EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPPYG00000020703 (Gene tree)
Gene ID: -
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Minus strand
Length: 77512 bases
Position: chrX:128847472-128924983
Accession: 11097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000023174	ResIII	PF04851.15	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000024145	SMARCA1-201	4056	-	ENSPPYP00000023174	1055 (aa)	-	H2PWQ2

Gene Model

Click here to download ENSPPYG00000020703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000020703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPPYG00000020703	SMARCA1	53	41.053	ENSPPYG00000000946	CHD1L	61	41.053
ENSPPYG00000020703	SMARCA1	93	82.305	ENSPPYG00000015091	SMARCA5	94	82.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000020703	SMARCA1	100	97.259	ENSG00000102038	SMARCA1	100	97.259	Homo_sapiens
ENSPPYG00000020703	SMARCA1	92	80.840	ENSAPOG00000016035	smarca5	98	80.963	Acanthochromis_polyacanthus
ENSPPYG00000020703	SMARCA1	100	94.112	ENSAMEG00000015218	SMARCA1	100	94.112	Ailuropoda_melanoleuca
ENSPPYG00000020703	SMARCA1	85	80.952	ENSACIG00000016982	smarca5	99	81.027	Amphilophus_citrinellus
ENSPPYG00000020703	SMARCA1	92	80.840	ENSAOCG00000015578	smarca5	95	79.940	Amphiprion_ocellaris
ENSPPYG00000020703	SMARCA1	92	80.840	ENSAPEG00000011117	smarca5	99	80.778	Amphiprion_percula
ENSPPYG00000020703	SMARCA1	93	80.448	ENSATEG00000012894	smarca5	94	80.809	Anabas_testudineus
ENSPPYG00000020703	SMARCA1	93	90.428	ENSAPLG00000013149	SMARCA1	100	90.428	Anas_platyrhynchos
ENSPPYG00000020703	SMARCA1	97	86.893	ENSACAG00000011376	SMARCA1	95	88.689	Anolis_carolinensis
ENSPPYG00000020703	SMARCA1	100	92.060	ENSANAG00000023098	SMARCA1	100	92.060	Aotus_nancymaae
ENSPPYG00000020703	SMARCA1	96	78.410	ENSACLG00000025356	smarca5	95	80.202	Astatotilapia_calliptera
ENSPPYG00000020703	SMARCA1	88	85.591	ENSAMXG00000011227	smarca1	99	86.909	Astyanax_mexicanus
ENSPPYG00000020703	SMARCA1	98	78.046	ENSAMXG00000005709	smarca5	94	81.128	Astyanax_mexicanus
ENSPPYG00000020703	SMARCA1	99	94.145	ENSBTAG00000002292	SMARCA1	99	93.714	Bos_taurus
ENSPPYG00000020703	SMARCA1	93	61.049	WBGene00002169	isw-1	97	61.049	Caenorhabditis_elegans
ENSPPYG00000020703	SMARCA1	100	96.975	ENSCJAG00000002868	SMARCA1	100	96.975	Callithrix_jacchus
ENSPPYG00000020703	SMARCA1	100	85.953	ENSCAFG00000018673	SMARCA1	99	85.412	Canis_familiaris
ENSPPYG00000020703	SMARCA1	100	95.936	ENSCAFG00020001751	SMARCA1	98	96.146	Canis_lupus_dingo
ENSPPYG00000020703	SMARCA1	100	94.251	ENSCHIG00000009837	SMARCA1	100	93.573	Capra_hircus
ENSPPYG00000020703	SMARCA1	95	96.000	ENSTSYG00000004240	SMARCA1	98	95.408	Carlito_syrichta
ENSPPYG00000020703	SMARCA1	96	94.158	ENSCPOG00000013601	SMARCA1	95	94.428	Cavia_porcellus
