EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000144 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8976 bases
Position: chrLG1:3952918-3961893
Accession: 103482407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000162	THUMP	PF02926.17	4.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000000186	-	894	XM_008438579	ENSPREP00000000162	297 (aa)	XP_008436801	-

Gene Model

Click here to download ENSPREG00000000144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000144	thumpd1	88	59.316	ENSG00000066654	THUMPD1	83	50.820	Homo_sapiens
ENSPREG00000000144	thumpd1	86	87.891	ENSAPOG00000008440	thumpd1	84	87.059	Acanthochromis_polyacanthus
ENSPREG00000000144	thumpd1	93	58.123	ENSAMEG00000006257	THUMPD1	75	57.762	Ailuropoda_melanoleuca
ENSPREG00000000144	thumpd1	86	82.031	ENSACIG00000024395	thumpd1	77	85.156	Amphilophus_citrinellus
ENSPREG00000000144	thumpd1	86	87.109	ENSAOCG00000003509	thumpd1	79	88.281	Amphiprion_ocellaris
ENSPREG00000000144	thumpd1	86	87.109	ENSAPEG00000010515	thumpd1	80	88.281	Amphiprion_percula
ENSPREG00000000144	thumpd1	86	88.672	ENSATEG00000004737	thumpd1	80	88.672	Anabas_testudineus
ENSPREG00000000144	thumpd1	85	61.265	ENSAPLG00000015259	THUMPD1	88	61.265	Anas_platyrhynchos
ENSPREG00000000144	thumpd1	52	63.226	ENSACAG00000022881	-	85	63.226	Anolis_carolinensis
ENSPREG00000000144	thumpd1	93	58.363	ENSACAG00000009625	-	88	57.651	Anolis_carolinensis
ENSPREG00000000144	thumpd1	88	47.529	ENSANAG00000027311	-	74	46.768	Aotus_nancymaae
ENSPREG00000000144	thumpd1	88	48.289	ENSANAG00000027040	-	70	47.909	Aotus_nancymaae
ENSPREG00000000144	thumpd1	88	60.076	ENSANAG00000026882	-	74	59.696	Aotus_nancymaae
ENSPREG00000000144	thumpd1	86	83.984	ENSACLG00000004830	thumpd1	80	85.156	Astatotilapia_calliptera
ENSPREG00000000144	thumpd1	92	63.899	ENSAMXG00000012356	thumpd1	84	64.260	Astyanax_mexicanus
ENSPREG00000000144	thumpd1	93	58.484	ENSBTAG00000047673	THUMPD1	76	58.123	Bos_taurus
ENSPREG00000000144	thumpd1	88	59.696	ENSCJAG00000009499	THUMPD1	74	59.316	Callithrix_jacchus
ENSPREG00000000144	thumpd1	98	55.442	ENSCAFG00000017985	THUMPD1	80	55.102	Canis_familiaris
ENSPREG00000000144	thumpd1	98	55.442	ENSCAFG00020021861	THUMPD1	80	55.102	Canis_lupus_dingo
ENSPREG00000000144	thumpd1	93	58.845	ENSCHIG00000010134	THUMPD1	76	58.123	Capra_hircus
ENSPREG00000000144	thumpd1	88	59.316	ENSTSYG00000011537	THUMPD1	74	58.935	Carlito_syrichta
ENSPREG00000000144	thumpd1	52	64.516	ENSCAPG00000015086	-	85	64.516	Cavia_aperea
ENSPREG00000000144	thumpd1	92	59.420	ENSCPOG00000008919	-	76	58.696	Cavia_porcellus
ENSPREG00000000144	thumpd1	92	59.420	ENSCPOG00000023684	-	76	58.696	Cavia_porcellus
ENSPREG00000000144	thumpd1	88	59.696	ENSCCAG00000030205	THUMPD1	74	59.316	Cebus_capucinus
ENSPREG00000000144	thumpd1	88	56.274	ENSCCAG00000019379	-	65	55.894	Cebus_capucinus
ENSPREG00000000144	thumpd1	88	60.076	ENSCATG00000040309	THUMPD1	74	59.696	Cercocebus_atys
ENSPREG00000000144	thumpd1	88	49.057	ENSCATG00000020844	-	73	49.057	Cercocebus_atys
ENSPREG00000000144	thumpd1	88	60.456	ENSCLAG00000016508	THUMPD1	74	59.696	Chinchilla_lanigera
ENSPREG00000000144	thumpd1	87	45.627	ENSCSAG00000009860	-	58	43.590	Chlorocebus_sabaeus
ENSPREG00000000144	thumpd1	88	60.076	ENSCSAG00000007610	THUMPD1	74	59.696	Chlorocebus_sabaeus
ENSPREG00000000144	thumpd1	92	58.909	ENSCHOG00000005587	THUMPD1	73	60.076	Choloepus_hoffmanni
ENSPREG00000000144	thumpd1	89	62.963	ENSCPBG00000019055	THUMPD1	77	63.235	Chrysemys_picta_bellii
ENSPREG00000000144	thumpd1	85	32.353	ENSCING00000021274	-	96	31.985	Ciona_intestinalis
ENSPREG00000000144	thumpd1	78	54.077	ENSCANG00000035822	-	75	54.077	Colobus_angolensis_palliatus
ENSPREG00000000144	thumpd1	64	64.211	ENSCANG00000038770	THUMPD1	61	65.027	Colobus_angolensis_palliatus
ENSPREG00000000144	thumpd1	87	60.606	ENSCGRG00001014829	Thumpd1	73	60.385	Cricetulus_griseus_chok1gshd
ENSPREG00000000144	thumpd1	87	60.606	ENSCGRG00000000060	Thumpd1	73	60.385	Cricetulus_griseus_crigri
ENSPREG00000000144	thumpd1	86	81.569	ENSCSEG00000002041	thumpd1	81	82.745	Cynoglossus_semilaevis
ENSPREG00000000144	thumpd1	86	92.996	ENSCVAG00000014960	thumpd1	79	92.996	Cyprinodon_variegatus
ENSPREG00000000144	thumpd1	88	65.000	ENSDARG00000100264	thumpd1	72	66.275	Danio_rerio
ENSPREG00000000144	thumpd1	88	60.076	ENSDNOG00000043510	THUMPD1	73	59.316	Dasypus_novemcinctus
ENSPREG00000000144	thumpd1	88	60.606	ENSDORG00000028216	Thumpd1	74	60.606	Dipodomys_ordii
ENSPREG00000000144	thumpd1	78	35.366	FBgn0035532	CG15014	75	34.553	Drosophila_melanogaster
ENSPREG00000000144	thumpd1	88	55.133	ENSETEG00000002763	THUMPD1	62	54.373	Echinops_telfairi
ENSPREG00000000144	thumpd1	86	44.318	ENSEBUG00000011011	THUMPD1	71	44.318	Eptatretus_burgeri
ENSPREG00000000144	thumpd1	88	59.696	ENSECAG00000005354	THUMPD1	73	58.935	Equus_caballus
ENSPREG00000000144	thumpd1	92	59.058	ENSEEUG00000011256	THUMPD1	66	58.696	Erinaceus_europaeus
ENSPREG00000000144	thumpd1	92	76.812	ENSELUG00000013612	thumpd1	65	76.812	Esox_lucius
ENSPREG00000000144	thumpd1	93	57.762	ENSFCAG00000039296	THUMPD1	76	57.401	Felis_catus
ENSPREG00000000144	thumpd1	80	60.338	ENSFALG00000014029	THUMPD1	91	57.364	Ficedula_albicollis
ENSPREG00000000144	thumpd1	86	91.829	ENSFHEG00000013319	thumpd1	87	82.667	Fundulus_heteroclitus
ENSPREG00000000144	thumpd1	86	76.654	ENSGMOG00000003369	thumpd1	80	76.265	Gadus_morhua
ENSPREG00000000144	thumpd1	55	61.818	ENSGALG00000031384	-	74	61.818	Gallus_gallus
ENSPREG00000000144	thumpd1	93	93.455	ENSGAFG00000011000	thumpd1	86	93.455	Gambusia_affinis
ENSPREG00000000144	thumpd1	91	79.044	ENSGACG00000019511	thumpd1	82	80.515	Gasterosteus_aculeatus
ENSPREG00000000144	thumpd1	90	63.235	ENSGAGG00000008225	THUMPD1	84	63.971	Gopherus_agassizii
ENSPREG00000000144	thumpd1	88	59.696	ENSGGOG00000005231	-	59	59.316	Gorilla_gorilla
ENSPREG00000000144	thumpd1	62	53.514	ENSGGOG00000043232	-	61	52.973	Gorilla_gorilla
ENSPREG00000000144	thumpd1	86	84.375	ENSHBUG00000017996	thumpd1	80	85.547	Haplochromis_burtoni
ENSPREG00000000144	thumpd1	88	60.837	ENSHGLG00000011001	-	73	60.076	Heterocephalus_glaber_female
ENSPREG00000000144	thumpd1	88	61.217	ENSHGLG00100016023	THUMPD1	73	60.456	Heterocephalus_glaber_male
ENSPREG00000000144	thumpd1	77	71.739	ENSHCOG00000008618	thumpd1	53	71.304	Hippocampus_comes
ENSPREG00000000144	thumpd1	79	67.521	ENSIPUG00000012500	thumpd1	60	65.098	Ictalurus_punctatus
ENSPREG00000000144	thumpd1	88	60.456	ENSSTOG00000007011	THUMPD1	74	60.076	Ictidomys_tridecemlineatus
ENSPREG00000000144	thumpd1	88	58.397	ENSJJAG00000004295	-	74	58.015	Jaculus_jaculus
ENSPREG00000000144	thumpd1	86	66.016	ENSKMAG00000009545	thumpd1	63	66.016	Kryptolebias_marmoratus
ENSPREG00000000144	thumpd1	86	85.547	ENSLBEG00000009349	thumpd1	79	85.547	Labrus_bergylta
ENSPREG00000000144	thumpd1	87	62.676	ENSLACG00000005833	THUMPD1	84	59.150	Latimeria_chalumnae
ENSPREG00000000144	thumpd1	97	65.972	ENSLOCG00000000854	thumpd1	91	65.972	Lepisosteus_oculatus
ENSPREG00000000144	thumpd1	93	58.845	ENSLAFG00000025838	THUMPD1	73	60.456	Loxodonta_africana
ENSPREG00000000144	thumpd1	88	60.076	ENSMFAG00000036996	THUMPD1	74	59.696	Macaca_fascicularis
ENSPREG00000000144	thumpd1	78	51.477	ENSMFAG00000041474	-	75	51.477	Macaca_fascicularis
ENSPREG00000000144	thumpd1	78	51.477	ENSMMUG00000038414	-	75	51.477	Macaca_mulatta
ENSPREG00000000144	thumpd1	88	60.076	ENSMMUG00000004225	THUMPD1	74	59.696	Macaca_mulatta
ENSPREG00000000144	thumpd1	88	60.076	ENSMNEG00000020726	THUMPD1	74	59.696	Macaca_nemestrina
ENSPREG00000000144	thumpd1	84	50.000	ENSMNEG00000038856	-	78	50.000	Macaca_nemestrina
ENSPREG00000000144	thumpd1	88	60.076	ENSMLEG00000036436	THUMPD1	74	59.696	Mandrillus_leucophaeus
ENSPREG00000000144	thumpd1	78	51.915	ENSMLEG00000030012	-	74	51.915	Mandrillus_leucophaeus
ENSPREG00000000144	thumpd1	86	84.766	ENSMAMG00000006858	thumpd1	77	83.203	Mastacembelus_armatus
ENSPREG00000000144	thumpd1	86	84.375	ENSMZEG00005013693	thumpd1	80	85.547	Maylandia_zebra
ENSPREG00000000144	thumpd1	66	61.538	ENSMGAG00000010340	THUMPD1	93	61.856	Meleagris_gallopavo
ENSPREG00000000144	thumpd1	87	60.385	ENSMAUG00000013306	Thumpd1	73	59.615	Mesocricetus_auratus
ENSPREG00000000144	thumpd1	88	60.837	ENSMICG00000038483	-	74	60.456	Microcebus_murinus
ENSPREG00000000144	thumpd1	73	53.241	ENSMICG00000030865	-	61	53.023	Microcebus_murinus
ENSPREG00000000144	thumpd1	87	60.000	ENSMOCG00000003447	Thumpd1	73	59.615	Microtus_ochrogaster
ENSPREG00000000144	thumpd1	86	80.769	ENSMMOG00000011323	thumpd1	76	79.231	Mola_mola
ENSPREG00000000144	thumpd1	86	64.173	ENSMODG00000024776	-	75	61.372	Monodelphis_domestica
ENSPREG00000000144	thumpd1	92	61.011	ENSMODG00000006971	-	75	61.011	Monodelphis_domestica
ENSPREG00000000144	thumpd1	86	85.547	ENSMALG00000019522	thumpd1	81	86.328	Monopterus_albus
ENSPREG00000000144	thumpd1	95	55.822	MGP_CAROLIEiJ_G0030382	Thumpd1	83	55.479	Mus_caroli
ENSPREG00000000144	thumpd1	95	56.164	ENSMUSG00000030942	Thumpd1	83	55.822	Mus_musculus
ENSPREG00000000144	thumpd1	89	59.925	MGP_PahariEiJ_G0013593	Thumpd1	74	60.769	Mus_pahari
ENSPREG00000000144	thumpd1	90	59.851	ENSMLUG00000010547	THUMPD1	77	57.092	Myotis_lucifugus
ENSPREG00000000144	thumpd1	92	59.058	ENSNGAG00000018643	Thumpd1	76	58.696	Nannospalax_galili
ENSPREG00000000144	thumpd1	86	83.984	ENSNBRG00000006987	thumpd1	74	85.156	Neolamprologus_brichardi
ENSPREG00000000144	thumpd1	88	59.696	ENSNLEG00000012369	THUMPD1	74	59.316	Nomascus_leucogenys
ENSPREG00000000144	thumpd1	88	60.076	ENSODEG00000012360	THUMPD1	74	59.316	Octodon_degus
ENSPREG00000000144	thumpd1	86	84.375	ENSONIG00000000146	thumpd1	89	85.547	Oreochromis_niloticus
ENSPREG00000000144	thumpd1	98	56.164	ENSOANG00000014297	THUMPD1	80	55.822	Ornithorhynchus_anatinus
ENSPREG00000000144	thumpd1	88	60.837	ENSOCUG00000009895	-	74	60.456	Oryctolagus_cuniculus
ENSPREG00000000144	thumpd1	92	79.853	ENSORLG00000027557	thumpd1	84	80.443	Oryzias_latipes
ENSPREG00000000144	thumpd1	92	79.853	ENSORLG00020010206	thumpd1	84	80.074	Oryzias_latipes_hni
ENSPREG00000000144	thumpd1	92	79.487	ENSORLG00015009581	thumpd1	84	79.705	Oryzias_latipes_hsok
ENSPREG00000000144	thumpd1	86	82.101	ENSOMEG00000019361	thumpd1	77	81.712	Oryzias_melastigma
ENSPREG00000000144	thumpd1	88	59.316	ENSOGAG00000026723	THUMPD1	74	58.935	Otolemur_garnettii
ENSPREG00000000144	thumpd1	93	58.845	ENSOARG00000013107	THUMPD1	76	58.484	Ovis_aries
ENSPREG00000000144	thumpd1	88	59.316	ENSPPAG00000033818	-	59	58.935	Pan_paniscus
ENSPREG00000000144	thumpd1	79	52.564	ENSPPAG00000001653	-	71	52.137	Pan_paniscus
ENSPREG00000000144	thumpd1	93	58.484	ENSPPRG00000014118	-	76	58.123	Panthera_pardus
ENSPREG00000000144	thumpd1	93	58.123	ENSPTIG00000013856	-	76	57.762	Panthera_tigris_altaica
ENSPREG00000000144	thumpd1	88	59.316	ENSPTRG00000007848	THUMPD1	59	58.935	Pan_troglodytes
ENSPREG00000000144	thumpd1	75	50.446	ENSPTRG00000046073	-	66	50.000	Pan_troglodytes
ENSPREG00000000144	thumpd1	78	51.899	ENSPANG00000034881	-	75	51.899	Papio_anubis
ENSPREG00000000144	thumpd1	88	60.076	ENSPANG00000025507	THUMPD1	74	59.696	Papio_anubis
ENSPREG00000000144	thumpd1	93	65.818	ENSPKIG00000014491	thumpd1	81	67.669	Paramormyrops_kingsleyae
ENSPREG00000000144	thumpd1	84	63.889	ENSPSIG00000012430	THUMPD1	86	63.492	Pelodiscus_sinensis
ENSPREG00000000144	thumpd1	86	82.490	ENSPMGG00000014479	thumpd1	90	82.490	Periophthalmus_magnuspinnatus
ENSPREG00000000144	thumpd1	64	41.379	ENSPEMG00000002608	-	85	41.872	Peromyscus_maniculatus_bairdii
ENSPREG00000000144	thumpd1	62	52.459	ENSPMAG00000001389	thumpd1	83	53.977	Petromyzon_marinus
ENSPREG00000000144	thumpd1	88	62.500	ENSPCIG00000029241	THUMPD1	52	62.500	Phascolarctos_cinereus
ENSPREG00000000144	thumpd1	88	94.891	ENSPFOG00000012649	thumpd1	87	92.857	Poecilia_formosa
ENSPREG00000000144	thumpd1	88	94.872	ENSPLAG00000000137	thumpd1	85	94.872	Poecilia_latipinna
ENSPREG00000000144	thumpd1	88	95.238	ENSPMEG00000007750	thumpd1	87	93.190	Poecilia_mexicana
ENSPREG00000000144	thumpd1	63	63.298	ENSPPYG00000007160	-	66	63.934	Pongo_abelii
ENSPREG00000000144	thumpd1	63	64.362	ENSPCAG00000001534	THUMPD1	65	65.027	Procavia_capensis
ENSPREG00000000144	thumpd1	88	60.837	ENSPCOG00000024663	THUMPD1	74	60.456	Propithecus_coquereli
ENSPREG00000000144	thumpd1	52	59.477	ENSPVAG00000003286	-	68	59.477	Pteropus_vampyrus
ENSPREG00000000144	thumpd1	92	56.884	ENSPVAG00000005659	-	76	56.522	Pteropus_vampyrus
ENSPREG00000000144	thumpd1	86	84.375	ENSPNYG00000007061	thumpd1	79	85.547	Pundamilia_nyererei
ENSPREG00000000144	thumpd1	88	68.077	ENSPNAG00000024872	thumpd1	82	71.084	Pygocentrus_nattereri
ENSPREG00000000144	thumpd1	78	55.365	ENSRBIG00000040136	-	78	55.365	Rhinopithecus_bieti
ENSPREG00000000144	thumpd1	88	60.076	ENSRBIG00000040752	THUMPD1	74	59.696	Rhinopithecus_bieti
ENSPREG00000000144	thumpd1	88	60.076	ENSRROG00000042189	THUMPD1	74	59.696	Rhinopithecus_roxellana
ENSPREG00000000144	thumpd1	78	54.936	ENSRROG00000045699	-	78	54.936	Rhinopithecus_roxellana
ENSPREG00000000144	thumpd1	88	60.837	ENSSBOG00000034246	THUMPD1	74	60.076	Saimiri_boliviensis_boliviensis
ENSPREG00000000144	thumpd1	88	62.879	ENSSHAG00000003853	THUMPD1	73	61.977	Sarcophilus_harrisii
ENSPREG00000000144	thumpd1	92	59.140	ENSSFOG00015007512	thumpd1	82	59.273	Scleropages_formosus
ENSPREG00000000144	thumpd1	86	85.547	ENSSMAG00000000723	thumpd1	77	86.328	Scophthalmus_maximus
ENSPREG00000000144	thumpd1	86	87.500	ENSSDUG00000014502	thumpd1	79	88.281	Seriola_dumerili
ENSPREG00000000144	thumpd1	86	87.109	ENSSLDG00000007694	thumpd1	79	87.891	Seriola_lalandi_dorsalis
ENSPREG00000000144	thumpd1	87	60.985	ENSSPUG00000005096	THUMPD1	80	60.456	Sphenodon_punctatus
ENSPREG00000000144	thumpd1	86	88.672	ENSSPAG00000006993	thumpd1	80	89.844	Stegastes_partitus
ENSPREG00000000144	thumpd1	93	58.484	ENSSSCG00000024748	THUMPD1	76	58.484	Sus_scrofa
ENSPREG00000000144	thumpd1	85	62.055	ENSTGUG00000009247	THUMPD1	91	62.055	Taeniopygia_guttata
ENSPREG00000000144	thumpd1	86	87.500	ENSTRUG00000015656	thumpd1	79	87.500	Takifugu_rubripes
ENSPREG00000000144	thumpd1	92	80.515	ENSTNIG00000001584	thumpd1	92	79.433	Tetraodon_nigroviridis
ENSPREG00000000144	thumpd1	88	58.779	ENSTBEG00000005252	THUMPD1	65	58.397	Tupaia_belangeri
ENSPREG00000000144	thumpd1	88	61.217	ENSTTRG00000016435	THUMPD1	73	60.837	Tursiops_truncatus
ENSPREG00000000144	thumpd1	53	54.487	ENSUAMG00000005779	-	66	54.487	Ursus_americanus
ENSPREG00000000144	thumpd1	93	59.567	ENSVPAG00000003422	THUMPD1	78	58.845	Vicugna_pacos
ENSPREG00000000144	thumpd1	93	57.762	ENSVVUG00000023241	THUMPD1	76	57.401	Vulpes_vulpes
ENSPREG00000000144	thumpd1	64	62.304	ENSXETG00000005539	thumpd1	66	61.735	Xenopus_tropicalis
ENSPREG00000000144	thumpd1	88	94.505	ENSXMAG00000026052	thumpd1	86	94.505	Xiphophorus_maculatus