EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000097 (Gene tree)
Gene ID: 103461647
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 14048 bases
Position: chrLG1:2516911-2530958
Accession: 103461647
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000092	FRG1	PF06229.12	3.1e-79	1	1
ENSPREP00000000091	FRG1	PF06229.12	4.7e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000000116	-	5006	XM_008403934	ENSPREP00000000092	255 (aa)	XP_008402156	UPI0004A4741F
ENSPRET00000000115	-	5709	-	ENSPREP00000000091	267 (aa)	-	-

Gene Model

Click here to download ENSPREG00000000097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000097's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000097	frg1	100	67.054	ENSG00000109536	FRG1	100	76.724	Homo_sapiens
ENSPREG00000000097	frg1	100	82.353	ENSAPOG00000001060	frg1	100	85.098	Acanthochromis_polyacanthus
ENSPREG00000000097	frg1	100	67.442	ENSAMEG00000013503	FRG1	100	70.155	Ailuropoda_melanoleuca
ENSPREG00000000097	frg1	87	86.937	ENSACIG00000022283	frg1	100	86.937	Amphilophus_citrinellus
ENSPREG00000000097	frg1	87	85.202	ENSAOCG00000024240	frg1	87	85.202	Amphiprion_ocellaris
ENSPREG00000000097	frg1	100	83.137	ENSAPEG00000002486	frg1	100	85.882	Amphiprion_percula
ENSPREG00000000097	frg1	100	86.275	ENSATEG00000010414	frg1	100	86.275	Anabas_testudineus
ENSPREG00000000097	frg1	100	70.703	ENSAPLG00000007785	-	100	70.703	Anas_platyrhynchos
ENSPREG00000000097	frg1	100	71.094	ENSACAG00000006877	-	100	71.094	Anolis_carolinensis
ENSPREG00000000097	frg1	100	68.872	ENSANAG00000020876	FRG1	100	68.872	Aotus_nancymaae
ENSPREG00000000097	frg1	100	80.000	ENSACLG00000027065	frg1	100	79.608	Astatotilapia_calliptera
ENSPREG00000000097	frg1	100	82.422	ENSAMXG00000032700	frg1	100	82.422	Astyanax_mexicanus
ENSPREG00000000097	frg1	100	67.442	ENSBTAG00000007089	FRG1	100	70.155	Bos_taurus
ENSPREG00000000097	frg1	83	40.529	WBGene00014177	frg-1	95	38.550	Caenorhabditis_elegans
ENSPREG00000000097	frg1	100	68.872	ENSCJAG00000011272	FRG1	100	68.872	Callithrix_jacchus
ENSPREG00000000097	frg1	100	67.442	ENSCAFG00000007135	FRG1	100	70.155	Canis_familiaris
ENSPREG00000000097	frg1	83	71.226	ENSCAFG00020000082	-	85	71.226	Canis_lupus_dingo
ENSPREG00000000097	frg1	100	67.442	ENSCHIG00000011585	-	100	66.667	Capra_hircus
ENSPREG00000000097	frg1	98	49.206	ENSTSYG00000031599	-	100	48.413	Carlito_syrichta
ENSPREG00000000097	frg1	89	69.737	ENSCAPG00000016056	-	92	69.912	Cavia_aperea
ENSPREG00000000097	frg1	100	70.039	ENSCPOG00000022277	-	100	70.039	Cavia_porcellus
ENSPREG00000000097	frg1	100	68.872	ENSCCAG00000024627	FRG1	100	68.872	Cebus_capucinus
ENSPREG00000000097	frg1	100	67.442	ENSCATG00000029230	FRG1	100	70.543	Cercocebus_atys
