EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPPYG00000029685 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Pongo_abelii
Status: putative
Strand: Plus strand
Length: 26088 bases
Position: chr14:93432769-93458856
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPPYP00000023779	Beta-Casp	PF10996.8	5.8e-13	1	1
ENSPPYP00000023779	RMMBL	PF07521.12	3.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPPYT00000033043	-	4194	-	ENSPPYP00000023779	496 (aa)	-	K7ETB0

Gene Model

Click here to download ENSPPYG00000029685's gene model file

Pathways

Pathway ID	Pathway Name	Source
pon03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPPYG00000029685's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPPYG00000029685	-	100	100.000	ENSG00000165934	CPSF2	99	84.013	Homo_sapiens
ENSPPYG00000029685	-	100	82.107	ENSAPOG00000001242	cpsf2	64	82.107	Acanthochromis_polyacanthus
ENSPPYG00000029685	-	69	99.707	ENSAMEG00000013790	-	100	99.707	Ailuropoda_melanoleuca
ENSPPYG00000029685	-	100	81.746	ENSACIG00000009331	cpsf2	64	81.746	Amphilophus_citrinellus
ENSPPYG00000029685	-	100	82.306	ENSAOCG00000014095	cpsf2	64	82.306	Amphiprion_ocellaris
ENSPPYG00000029685	-	100	82.306	ENSAPEG00000009158	cpsf2	64	82.306	Amphiprion_percula
ENSPPYG00000029685	-	100	82.107	ENSATEG00000017644	cpsf2	84	82.107	Anabas_testudineus
ENSPPYG00000029685	-	100	94.578	ENSAPLG00000006330	CPSF2	63	94.578	Anas_platyrhynchos
ENSPPYG00000029685	-	100	93.159	ENSACAG00000009245	CPSF2	63	93.159	Anolis_carolinensis
ENSPPYG00000029685	-	100	99.597	ENSANAG00000022915	CPSF2	63	99.597	Aotus_nancymaae
ENSPPYG00000029685	-	100	81.238	ENSAMXG00000018696	cpsf2	84	81.238	Astyanax_mexicanus
ENSPPYG00000029685	-	100	99.395	ENSBTAG00000010227	CPSF2	63	99.395	Bos_taurus
ENSPPYG00000029685	-	100	33.979	WBGene00017313	cpsf-2	66	33.686	Caenorhabditis_elegans
ENSPPYG00000029685	-	100	99.597	ENSCJAG00000018069	CPSF2	63	99.597	Callithrix_jacchus
ENSPPYG00000029685	-	100	99.395	ENSCAFG00000010909	CPSF2	63	99.395	Canis_familiaris
ENSPPYG00000029685	-	100	99.395	ENSCAFG00020020670	CPSF2	70	99.395	Canis_lupus_dingo
ENSPPYG00000029685	-	100	99.395	ENSCHIG00000023848	CPSF2	63	99.395	Capra_hircus
ENSPPYG00000029685	-	100	97.782	ENSTSYG00000009036	CPSF2	63	97.782	Carlito_syrichta
ENSPPYG00000029685	-	69	99.707	ENSCAPG00000004833	-	100	99.707	Cavia_aperea
ENSPPYG00000029685	-	100	99.597	ENSCPOG00000010899	CPSF2	63	99.597	Cavia_porcellus
ENSPPYG00000029685	-	100	99.597	ENSCCAG00000028088	CPSF2	63	99.597	Cebus_capucinus
ENSPPYG00000029685	-	100	99.798	ENSCATG00000030132	CPSF2	63	99.798	Cercocebus_atys
ENSPPYG00000029685	-	100	99.395	ENSCLAG00000012404	CPSF2	63	99.395	Chinchilla_lanigera
ENSPPYG00000029685	-	100	99.798	ENSCSAG00000011300	CPSF2	63	99.798	Chlorocebus_sabaeus
ENSPPYG00000029685	-	100	88.508	ENSCHOG00000012904	CPSF2	63	88.508	Choloepus_hoffmanni
ENSPPYG00000029685	-	100	94.970	ENSCPBG00000008766	CPSF2	62	94.970	Chrysemys_picta_bellii
ENSPPYG00000029685	-	100	46.245	ENSCING00000007881	-	63	45.652	Ciona_intestinalis
ENSPPYG00000029685	-	100	99.798	ENSCANG00000041651	CPSF2	68	99.798	Colobus_angolensis_palliatus
ENSPPYG00000029685	-	100	97.782	ENSCGRG00001006901	Cpsf2	63	97.782	Cricetulus_griseus_chok1gshd
ENSPPYG00000029685	-	100	97.782	ENSCGRG00000012416	Cpsf2	63	97.782	Cricetulus_griseus_crigri
ENSPPYG00000029685	-	100	79.722	ENSCSEG00000004116	cpsf2	64	79.722	Cynoglossus_semilaevis
ENSPPYG00000029685	-	100	81.113	ENSCVAG00000000095	cpsf2	65	81.312	Cyprinodon_variegatus
ENSPPYG00000029685	-	100	80.754	ENSDARG00000028971	cpsf2	88	80.754	Danio_rerio
ENSPPYG00000029685	-	100	99.194	ENSDNOG00000042757	CPSF2	63	99.194	Dasypus_novemcinctus
ENSPPYG00000029685	-	100	99.194	ENSDORG00000013709	Cpsf2	63	99.194	Dipodomys_ordii
ENSPPYG00000029685	-	100	44.487	FBgn0027873	Cpsf100	62	44.078	Drosophila_melanogaster
ENSPPYG00000029685	-	100	88.105	ENSETEG00000012123	CPSF2	63	88.105	Echinops_telfairi
ENSPPYG00000029685	-	55	70.909	ENSEBUG00000012098	cpsf2	63	70.909	Eptatretus_burgeri
ENSPPYG00000029685	-	85	93.256	ENSEASG00005021193	CPSF2	62	93.256	Equus_asinus_asinus
ENSPPYG00000029685	-	100	99.194	ENSECAG00000023935	CPSF2	63	99.194	Equus_caballus
ENSPPYG00000029685	-	100	78.474	ENSELUG00000008442	cpsf2	64	78.474	Esox_lucius
ENSPPYG00000029685	-	100	99.395	ENSFCAG00000007886	CPSF2	63	99.395	Felis_catus
ENSPPYG00000029685	-	100	94.769	ENSFALG00000002412	CPSF2	63	94.769	Ficedula_albicollis
ENSPPYG00000029685	-	100	99.395	ENSFDAG00000006327	CPSF2	63	99.395	Fukomys_damarensis
ENSPPYG00000029685	-	97	78.819	ENSFHEG00000015465	cpsf2	62	81.002	Fundulus_heteroclitus
ENSPPYG00000029685	-	100	78.854	ENSGMOG00000008761	cpsf2	64	78.854	Gadus_morhua
ENSPPYG00000029685	-	100	94.567	ENSGALG00000010783	CPSF2	63	94.567	Gallus_gallus
ENSPPYG00000029685	-	100	81.511	ENSGAFG00000001407	cpsf2	64	81.511	Gambusia_affinis
ENSPPYG00000029685	-	100	80.119	ENSGACG00000008418	cpsf2	79	80.119	Gasterosteus_aculeatus
ENSPPYG00000029685	-	100	95.171	ENSGAGG00000008287	CPSF2	63	95.171	Gopherus_agassizii
ENSPPYG00000029685	-	100	100.000	ENSGGOG00000011799	CPSF2	63	100.000	Gorilla_gorilla