ENSPPYG00000020703	SMARCA1	100	94.045	ENSCCAG00000030817	SMARCA1	100	94.045	Cebus_capucinus
ENSPPYG00000020703	SMARCA1	100	96.168	ENSCATG00000015921	SMARCA1	99	97.198	Cercocebus_atys
ENSPPYG00000020703	SMARCA1	98	94.412	ENSCLAG00000002171	SMARCA1	98	94.412	Chinchilla_lanigera
ENSPPYG00000020703	SMARCA1	100	97.164	ENSCSAG00000008460	SMARCA1	100	97.164	Chlorocebus_sabaeus
ENSPPYG00000020703	SMARCA1	95	89.910	ENSCPBG00000001146	SMARCA1	94	89.990	Chrysemys_picta_bellii
ENSPPYG00000020703	SMARCA1	92	71.136	ENSCING00000004110	swi/snf	97	71.136	Ciona_intestinalis
ENSPPYG00000020703	SMARCA1	92	70.427	ENSCSAVG00000004620	-	100	71.269	Ciona_savignyi
ENSPPYG00000020703	SMARCA1	100	97.164	ENSCANG00000007183	SMARCA1	100	97.164	Colobus_angolensis_palliatus
ENSPPYG00000020703	SMARCA1	100	93.201	ENSCGRG00001010776	Smarca1	98	93.551	Cricetulus_griseus_chok1gshd
ENSPPYG00000020703	SMARCA1	93	92.611	ENSCGRG00000015301	Smarca1	98	93.068	Cricetulus_griseus_crigri
ENSPPYG00000020703	SMARCA1	92	80.840	ENSCSEG00000000328	smarca5	95	80.283	Cynoglossus_semilaevis
ENSPPYG00000020703	SMARCA1	93	80.244	ENSCVAG00000008668	smarca5	99	80.330	Cyprinodon_variegatus
ENSPPYG00000020703	SMARCA1	93	82.708	ENSDARG00000012776	smarca1	97	82.708	Danio_rerio
ENSPPYG00000020703	SMARCA1	93	79.899	ENSDARG00000052348	smarca5	95	79.899	Danio_rerio
ENSPPYG00000020703	SMARCA1	96	93.399	ENSDNOG00000004315	SMARCA1	98	93.399	Dasypus_novemcinctus
ENSPPYG00000020703	SMARCA1	98	93.623	ENSDORG00000009270	Smarca1	97	93.596	Dipodomys_ordii
ENSPPYG00000020703	SMARCA1	92	70.317	FBgn0011604	Iswi	98	69.634	Drosophila_melanogaster
ENSPPYG00000020703	SMARCA1	77	93.578	ENSETEG00000017426	SMARCA1	85	93.578	Echinops_telfairi
ENSPPYG00000020703	SMARCA1	93	77.937	ENSEBUG00000001239	smarca5	96	77.937	Eptatretus_burgeri
ENSPPYG00000020703	SMARCA1	96	88.846	ENSEASG00005008218	SMARCA1	100	90.404	Equus_asinus_asinus
ENSPPYG00000020703	SMARCA1	100	94.628	ENSECAG00000012106	SMARCA1	98	95.005	Equus_caballus
ENSPPYG00000020703	SMARCA1	75	88.079	ENSEEUG00000014927	SMARCA1	82	88.079	Erinaceus_europaeus
ENSPPYG00000020703	SMARCA1	94	83.848	ENSELUG00000010515	smarca1	98	83.848	Esox_lucius
ENSPPYG00000020703	SMARCA1	100	94.860	ENSFCAG00000018496	SMARCA1	100	94.860	Felis_catus
ENSPPYG00000020703	SMARCA1	86	90.471	ENSFALG00000000209	SMARCA1	98	90.570	Ficedula_albicollis
ENSPPYG00000020703	SMARCA1	93	93.946	ENSFDAG00000009818	SMARCA1	97	93.946	Fukomys_damarensis
ENSPPYG00000020703	SMARCA1	99	76.431	ENSFHEG00000007687	smarca5	94	80.000	Fundulus_heteroclitus
ENSPPYG00000020703	SMARCA1	94	88.218	ENSGALG00000008431	SMARCA1	96	90.144	Gallus_gallus
ENSPPYG00000020703	SMARCA1	93	80.652	ENSGAFG00000017731	smarca5	95	80.000	Gambusia_affinis
ENSPPYG00000020703	SMARCA1	92	90.638	ENSGAGG00000023575	SMARCA1	100	90.638	Gopherus_agassizii
ENSPPYG00000020703	SMARCA1	69	96.000	ENSGGOG00000012841	-	95	96.000	Gorilla_gorilla
ENSPPYG00000020703	SMARCA1	98	94.316	ENSHGLG00000003080	SMARCA1	98	94.316	Heterocephalus_glaber_female
ENSPPYG00000020703	SMARCA1	94	93.906	ENSHGLG00100001102	SMARCA1	100	93.906	Heterocephalus_glaber_male
ENSPPYG00000020703	SMARCA1	92	80.675	ENSHCOG00000005458	smarca5	95	79.899	Hippocampus_comes
ENSPPYG00000020703	SMARCA1	96	78.360	ENSIPUG00000005229	SMARCA5	97	79.817	Ictalurus_punctatus
ENSPPYG00000020703	SMARCA1	95	82.475	ENSIPUG00000016905	Smarca1	99	84.168	Ictalurus_punctatus
ENSPPYG00000020703	SMARCA1	98	95.665	ENSSTOG00000014524	SMARCA1	98	95.665	Ictidomys_tridecemlineatus
ENSPPYG00000020703	SMARCA1	98	93.480	ENSJJAG00000002593	Smarca1	98	93.384	Jaculus_jaculus
ENSPPYG00000020703	SMARCA1	92	80.879	ENSKMAG00000003777	smarca5	95	80.101	Kryptolebias_marmoratus
ENSPPYG00000020703	SMARCA1	93	79.798	ENSLBEG00000018112	smarca5	95	79.798	Labrus_bergylta
ENSPPYG00000020703	SMARCA1	88	80.881	ENSLBEG00000013295	SMARCA1	100	81.290	Labrus_bergylta
ENSPPYG00000020703	SMARCA1	96	86.391	ENSLACG00000016697	SMARCA1	98	87.287	Latimeria_chalumnae
ENSPPYG00000020703	SMARCA1	94	86.145	ENSLOCG00000014591	smarca1	97	86.145	Lepisosteus_oculatus
ENSPPYG00000020703	SMARCA1	95	93.837	ENSLAFG00000000896	SMARCA1	99	93.831	Loxodonta_africana
ENSPPYG00000020703	SMARCA1	100	97.259	ENSMFAG00000002117	SMARCA1	99	97.198	Macaca_fascicularis
ENSPPYG00000020703	SMARCA1	100	96.168	ENSMMUG00000008818	SMARCA1	99	97.198	Macaca_mulatta
ENSPPYG00000020703	SMARCA1	100	96.168	ENSMNEG00000041768	SMARCA1	99	97.198	Macaca_nemestrina
ENSPPYG00000020703	SMARCA1	100	97.164	ENSMLEG00000043198	SMARCA1	100	97.164	Mandrillus_leucophaeus
ENSPPYG00000020703	SMARCA1	93	80.855	ENSMAMG00000014294	smarca5	96	79.780	Mastacembelus_armatus
ENSPPYG00000020703	SMARCA1	96	78.410	ENSMZEG00005009369	smarca5	95	80.202	Maylandia_zebra
ENSPPYG00000020703	SMARCA1	95	88.473	ENSMGAG00000007042	SMARCA1	99	88.625	Meleagris_gallopavo
ENSPPYG00000020703	SMARCA1	98	93.077	ENSMAUG00000008133	Smarca1	97	93.431	Mesocricetus_auratus
ENSPPYG00000020703	SMARCA1	100	94.486	ENSMICG00000015768	SMARCA1	100	94.486	Microcebus_murinus
ENSPPYG00000020703	SMARCA1	100	92.944	ENSMOCG00000009464	Smarca1	98	93.289	Microtus_ochrogaster
ENSPPYG00000020703	SMARCA1	93	78.406	ENSMMOG00000005547	smarca5	99	78.406	Mola_mola
ENSPPYG00000020703	SMARCA1	98	86.847	ENSMODG00000013187	-	99	86.834	Monodelphis_domestica
ENSPPYG00000020703	SMARCA1	92	80.470	ENSMALG00000002081	smarca5	97	80.041	Monopterus_albus
ENSPPYG00000020703	SMARCA1	100	93.133	MGP_CAROLIEiJ_G0033034	Smarca1	98	93.384	Mus_caroli
ENSPPYG00000020703	SMARCA1	100	93.133	ENSMUSG00000031099	Smarca1	98	93.384	Mus_musculus
ENSPPYG00000020703	SMARCA1	100	93.227	MGP_PahariEiJ_G0031579	Smarca1	98	93.384	Mus_pahari
ENSPPYG00000020703	SMARCA1	100	93.227	MGP_SPRETEiJ_G0034192	Smarca1	98	93.480	Mus_spretus
ENSPPYG00000020703	SMARCA1	100	94.486	ENSMPUG00000017423	SMARCA1	95	94.486	Mustela_putorius_furo
ENSPPYG00000020703	SMARCA1	100	91.698	ENSMLUG00000029614	SMARCA1	100	91.138	Myotis_lucifugus
ENSPPYG00000020703	SMARCA1	98	93.219	ENSNGAG00000006492	Smarca1	99	93.219	Nannospalax_galili
ENSPPYG00000020703	SMARCA1	93	80.957	ENSNBRG00000004463	smarca5	99	80.303	Neolamprologus_brichardi
ENSPPYG00000020703	SMARCA1	100	95.327	ENSNLEG00000015179	SMARCA1	100	95.327	Nomascus_leucogenys
ENSPPYG00000020703	SMARCA1	89	79.097	ENSMEUG00000008819	SMARCA1	99	79.075	Notamacropus_eugenii
ENSPPYG00000020703	SMARCA1	96	92.697	ENSODEG00000012163	SMARCA1	97	92.502	Octodon_degus
ENSPPYG00000020703	SMARCA1	96	78.508	ENSONIG00000009993	smarca5	95	80.303	Oreochromis_niloticus
ENSPPYG00000020703	SMARCA1	92	90.947	ENSOANG00000002862	SMARCA1	100	90.947	Ornithorhynchus_anatinus
ENSPPYG00000020703	SMARCA1	98	92.891	ENSOCUG00000001047	SMARCA1	98	92.582	Oryctolagus_cuniculus
ENSPPYG00000020703	SMARCA1	92	80.777	ENSORLG00000021998	smarca5	95	80.000	Oryzias_latipes
ENSPPYG00000020703	SMARCA1	92	80.879	ENSORLG00020017679	smarca5	95	80.101	Oryzias_latipes_hni
ENSPPYG00000020703	SMARCA1	92	80.777	ENSORLG00015017210	smarca5	95	79.899	Oryzias_latipes_hsok
ENSPPYG00000020703	SMARCA1	92	80.777	ENSOMEG00000000086	smarca5	95	79.899	Oryzias_melastigma
ENSPPYG00000020703	SMARCA1	98	94.556	ENSOGAG00000004399	SMARCA1	99	94.556	Otolemur_garnettii
ENSPPYG00000020703	SMARCA1	95	94.571	ENSOARG00000014638	SMARCA1	100	96.020	Ovis_aries
ENSPPYG00000020703	SMARCA1	100	97.259	ENSPPAG00000034647	SMARCA1	100	97.259	Pan_paniscus
ENSPPYG00000020703	SMARCA1	100	94.860	ENSPPRG00000008929	SMARCA1	100	94.860	Panthera_pardus
ENSPPYG00000020703	SMARCA1	95	94.002	ENSPTIG00000000915	SMARCA1	98	94.002	Panthera_tigris_altaica
ENSPPYG00000020703	SMARCA1	100	97.259	ENSPTRG00000049876	SMARCA1	99	97.198	Pan_troglodytes
ENSPPYG00000020703	SMARCA1	100	97.259	ENSPANG00000003871	SMARCA1	100	97.259	Papio_anubis
ENSPPYG00000020703	SMARCA1	89	84.461	ENSPKIG00000013411	smarca1	98	84.320	Paramormyrops_kingsleyae
ENSPPYG00000020703	SMARCA1	95	88.648	ENSPSIG00000010101	SMARCA1	100	90.329	Pelodiscus_sinensis
ENSPPYG00000020703	SMARCA1	98	93.750	ENSPEMG00000017503	Smarca1	99	93.123	Peromyscus_maniculatus_bairdii
ENSPPYG00000020703	SMARCA1	95	89.311	ENSPCIG00000015460	SMARCA1	98	89.389	Phascolarctos_cinereus
ENSPPYG00000020703	SMARCA1	92	80.879	ENSPFOG00000007649	smarca5	95	80.000	Poecilia_formosa
ENSPPYG00000020703	SMARCA1	92	80.879	ENSPLAG00000003363	smarca5	95	80.000	Poecilia_latipinna
ENSPPYG00000020703	SMARCA1	92	80.777	ENSPMEG00000019849	smarca5	95	79.899	Poecilia_mexicana
ENSPPYG00000020703	SMARCA1	92	80.777	ENSPREG00000023250	smarca5	95	79.899	Poecilia_reticulata
ENSPPYG00000020703	SMARCA1	76	89.189	ENSPCOG00000020722	SMARCA1	94	89.280	Propithecus_coquereli
ENSPPYG00000020703	SMARCA1	92	92.278	ENSPVAG00000003805	SMARCA1	94	92.278	Pteropus_vampyrus
ENSPPYG00000020703	SMARCA1	55	80.717	ENSPNYG00000012299	smarca5	92	80.717	Pundamilia_nyererei
ENSPPYG00000020703	SMARCA1	100	93.667	ENSRNOG00000003762	Smarca1	98	93.834	Rattus_norvegicus
ENSPPYG00000020703	SMARCA1	100	97.164	ENSRROG00000034167	SMARCA1	100	97.164	Rhinopithecus_roxellana
ENSPPYG00000020703	SMARCA1	96	94.385	ENSSBOG00000020641	SMARCA1	100	96.837	Saimiri_boliviensis_boliviensis
ENSPPYG00000020703	SMARCA1	92	83.864	ENSSHAG00000013518	SMARCA1	99	83.864	Sarcophilus_harrisii
ENSPPYG00000020703	SMARCA1	98	82.705	ENSSFOG00015009043	smarca1	98	84.970	Scleropages_formosus
ENSPPYG00000020703	SMARCA1	95	79.362	ENSSFOG00015016794	smarca5	100	80.928	Scleropages_formosus
ENSPPYG00000020703	SMARCA1	93	79.534	ENSSMAG00000004801	smarca5	95	79.534	Scophthalmus_maximus
ENSPPYG00000020703	SMARCA1	93	80.346	ENSSDUG00000020690	smarca5	96	79.697	Seriola_dumerili
ENSPPYG00000020703	SMARCA1	93	80.346	ENSSLDG00000025190	smarca5	96	79.697	Seriola_lalandi_dorsalis
ENSPPYG00000020703	SMARCA1	85	88.257	ENSSARG00000000842	SMARCA1	92	88.257	Sorex_araneus
ENSPPYG00000020703	SMARCA1	92	89.253	ENSSPUG00000000590	SMARCA1	94	89.231	Sphenodon_punctatus
ENSPPYG00000020703	SMARCA1	93	80.448	ENSSPAG00000002894	smarca5	97	80.963	Stegastes_partitus
ENSPPYG00000020703	SMARCA1	98	92.389	ENSSSCG00000012649	SMARCA1	98	94.597	Sus_scrofa
ENSPPYG00000020703	SMARCA1	93	89.919	ENSTGUG00000003899	-	100	89.919	Taeniopygia_guttata
ENSPPYG00000020703	SMARCA1	93	80.550	ENSTRUG00000014094	smarca5	95	79.899	Takifugu_rubripes
ENSPPYG00000020703	SMARCA1	92	79.713	ENSTNIG00000017717	smarca5	94	78.788	Tetraodon_nigroviridis
ENSPPYG00000020703	SMARCA1	92	87.260	ENSTBEG00000014973	SMARCA1	99	87.260	Tupaia_belangeri
ENSPPYG00000020703	SMARCA1	92	91.862	ENSTTRG00000006168	SMARCA1	99	91.862	Tursiops_truncatus
ENSPPYG00000020703	SMARCA1	100	95.369	ENSUAMG00000020201	SMARCA1	98	95.568	Ursus_americanus
ENSPPYG00000020703	SMARCA1	95	90.119	ENSUMAG00000004073	SMARCA1	99	90.109	Ursus_maritimus
ENSPPYG00000020703	SMARCA1	72	99.675	ENSVPAG00000010492	-	79	99.675	Vicugna_pacos
ENSPPYG00000020703	SMARCA1	95	96.100	ENSVVUG00000008878	SMARCA1	99	96.096	Vulpes_vulpes
ENSPPYG00000020703	SMARCA1	94	86.533	ENSXETG00000001526	smarca1	99	86.533	Xenopus_tropicalis
ENSPPYG00000020703	SMARCA1	93	80.550	ENSXCOG00000011170	smarca5	98	79.899	Xiphophorus_couchianus
ENSPPYG00000020703	SMARCA1	93	80.550	ENSXMAG00000009678	smarca5	97	81.908	Xiphophorus_maculatus