ENSPREG00000000097	frg1	100	55.426	ENSCLAG00000004960	-	99	58.000	Chinchilla_lanigera
ENSPREG00000000097	frg1	100	49.412	ENSCLAG00000006068	-	100	49.412	Chinchilla_lanigera
ENSPREG00000000097	frg1	100	70.039	ENSCLAG00000000370	-	100	70.039	Chinchilla_lanigera
ENSPREG00000000097	frg1	99	49.802	ENSCLAG00000009263	-	100	49.802	Chinchilla_lanigera
ENSPREG00000000097	frg1	100	67.442	ENSCSAG00000002899	FRG1	100	70.543	Chlorocebus_sabaeus
ENSPREG00000000097	frg1	84	67.130	ENSCSAG00000017729	-	100	67.130	Chlorocebus_sabaeus
ENSPREG00000000097	frg1	87	72.973	ENSCPBG00000009211	-	86	72.973	Chrysemys_picta_bellii
ENSPREG00000000097	frg1	99	46.442	ENSCING00000005161	-	99	46.816	Ciona_intestinalis
ENSPREG00000000097	frg1	51	53.435	ENSCSAVG00000008018	-	100	48.087	Ciona_savignyi
ENSPREG00000000097	frg1	100	67.442	ENSCANG00000020991	FRG1	100	70.543	Colobus_angolensis_palliatus
ENSPREG00000000097	frg1	100	67.442	ENSCGRG00001014998	Frg1	100	70.543	Cricetulus_griseus_chok1gshd
ENSPREG00000000097	frg1	100	56.031	ENSCGRG00000003902	-	96	56.031	Cricetulus_griseus_crigri
ENSPREG00000000097	frg1	100	67.442	ENSCGRG00000011860	-	100	70.543	Cricetulus_griseus_crigri
ENSPREG00000000097	frg1	96	80.328	ENSCSEG00000015950	frg1	100	80.328	Cynoglossus_semilaevis
ENSPREG00000000097	frg1	100	90.196	ENSCVAG00000009985	frg1	100	90.196	Cyprinodon_variegatus
ENSPREG00000000097	frg1	100	79.216	ENSDARG00000056504	frg1	100	81.690	Danio_rerio
ENSPREG00000000097	frg1	100	67.829	ENSDNOG00000014886	FRG1	100	67.829	Dasypus_novemcinctus
ENSPREG00000000097	frg1	100	60.078	ENSDORG00000016190	Frg1	100	60.465	Dipodomys_ordii
ENSPREG00000000097	frg1	100	48.289	FBgn0036964	FRG1	100	48.289	Drosophila_melanogaster
ENSPREG00000000097	frg1	100	66.279	ENSETEG00000012349	-	100	65.504	Echinops_telfairi
ENSPREG00000000097	frg1	58	53.378	ENSEBUG00000012359	FRG1	89	53.378	Eptatretus_burgeri
ENSPREG00000000097	frg1	100	68.872	ENSEASG00005017497	FRG1	100	68.872	Equus_asinus_asinus
ENSPREG00000000097	frg1	100	68.872	ENSECAG00000003122	FRG1	100	68.872	Equus_caballus
ENSPREG00000000097	frg1	62	71.338	ENSEEUG00000000145	-	100	71.338	Erinaceus_europaeus
ENSPREG00000000097	frg1	100	78.039	ENSELUG00000021712	frg1	100	78.039	Esox_lucius
ENSPREG00000000097	frg1	100	67.442	ENSFCAG00000025737	FRG1	100	70.155	Felis_catus
ENSPREG00000000097	frg1	86	72.146	ENSFALG00000011231	-	85	73.148	Ficedula_albicollis
ENSPREG00000000097	frg1	100	59.615	ENSFDAG00000012697	-	98	66.355	Fukomys_damarensis
ENSPREG00000000097	frg1	100	69.261	ENSFDAG00000000962	-	100	69.650	Fukomys_damarensis
ENSPREG00000000097	frg1	100	88.627	ENSFHEG00000010540	frg1	100	89.412	Fundulus_heteroclitus
ENSPREG00000000097	frg1	100	77.255	ENSGMOG00000000867	frg1	100	77.255	Gadus_morhua
