPTRG00000022090	CSTF2	100	99.832	Pan_troglodytes
ENSPPYG00000020541	CSTF2	100	99.832	ENSPANG00000002303	CSTF2	100	99.832	Papio_anubis
ENSPPYG00000020541	CSTF2	99	63.193	ENSPKIG00000005033	cstf2	93	64.120	Paramormyrops_kingsleyae
ENSPPYG00000020541	CSTF2	99	58.054	ENSPMGG00000006534	cstf2	97	58.756	Periophthalmus_magnuspinnatus
ENSPPYG00000020541	CSTF2	100	89.000	ENSPEMG00000019415	Cstf2	100	89.000	Peromyscus_maniculatus_bairdii
ENSPPYG00000020541	CSTF2	100	80.952	ENSPCIG00000002989	CSTF2	100	82.594	Phascolarctos_cinereus
ENSPPYG00000020541	CSTF2	59	67.606	ENSPREG00000011481	cstf2	97	59.539	Poecilia_reticulata
ENSPPYG00000020541	CSTF2	100	97.655	ENSPCOG00000027744	CSTF2	100	97.655	Propithecus_coquereli
ENSPPYG00000020541	CSTF2	97	78.163	ENSPVAG00000008342	CSTF2	100	78.163	Pteropus_vampyrus
ENSPPYG00000020541	CSTF2	99	60.702	ENSPNAG00000018887	cstf2	97	61.706	Pygocentrus_nattereri
ENSPPYG00000020541	CSTF2	100	89.500	ENSRNOG00000048025	Cstf2	99	92.366	Rattus_norvegicus
ENSPPYG00000020541	CSTF2	100	94.807	ENSRBIG00000030745	CSTF2	100	94.807	Rhinopithecus_bieti
ENSPPYG00000020541	CSTF2	100	99.832	ENSRROG00000045042	CSTF2	100	99.832	Rhinopithecus_roxellana
ENSPPYG00000020541	CSTF2	100	98.995	ENSSBOG00000021649	CSTF2	100	98.995	Saimiri_boliviensis_boliviensis
ENSPPYG00000020541	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	83.133	Sarcophilus_harrisii
ENSPPYG00000020541	CSTF2	99	64.060	ENSSFOG00015006348	cstf2	98	63.471	Scleropages_formosus
ENSPPYG00000020541	CSTF2	99	56.830	ENSSMAG00000013463	cstf2	97	58.155	Scophthalmus_maximus
ENSPPYG00000020541	CSTF2	100	65.179	ENSSPUG00000005288	-	97	77.236	Sphenodon_punctatus
ENSPPYG00000020541	CSTF2	100	95.812	ENSSSCG00000012486	CSTF2	100	97.306	Sus_scrofa
ENSPPYG00000020541	CSTF2	100	76.645	ENSTGUG00000002253	CSTF2	100	76.809	Taeniopygia_guttata
ENSPPYG00000020541	CSTF2	99	57.401	ENSTNIG00000016860	cstf2	99	58.059	Tetraodon_nigroviridis
ENSPPYG00000020541	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSPPYG00000020541	CSTF2	100	93.802	ENSTTRG00000013556	CSTF2	100	93.802	Tursiops_truncatus
ENSPPYG00000020541	CSTF2	100	96.512	ENSUAMG00000026605	CSTF2	100	96.512	Ursus_americanus
ENSPPYG00000020541	CSTF2	100	89.447	ENSUMAG00000012417	CSTF2	100	98.616	Ursus_maritimus
ENSPPYG00000020541	CSTF2	74	91.185	ENSVPAG00000006466	CSTF2	72	91.185	Vicugna_pacos
ENSPPYG00000020541	CSTF2	100	93.467	ENSVVUG00000004717	CSTF2	100	93.467	Vulpes_vulpes
ENSPPYG00000020541	CSTF2	82	92.188	ENSXETG00000009642	cstf2	100	63.967	Xenopus_tropicalis
ENSPPYG00000020541	CSTF2	88	76.829	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus