EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000000315 (Gene tree)
Gene ID: 103463949
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 10951 bases
Position: chrLG1:9168149-9179099
Accession: 103463949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000411	MMR_HSR1	PF01926.23	2.5e-08	1	1
ENSPREP00000000410	MMR_HSR1	PF01926.23	6.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000000438	SRL (1 of many)-201	2298	XM_008407739	ENSPREP00000000410	765 (aa)	XP_008405961	UPI0004A32E79
ENSPRET00000000439	SRL (1 of many)-202	1341	-	ENSPREP00000000411	446 (aa)	-	-

Gene Model

Click here to download ENSPREG00000000315's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000315's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000000315	SRL	84	32.713	ENSPREG00000012884	ehd3	70	32.474
ENSPREG00000000315	SRL	89	31.407	ENSPREG00000003513	ehd4	70	31.407
ENSPREG00000000315	SRL	80	33.889	ENSPREG00000016332	ehd2b	65	34.426
ENSPREG00000000315	SRL	92	30.266	ENSPREG00000015893	ehd1a	75	30.266
ENSPREG00000000315	SRL	86	31.688	ENSPREG00000017608	ehd2a	68	31.688
ENSPREG00000000315	SRL	99	77.902	ENSPREG00000007751	srl	99	77.902

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000315	SRL	98	75.792	ENSG00000185739	SRL	99	76.977	Homo_sapiens
ENSPREG00000000315	SRL	99	89.663	ENSAPOG00000012432	SRL	99	89.663	Acanthochromis_polyacanthus
ENSPREG00000000315	SRL	100	76.837	ENSAPOG00000018093	srl	99	77.098	Acanthochromis_polyacanthus
ENSPREG00000000315	SRL	98	75.566	ENSAMEG00000010862	SRL	50	76.697	Ailuropoda_melanoleuca
ENSPREG00000000315	SRL	100	77.728	ENSACIG00000015799	srl	99	77.728	Amphilophus_citrinellus
ENSPREG00000000315	SRL	99	89.438	ENSACIG00000015419	SRL	99	89.438	Amphilophus_citrinellus
ENSPREG00000000315	SRL	99	87.973	ENSAOCG00000017049	SRL	98	88.419	Amphiprion_ocellaris
ENSPREG00000000315	SRL	97	77.419	ENSAOCG00000007574	srl	100	77.419	Amphiprion_ocellaris
ENSPREG00000000315	SRL	100	77.060	ENSAPEG00000006911	srl	97	75.214	Amphiprion_percula
ENSPREG00000000315	SRL	99	83.596	ENSAPEG00000006533	SRL	98	84.410	Amphiprion_percula
ENSPREG00000000315	SRL	99	84.816	ENSATEG00000009643	SRL	71	74.797	Anabas_testudineus
ENSPREG00000000315	SRL	99	77.928	ENSATEG00000024315	srl	97	75.641	Anabas_testudineus
ENSPREG00000000315	SRL	98	75.055	ENSACAG00000016380	SRL	85	74.459	Anolis_carolinensis
ENSPREG00000000315	SRL	99	85.249	ENSACLG00000024674	SRL	70	77.990	Astatotilapia_calliptera
ENSPREG00000000315	SRL	100	77.951	ENSACLG00000027685	srl	98	77.728	Astatotilapia_calliptera
ENSPREG00000000315	SRL	93	80.336	ENSAMXG00000038693	SRL	100	77.042	Astyanax_mexicanus
ENSPREG00000000315	SRL	99	76.562	ENSAMXG00000018789	srl	88	76.562	Astyanax_mexicanus
ENSPREG00000000315	SRL	98	75.283	ENSBTAG00000001078	SRL	56	76.417	Bos_taurus
ENSPREG00000000315	SRL	98	76.018	ENSCJAG00000019750	SRL	93	77.149	Callithrix_jacchus
ENSPREG00000000315	SRL	98	75.566	ENSCAFG00000019233	SRL	88	70.782	Canis_familiaris
ENSPREG00000000315	SRL	98	75.566	ENSCAFG00020025024	SRL	64	67.603	Canis_lupus_dingo
ENSPREG00000000315	SRL	98	75.283	ENSCHIG00000017927	SRL	55	76.417	Capra_hircus
ENSPREG00000000315	SRL	98	75.792	ENSTSYG00000007919	SRL	99	77.209	Carlito_syrichta
ENSPREG00000000315	SRL	98	76.018	ENSCPOG00000012643	SRL	94	77.149	Cavia_porcellus
ENSPREG00000000315	SRL	98	71.719	ENSCCAG00000032646	SRL	100	78.628	Cebus_capucinus
ENSPREG00000000315	SRL	98	75.964	ENSCATG00000032227	-	93	76.923	Cercocebus_atys
ENSPREG00000000315	SRL	98	76.018	ENSCLAG00000016242	SRL	94	77.149	Chinchilla_lanigera
ENSPREG00000000315	SRL	86	78.442	ENSCHOG00000001618	SRL	52	79.740	Choloepus_hoffmanni
ENSPREG00000000315	SRL	98	78.608	ENSCPBG00000026371	SRL	93	74.558	Chrysemys_picta_bellii
ENSPREG00000000315	SRL	94	55.819	ENSCING00000005231	-	94	55.819	Ciona_intestinalis
ENSPREG00000000315	SRL	98	75.792	ENSCANG00000035872	SRL	99	76.977	Colobus_angolensis_palliatus
ENSPREG00000000315	SRL	98	76.417	ENSCGRG00001016630	Srl	94	77.376	Cricetulus_griseus_chok1gshd
ENSPREG00000000315	SRL	98	76.417	ENSCGRG00000005458	Srl	94	77.376	Cricetulus_griseus_crigri
ENSPREG00000000315	SRL	100	76.615	ENSCSEG00000016151	srl	96	76.615	Cynoglossus_semilaevis
ENSPREG00000000315	SRL	100	82.889	ENSCSEG00000011866	SRL	91	82.759	Cynoglossus_semilaevis
ENSPREG00000000315	SRL	99	91.703	ENSCVAG00000022465	SRL	97	75.658	Cyprinodon_variegatus
ENSPREG00000000315	SRL	99	77.556	ENSCVAG00000003513	srl	97	77.556	Cyprinodon_variegatus
ENSPREG00000000315	SRL	100	77.506	ENSDARG00000104587	srl	96	77.506	Danio_rerio
ENSPREG00000000315	SRL	84	80.990	ENSDARG00000112959	CABZ01072309.1	100	80.990	Danio_rerio
ENSPREG00000000315	SRL	98	75.339	ENSDNOG00000011643	SRL	53	76.471	Dasypus_novemcinctus
ENSPREG00000000315	SRL	98	76.018	ENSDORG00000014807	Srl	94	77.149	Dipodomys_ordii
ENSPREG00000000315	SRL	83	62.331	ENSEBUG00000015937	srl	93	62.331	Eptatretus_burgeri
ENSPREG00000000315	SRL	98	75.737	ENSEASG00005000942	SRL	53	76.871	Equus_asinus_asinus
ENSPREG00000000315	SRL	98	75.737	ENSECAG00000024219	SRL	93	76.871	Equus_caballus
ENSPREG00000000315	SRL	100	74.409	ENSELUG00000015616	srl	96	73.486	Esox_lucius
ENSPREG00000000315	SRL	99	79.646	ENSELUG00000022266	SRL	53	73.767	Esox_lucius
ENSPREG00000000315	SRL	98	76.018	ENSFCAG00000022075	SRL	97	72.340	Felis_catus
ENSPREG00000000315	SRL	99	75.446	ENSFALG00000004328	SRL	64	75.446	Ficedula_albicollis
ENSPREG00000000315	SRL	98	76.244	ENSFDAG00000006199	SRL	94	77.376	Fukomys_damarensis
ENSPREG00000000315	SRL	99	77.455	ENSFHEG00000011239	srl	97	77.455	Fundulus_heteroclitus
ENSPREG00000000315	SRL	99	92.135	ENSFHEG00000011854	SRL	99	93.258	Fundulus_heteroclitus
ENSPREG00000000315	SRL	98	75.771	ENSGMOG00000014954	srl	100	75.771	Gadus_morhua
ENSPREG00000000315	SRL	99	75.670	ENSGALG00000038884	SRL	95	75.670	Gallus_gallus
ENSPREG00000000315	SRL	99	77.902	ENSGAFG00000000010	srl	97	77.902	Gambusia_affinis