ENSPREG00000000097	frg1	100	72.266	ENSGALG00000013590	-	100	72.266	Gallus_gallus
ENSPREG00000000097	frg1	81	96.135	ENSGAFG00000013855	frg1	100	96.135	Gambusia_affinis
ENSPREG00000000097	frg1	100	79.608	ENSGACG00000016888	frg1	100	79.608	Gasterosteus_aculeatus
ENSPREG00000000097	frg1	100	71.484	ENSGAGG00000025012	-	100	69.922	Gopherus_agassizii
ENSPREG00000000097	frg1	70	63.128	ENSGGOG00000012888	-	88	63.793	Gorilla_gorilla
ENSPREG00000000097	frg1	100	42.802	ENSGGOG00000040796	-	100	45.247	Gorilla_gorilla
ENSPREG00000000097	frg1	100	85.098	ENSHBUG00000010667	frg1	100	85.098	Haplochromis_burtoni
ENSPREG00000000097	frg1	100	70.039	ENSHGLG00000005601	FRG1	100	70.039	Heterocephalus_glaber_female
ENSPREG00000000097	frg1	99	67.188	ENSHGLG00000020402	-	94	67.188	Heterocephalus_glaber_female
ENSPREG00000000097	frg1	99	66.016	ENSHGLG00000020943	-	99	66.016	Heterocephalus_glaber_female
ENSPREG00000000097	frg1	100	58.594	ENSHGLG00000001211	-	100	59.144	Heterocephalus_glaber_female
ENSPREG00000000097	frg1	100	55.469	ENSHGLG00100015285	-	100	54.297	Heterocephalus_glaber_male
ENSPREG00000000097	frg1	100	58.984	ENSHGLG00100010674	-	100	59.533	Heterocephalus_glaber_male
ENSPREG00000000097	frg1	99	66.016	ENSHGLG00100021211	-	99	66.016	Heterocephalus_glaber_male
ENSPREG00000000097	frg1	100	70.428	ENSHGLG00100016261	-	100	70.428	Heterocephalus_glaber_male
ENSPREG00000000097	frg1	88	79.111	ENSHCOG00000000224	frg1	96	79.111	Hippocampus_comes
ENSPREG00000000097	frg1	100	78.988	ENSIPUG00000022716	frg1	100	78.599	Ictalurus_punctatus
ENSPREG00000000097	frg1	100	67.829	ENSSTOG00000002857	-	100	67.829	Ictidomys_tridecemlineatus
ENSPREG00000000097	frg1	100	67.442	ENSJJAG00000020625	Frg1	100	70.543	Jaculus_jaculus
ENSPREG00000000097	frg1	100	86.275	ENSKMAG00000005841	frg1	100	86.275	Kryptolebias_marmoratus
ENSPREG00000000097	frg1	100	83.529	ENSLBEG00000001466	frg1	100	83.529	Labrus_bergylta
ENSPREG00000000097	frg1	100	59.387	ENSLACG00000010243	frg1	100	59.387	Latimeria_chalumnae
ENSPREG00000000097	frg1	100	74.902	ENSLOCG00000013868	frg1	100	74.902	Lepisosteus_oculatus
ENSPREG00000000097	frg1	100	67.054	ENSLAFG00000011191	FRG1	100	67.054	Loxodonta_africana
ENSPREG00000000097	frg1	83	62.150	ENSMFAG00000042873	-	89	62.150	Macaca_fascicularis
ENSPREG00000000097	frg1	100	67.442	ENSMFAG00000031178	FRG1	100	70.543	Macaca_fascicularis
ENSPREG00000000097	frg1	100	67.442	ENSMMUG00000001824	FRG1	100	70.543	Macaca_mulatta
ENSPREG00000000097	frg1	78	62.069	ENSMMUG00000047496	-	87	62.069	Macaca_mulatta
ENSPREG00000000097	frg1	96	62.753	ENSMNEG00000018620	FRG1	100	65.992	Macaca_nemestrina
ENSPREG00000000097	frg1	100	67.442	ENSMLEG00000028881	FRG1	100	70.543	Mandrillus_leucophaeus
ENSPREG00000000097	frg1	100	84.314	ENSMAMG00000012406	frg1	100	84.314	Mastacembelus_armatus
ENSPREG00000000097	frg1	100	84.706	ENSMZEG00005007549	frg1	100	84.706	Maylandia_zebra
ENSPREG00000000097	frg1	100	72.266	ENSMGAG00000011481	-	100	72.266	Meleagris_gallopavo
ENSPREG00000000097	frg1	100	67.442	ENSMAUG00000000847	Frg1	100	70.543	Mesocricetus_auratus
ENSPREG00000000097	frg1	100	67.442	ENSMICG00000046816	FRG1	100	70.543	Microcebus_murinus
ENSPREG00000000097	frg1	100	61.868	ENSMOCG00000023000	Frg1	100	63.813	Microtus_ochrogaster
ENSPREG00000000097	frg1	88	82.589	ENSMMOG00000004008	frg1	95	82.589	Mola_mola
ENSPREG00000000097	frg1	100	66.279	ENSMODG00000019031	-	87	66.279	Monodelphis_domestica
ENSPREG00000000097	frg1	100	81.961	ENSMALG00000018497	frg1	100	81.961	Monopterus_albus
ENSPREG00000000097	frg1	100	67.054	MGP_CAROLIEiJ_G0031006	Frg1	100	70.155	Mus_caroli
ENSPREG00000000097	frg1	100	67.054	ENSMUSG00000031590	Frg1	100	70.155	Mus_musculus
ENSPREG00000000097	frg1	100	67.442	MGP_PahariEiJ_G0021475	Frg1	100	70.543	Mus_pahari
ENSPREG00000000097	frg1	100	66.667	MGP_SPRETEiJ_G0032120	Frg1	100	69.767	Mus_spretus
ENSPREG00000000097	frg1	100	67.442	ENSMPUG00000017962	FRG1	100	70.155	Mustela_putorius_furo
ENSPREG00000000097	frg1	100	69.261	ENSMLUG00000023179	FRG1	100	69.261	Myotis_lucifugus
ENSPREG00000000097	frg1	100	67.054	ENSNGAG00000016411	Frg1	100	70.155	Nannospalax_galili
ENSPREG00000000097	frg1	81	77.778	ENSNBRG00000006806	frg1	95	77.778	Neolamprologus_brichardi
ENSPREG00000000097	frg1	78	62.189	ENSNLEG00000028874	-	91	62.189	Nomascus_leucogenys
ENSPREG00000000097	frg1	100	68.093	ENSNLEG00000000930	FRG1	100	68.093	Nomascus_leucogenys
ENSPREG00000000097	frg1	100	59.770	ENSNLEG00000035849	-	100	59.770	Nomascus_leucogenys
ENSPREG00000000097	frg1	100	46.693	ENSNLEG00000032846	-	100	58.929	Nomascus_leucogenys
ENSPREG00000000097	frg1	100	57.364	ENSNLEG00000032333	-	100	57.364	Nomascus_leucogenys
ENSPREG00000000097	frg1	78	63.184	ENSNLEG00000036059	-	86	63.184	Nomascus_leucogenys
ENSPREG00000000097	frg1	60	69.737	ENSMEUG00000007509	-	59	69.737	Notamacropus_eugenii
ENSPREG00000000097	frg1	100	59.533	ENSOPRG00000004722	-	100	59.533	Ochotona_princeps
ENSPREG00000000097	frg1	100	70.039	ENSODEG00000006458	-	100	70.039	Octodon_degus
ENSPREG00000000097	frg1	100	51.953	ENSODEG00000006953	-	100	51.172	Octodon_degus
ENSPREG00000000097	frg1	100	85.547	ENSONIG00000010162	frg1	100	85.547	Oreochromis_niloticus
ENSPREG00000000097	frg1	74	68.085	ENSOANG00000005659	-	80	70.556	Ornithorhynchus_anatinus
ENSPREG00000000097	frg1	100	67.054	ENSOCUG00000009038	-	100	70.155	Oryctolagus_cuniculus
ENSPREG00000000097	frg1	96	81.967	ENSORLG00000008106	frg1	91	81.124	Oryzias_latipes
ENSPREG00000000097	frg1	100	82.745	ENSORLG00020014355	frg1	100	82.745	Oryzias_latipes_hni
ENSPREG00000000097	frg1	100	83.137	ENSORLG00015014159	frg1	100	83.137	Oryzias_latipes_hsok
ENSPREG00000000097	frg1	85	78.704	ENSOMEG00000002468	frg1	89	78.704	Oryzias_melastigma
ENSPREG00000000097	frg1	100	69.767	ENSOGAG00000005749	-	100	67.054	Otolemur_garnettii
ENSPREG00000000097	frg1	100	66.284	ENSOARG00000008592	FRG1	100	65.517	Ovis_aries
ENSPREG00000000097	frg1	84	66.667	ENSPPAG00000043170	-	100	68.981	Pan_paniscus
ENSPREG00000000097	frg1	96	50.000	ENSPPAG00000043174	-	100	50.000	Pan_paniscus
ENSPREG00000000097	frg1	100	67.315	ENSPPRG00000019777	-	100	67.315	Panthera_pardus
ENSPREG00000000097	frg1	100	67.054	ENSPPRG00000025003	-	100	69.767	Panthera_pardus
ENSPREG00000000097	frg1	100	67.704	ENSPTIG00000006566	-	100	67.704	Panthera_tigris_altaica
ENSPREG00000000097	frg1	100	67.054	ENSPTIG00000006588	-	100	66.279	Panthera_tigris_altaica
ENSPREG00000000097	frg1	96	55.466	ENSPTRG00000044710	-	100	55.466	Pan_troglodytes
ENSPREG00000000097	frg1	88	57.576	ENSPTRG00000043123	-	94	57.511	Pan_troglodytes
ENSPREG00000000097	frg1	96	54.251	ENSPTRG00000050204	-	100	54.251	Pan_troglodytes
ENSPREG00000000097	frg1	100	67.054	ENSPTRG00000050205	-	100	70.155	Pan_troglodytes
ENSPREG00000000097	frg1	100	67.054	ENSPTRG00000016671	-	100	70.155	Pan_troglodytes
ENSPREG00000000097	frg1	95	54.098	ENSPTRG00000052363	-	95	59.804	Pan_troglodytes
ENSPREG00000000097	frg1	69	63.333	ENSPANG00000031530	-	84	66.111	Papio_anubis
ENSPREG00000000097	frg1	100	71.094	ENSPKIG00000024189	frg1	100	71.094	Paramormyrops_kingsleyae
ENSPREG00000000097	frg1	84	73.488	ENSPSIG00000017971	-	82	73.488	Pelodiscus_sinensis
ENSPREG00000000097	frg1	98	76.984	ENSPMGG00000019273	frg1	100	76.707	Periophthalmus_magnuspinnatus
ENSPREG00000000097	frg1	100	67.442	ENSPEMG00000000650	Frg1	100	70.543	Peromyscus_maniculatus_bairdii
ENSPREG00000000097	frg1	100	68.217	ENSPCIG00000007530	-	69	68.217	Phascolarctos_cinereus
ENSPREG00000000097	frg1	100	98.431	ENSPFOG00000006721	frg1	100	98.431	Poecilia_formosa
ENSPREG00000000097	frg1	55	87.143	ENSPLAG00000005321	frg1	78	97.521	Poecilia_latipinna
ENSPREG00000000097	frg1	100	98.431	ENSPMEG00000013816	frg1	100	98.431	Poecilia_mexicana
ENSPREG00000000097	frg1	56	71.724	ENSPPYG00000029810	-	100	71.724	Pongo_abelii
ENSPREG00000000097	frg1	62	65.190	ENSPPYG00000011275	-	89	64.198	Pongo_abelii
ENSPREG00000000097	frg1	95	65.447	ENSPCAG00000014953	-	100	66.260	Procavia_capensis
ENSPREG00000000097	frg1	79	54.412	ENSPCOG00000022726	FRG1	95	58.333	Propithecus_coquereli
ENSPREG00000000097	frg1	100	53.876	ENSPVAG00000010551	FRG1	100	53.876	Pteropus_vampyrus