ENSPPYG00000029685	-	100	80.915	ENSHBUG00000023466	cpsf2	64	80.915	Haplochromis_burtoni
ENSPPYG00000029685	-	100	99.194	ENSHGLG00000018311	CPSF2	63	99.194	Heterocephalus_glaber_female
ENSPPYG00000029685	-	100	99.194	ENSHGLG00100016460	CPSF2	66	99.194	Heterocephalus_glaber_male
ENSPPYG00000029685	-	100	80.119	ENSHCOG00000019527	cpsf2	63	80.119	Hippocampus_comes
ENSPPYG00000029685	-	100	81.637	ENSIPUG00000020857	cpsf2	64	81.637	Ictalurus_punctatus
ENSPPYG00000029685	-	100	99.395	ENSSTOG00000009528	CPSF2	63	99.395	Ictidomys_tridecemlineatus
ENSPPYG00000029685	-	100	98.790	ENSJJAG00000017925	Cpsf2	63	98.790	Jaculus_jaculus
ENSPPYG00000029685	-	100	79.920	ENSKMAG00000019429	cpsf2	64	79.920	Kryptolebias_marmoratus
ENSPPYG00000029685	-	100	80.517	ENSLBEG00000011585	cpsf2	69	80.716	Labrus_bergylta
ENSPPYG00000029685	-	100	86.318	ENSLACG00000019024	CPSF2	63	87.525	Latimeria_chalumnae
ENSPPYG00000029685	-	100	83.865	ENSLOCG00000014102	cpsf2	64	83.865	Lepisosteus_oculatus
ENSPPYG00000029685	-	100	99.597	ENSLAFG00000004891	CPSF2	63	99.597	Loxodonta_africana
ENSPPYG00000029685	-	100	99.798	ENSMFAG00000041212	CPSF2	63	99.798	Macaca_fascicularis
ENSPPYG00000029685	-	100	99.798	ENSMMUG00000000699	CPSF2	63	99.798	Macaca_mulatta
ENSPPYG00000029685	-	100	99.798	ENSMNEG00000031584	CPSF2	63	99.798	Macaca_nemestrina
ENSPPYG00000029685	-	100	99.798	ENSMLEG00000029394	CPSF2	63	99.798	Mandrillus_leucophaeus
ENSPPYG00000029685	-	100	81.710	ENSMAMG00000004235	cpsf2	64	81.710	Mastacembelus_armatus
ENSPPYG00000029685	-	100	81.113	ENSMZEG00005001769	cpsf2	64	81.113	Maylandia_zebra
ENSPPYG00000029685	-	100	94.769	ENSMGAG00000013122	CPSF2	63	94.769	Meleagris_gallopavo
ENSPPYG00000029685	-	100	97.782	ENSMAUG00000015160	Cpsf2	63	97.782	Mesocricetus_auratus
ENSPPYG00000029685	-	100	99.597	ENSMICG00000016441	CPSF2	63	99.597	Microcebus_murinus
ENSPPYG00000029685	-	100	97.782	ENSMOCG00000015372	Cpsf2	63	97.782	Microtus_ochrogaster
ENSPPYG00000029685	-	100	74.751	ENSMMOG00000015590	cpsf2	63	74.751	Mola_mola
ENSPPYG00000029685	-	100	98.387	ENSMODG00000002042	CPSF2	63	98.387	Monodelphis_domestica
ENSPPYG00000029685	-	100	77.734	ENSMALG00000022275	cpsf2	64	77.734	Monopterus_albus
ENSPPYG00000029685	-	100	97.177	ENSMUSG00000041781	Cpsf2	63	97.177	Mus_musculus
ENSPPYG00000029685	-	100	97.581	MGP_PahariEiJ_G0029791	Cpsf2	63	97.581	Mus_pahari
ENSPPYG00000029685	-	100	97.177	MGP_SPRETEiJ_G0018877	Cpsf2	63	97.177	Mus_spretus
ENSPPYG00000029685	-	100	99.395	ENSMPUG00000007617	CPSF2	62	99.395	Mustela_putorius_furo
ENSPPYG00000029685	-	100	98.185	ENSMLUG00000005570	CPSF2	63	98.185	Myotis_lucifugus
ENSPPYG00000029685	-	100	98.589	ENSNGAG00000020312	Cpsf2	63	98.589	Nannospalax_galili
ENSPPYG00000029685	-	100	81.710	ENSNBRG00000022402	cpsf2	64	81.710	Neolamprologus_brichardi
ENSPPYG00000029685	-	100	98.589	ENSNLEG00000017132	CPSF2	63	98.589	Nomascus_leucogenys
ENSPPYG00000029685	-	86	100.000	ENSMEUG00000008138	CPSF2	55	100.000	Notamacropus_eugenii
ENSPPYG00000029685	-	100	87.702	ENSOPRG00000008484	-	68	87.702	Ochotona_princeps
ENSPPYG00000029685	-	100	99.395	ENSODEG00000008682	CPSF2	63	99.395	Octodon_degus
ENSPPYG00000029685	-	100	82.107	ENSONIG00000005901	cpsf2	64	82.107	Oreochromis_niloticus
ENSPPYG00000029685	-	100	97.984	ENSOANG00000003822	CPSF2	63	97.984	Ornithorhynchus_anatinus
ENSPPYG00000029685	-	100	98.790	ENSOCUG00000005713	CPSF2	63	98.790	Oryctolagus_cuniculus
ENSPPYG00000029685	-	100	80.716	ENSORLG00000011628	cpsf2	68	80.716	Oryzias_latipes
ENSPPYG00000029685	-	100	80.716	ENSORLG00020016980	cpsf2	64	80.716	Oryzias_latipes_hni
ENSPPYG00000029685	-	100	80.716	ENSORLG00015011910	cpsf2	64	80.716	Oryzias_latipes_hsok
ENSPPYG00000029685	-	100	79.920	ENSOMEG00000022876	cpsf2	64	79.920	Oryzias_melastigma
ENSPPYG00000029685	-	69	94.152	ENSOGAG00000008605	-	100	94.152	Otolemur_garnettii
ENSPPYG00000029685	-	100	99.395	ENSOARG00000012889	CPSF2	65	99.395	Ovis_aries
ENSPPYG00000029685	-	100	100.000	ENSPPAG00000039666	CPSF2	63	100.000	Pan_paniscus
ENSPPYG00000029685	-	100	99.395	ENSPPRG00000010869	CPSF2	64	99.395	Panthera_pardus
ENSPPYG00000029685	-	100	99.395	ENSPTIG00000021202	CPSF2	63	99.395	Panthera_tigris_altaica
ENSPPYG00000029685	-	100	100.000	ENSPTRG00000006651	CPSF2	63	100.000	Pan_troglodytes
ENSPPYG00000029685	-	100	99.798	ENSPANG00000017417	CPSF2	63	99.798	Papio_anubis
ENSPPYG00000029685	-	100	82.435	ENSPKIG00000021453	cpsf2	68	82.435	Paramormyrops_kingsleyae
ENSPPYG00000029685	-	100	94.366	ENSPSIG00000006289	CPSF2	63	94.366	Pelodiscus_sinensis
ENSPPYG00000029685	-	100	76.680	ENSPMGG00000002511	cpsf2	84	76.877	Periophthalmus_magnuspinnatus
ENSPPYG00000029685	-	100	98.185	ENSPEMG00000007917	Cpsf2	63	98.185	Peromyscus_maniculatus_bairdii
ENSPPYG00000029685	-	100	66.337	ENSPMAG00000006205	cpsf2	64	66.337	Petromyzon_marinus
ENSPPYG00000029685	-	100	98.387	ENSPCIG00000011393	CPSF2	63	98.387	Phascolarctos_cinereus
ENSPPYG00000029685	-	100	81.312	ENSPFOG00000018648	cpsf2	64	81.312	Poecilia_formosa
ENSPPYG00000029685	-	100	81.312	ENSPLAG00000019199	cpsf2	63	81.312	Poecilia_latipinna
ENSPPYG00000029685	-	100	81.511	ENSPMEG00000012100	cpsf2	67	81.511	Poecilia_mexicana