ENSPREG00000000097	frg1	67	87.209	ENSPNYG00000015209	frg1	74	87.209	Pundamilia_nyererei
ENSPREG00000000097	frg1	100	78.431	ENSPNAG00000013259	frg1	100	76.863	Pygocentrus_nattereri
ENSPREG00000000097	frg1	100	67.054	ENSRNOG00000009846	Frg1	100	70.155	Rattus_norvegicus
ENSPREG00000000097	frg1	89	65.502	ENSRBIG00000042219	-	96	67.686	Rhinopithecus_bieti
ENSPREG00000000097	frg1	82	64.929	ENSRROG00000032084	-	88	64.929	Rhinopithecus_roxellana
ENSPREG00000000097	frg1	100	65.504	ENSRROG00000015523	FRG1	100	64.729	Rhinopithecus_roxellana
ENSPREG00000000097	frg1	100	69.261	ENSSBOG00000034175	FRG1	100	69.261	Saimiri_boliviensis_boliviensis
ENSPREG00000000097	frg1	100	67.829	ENSSHAG00000005886	-	100	67.829	Sarcophilus_harrisii
ENSPREG00000000097	frg1	97	75.000	ENSSFOG00015021361	frg1	100	75.200	Scleropages_formosus
ENSPREG00000000097	frg1	100	80.784	ENSSMAG00000001213	frg1	100	80.784	Scophthalmus_maximus
ENSPREG00000000097	frg1	100	86.275	ENSSDUG00000018886	frg1	100	86.275	Seriola_dumerili
ENSPREG00000000097	frg1	100	85.490	ENSSLDG00000024191	frg1	100	85.490	Seriola_lalandi_dorsalis
ENSPREG00000000097	frg1	65	70.833	ENSSARG00000002471	-	93	68.966	Sorex_araneus
ENSPREG00000000097	frg1	100	69.804	ENSSPUG00000017326	-	100	69.412	Sphenodon_punctatus
ENSPREG00000000097	frg1	100	78.431	ENSSPAG00000013294	frg1	100	78.431	Stegastes_partitus
ENSPREG00000000097	frg1	100	67.442	ENSSSCG00000006996	FRG1	100	70.543	Sus_scrofa
ENSPREG00000000097	frg1	100	71.094	ENSTGUG00000007028	-	100	71.094	Taeniopygia_guttata
ENSPREG00000000097	frg1	100	81.961	ENSTRUG00000016208	frg1	100	81.961	Takifugu_rubripes
ENSPREG00000000097	frg1	100	81.569	ENSTNIG00000007128	frg1	100	81.569	Tetraodon_nigroviridis
ENSPREG00000000097	frg1	100	66.667	ENSTBEG00000014491	-	100	65.891	Tupaia_belangeri
ENSPREG00000000097	frg1	78	44.949	ENSTBEG00000017605	-	99	44.949	Tupaia_belangeri
ENSPREG00000000097	frg1	83	49.763	ENSTBEG00000012789	-	99	49.763	Tupaia_belangeri
ENSPREG00000000097	frg1	100	66.667	ENSTTRG00000003429	FRG1	100	69.767	Tursiops_truncatus
ENSPREG00000000097	frg1	96	65.447	ENSUAMG00000012123	-	100	64.490	Ursus_americanus
ENSPREG00000000097	frg1	100	67.442	ENSUMAG00000021119	FRG1	100	70.155	Ursus_maritimus
ENSPREG00000000097	frg1	100	65.116	ENSVPAG00000000616	FRG1	100	65.637	Vicugna_pacos
ENSPREG00000000097	frg1	87	69.955	ENSVPAG00000011977	-	94	69.955	Vicugna_pacos
ENSPREG00000000097	frg1	83	71.226	ENSVVUG00000007181	-	77	71.226	Vulpes_vulpes
ENSPREG00000000097	frg1	100	69.922	ENSXETG00000012470	frg1	100	68.750	Xenopus_tropicalis
ENSPREG00000000097	frg1	100	88.123	ENSXCOG00000005312	frg1	100	87.739	Xiphophorus_couchianus
ENSPREG00000000097	frg1	100	97.255	ENSXMAG00000007751	frg1	100	97.255	Xiphophorus_maculatus