ENSPPYG00000029685	-	100	81.113	ENSPREG00000008960	cpsf2	64	81.113	Poecilia_reticulata
ENSPPYG00000029685	-	100	99.194	ENSPCAG00000012477	CPSF2	63	99.194	Procavia_capensis
ENSPPYG00000029685	-	100	99.597	ENSPCOG00000026387	CPSF2	99	99.338	Propithecus_coquereli
ENSPPYG00000029685	-	100	81.151	ENSPNYG00000023356	cpsf2	64	81.151	Pundamilia_nyererei
ENSPPYG00000029685	-	100	82.635	ENSPNAG00000001849	cpsf2	64	82.635	Pygocentrus_nattereri
ENSPPYG00000029685	-	100	97.782	ENSRNOG00000005733	Cpsf2	63	97.782	Rattus_norvegicus
ENSPPYG00000029685	-	100	99.798	ENSRBIG00000044792	CPSF2	63	99.798	Rhinopithecus_bieti
ENSPPYG00000029685	-	100	99.798	ENSRROG00000034875	CPSF2	63	99.798	Rhinopithecus_roxellana
ENSPPYG00000029685	-	100	99.597	ENSSBOG00000024571	CPSF2	63	99.597	Saimiri_boliviensis_boliviensis
ENSPPYG00000029685	-	100	98.589	ENSSHAG00000010458	CPSF2	63	98.589	Sarcophilus_harrisii
ENSPPYG00000029685	-	100	83.832	ENSSFOG00015002117	cpsf2	64	83.832	Scleropages_formosus
ENSPPYG00000029685	-	100	79.125	ENSSMAG00000002001	cpsf2	64	79.125	Scophthalmus_maximus
ENSPPYG00000029685	-	100	82.107	ENSSDUG00000004084	cpsf2	64	82.107	Seriola_dumerili
ENSPPYG00000029685	-	100	81.511	ENSSLDG00000024330	cpsf2	64	81.511	Seriola_lalandi_dorsalis
ENSPPYG00000029685	-	100	94.366	ENSSPUG00000013485	CPSF2	63	94.366	Sphenodon_punctatus
ENSPPYG00000029685	-	100	81.312	ENSSPAG00000013284	cpsf2	64	81.312	Stegastes_partitus
ENSPPYG00000029685	-	100	99.395	ENSSSCG00000002447	CPSF2	63	99.395	Sus_scrofa
ENSPPYG00000029685	-	61	94.059	ENSTGUG00000016355	-	100	94.059	Taeniopygia_guttata
ENSPPYG00000029685	-	100	94.970	ENSTGUG00000012571	-	63	94.970	Taeniopygia_guttata
ENSPPYG00000029685	-	100	80.517	ENSTRUG00000003742	cpsf2	68	80.517	Takifugu_rubripes
ENSPPYG00000029685	-	100	80.000	ENSTNIG00000012228	cpsf2	64	80.000	Tetraodon_nigroviridis
ENSPPYG00000029685	-	86	100.000	ENSTBEG00000004530	CPSF2	56	100.000	Tupaia_belangeri
ENSPPYG00000029685	-	100	97.984	ENSTTRG00000008697	CPSF2	63	97.984	Tursiops_truncatus
ENSPPYG00000029685	-	100	99.597	ENSUAMG00000028071	CPSF2	63	99.597	Ursus_americanus
ENSPPYG00000029685	-	100	99.597	ENSUMAG00000005029	CPSF2	63	99.597	Ursus_maritimus
ENSPPYG00000029685	-	99	99.596	ENSVPAG00000003503	CPSF2	63	99.596	Vicugna_pacos
ENSPPYG00000029685	-	100	99.395	ENSVVUG00000024642	CPSF2	63	99.395	Vulpes_vulpes
ENSPPYG00000029685	-	100	90.744	ENSXETG00000010289	cpsf2	63	90.744	Xenopus_tropicalis
ENSPPYG00000029685	-	100	81.909	ENSXCOG00000001764	cpsf2	64	81.909	Xiphophorus_couchianus
ENSPPYG00000029685	-	100	82.107	ENSXMAG00000017048	cpsf2	64	82.107	Xiphophorus_maculatus