ENSPREG00000000315	SRL	100	97.982	ENSGAFG00000016984	SRL	100	97.982	Gambusia_affinis
ENSPREG00000000315	SRL	99	76.044	ENSGACG00000011332	srl	100	76.044	Gasterosteus_aculeatus
ENSPREG00000000315	SRL	98	75.964	ENSGGOG00000011312	-	93	76.923	Gorilla_gorilla
ENSPREG00000000315	SRL	100	77.951	ENSHBUG00000007581	srl	98	77.728	Haplochromis_burtoni
ENSPREG00000000315	SRL	99	85.683	ENSHBUG00000015710	SRL	70	77.990	Haplochromis_burtoni
ENSPREG00000000315	SRL	98	76.018	ENSHGLG00000015271	SRL	94	77.149	Heterocephalus_glaber_female
ENSPREG00000000315	SRL	98	76.018	ENSHGLG00100019378	SRL	94	77.149	Heterocephalus_glaber_male
ENSPREG00000000315	SRL	99	84.649	ENSHCOG00000001012	SRL	69	73.875	Hippocampus_comes
ENSPREG00000000315	SRL	100	77.283	ENSHCOG00000008687	srl	99	77.232	Hippocampus_comes
ENSPREG00000000315	SRL	98	70.306	ENSIPUG00000011609	SRL	100	70.306	Ictalurus_punctatus
ENSPREG00000000315	SRL	100	75.278	ENSIPUG00000012513	srl	96	75.278	Ictalurus_punctatus
ENSPREG00000000315	SRL	98	76.244	ENSSTOG00000021151	-	94	77.376	Ictidomys_tridecemlineatus
ENSPREG00000000315	SRL	98	76.244	ENSJJAG00000016400	Srl	94	77.376	Jaculus_jaculus
ENSPREG00000000315	SRL	98	90.868	ENSKMAG00000019537	SRL	100	90.868	Kryptolebias_marmoratus
ENSPREG00000000315	SRL	98	78.391	ENSKMAG00000014115	srl	98	75.839	Kryptolebias_marmoratus
ENSPREG00000000315	SRL	100	77.283	ENSLBEG00000026643	srl	97	75.427	Labrus_bergylta
ENSPREG00000000315	SRL	99	85.491	ENSLBEG00000013811	SRL	99	84.648	Labrus_bergylta
ENSPREG00000000315	SRL	100	73.051	ENSLACG00000002825	SRL	99	73.051	Latimeria_chalumnae
ENSPREG00000000315	SRL	100	76.615	ENSLOCG00000002644	srl	96	76.615	Lepisosteus_oculatus
ENSPREG00000000315	SRL	98	75.339	ENSLAFG00000006329	SRL	50	76.471	Loxodonta_africana
ENSPREG00000000315	SRL	96	75.814	ENSMFAG00000037383	SRL	99	76.977	Macaca_fascicularis
ENSPREG00000000315	SRL	98	75.964	ENSMNEG00000019236	-	93	76.923	Macaca_nemestrina
ENSPREG00000000315	SRL	98	69.683	ENSMLEG00000032156	SRL	93	70.814	Mandrillus_leucophaeus
ENSPREG00000000315	SRL	99	85.435	ENSMAMG00000013756	SRL	79	78.292	Mastacembelus_armatus
ENSPREG00000000315	SRL	99	77.477	ENSMAMG00000023322	srl	95	77.060	Mastacembelus_armatus
ENSPREG00000000315	SRL	100	77.951	ENSMZEG00005004548	srl	98	77.728	Maylandia_zebra
ENSPREG00000000315	SRL	99	85.466	ENSMZEG00005004010	SRL	70	78.336	Maylandia_zebra
ENSPREG00000000315	SRL	99	75.670	ENSMGAG00000009342	SRL	94	79.893	Meleagris_gallopavo
ENSPREG00000000315	SRL	98	76.244	ENSMICG00000032307	SRL	93	77.376	Microcebus_murinus
ENSPREG00000000315	SRL	98	75.792	ENSMOCG00000008208	Srl	94	76.923	Microtus_ochrogaster
ENSPREG00000000315	SRL	98	84.802	ENSMMOG00000021572	SRL	99	84.802	Mola_mola
ENSPREG00000000315	SRL	100	76.837	ENSMMOG00000013970	srl	99	76.837	Mola_mola
ENSPREG00000000315	SRL	98	78.231	ENSMODG00000016380	-	50	78.231	Monodelphis_domestica
ENSPREG00000000315	SRL	93	87.260	ENSMALG00000000670	SRL	98	87.260	Monopterus_albus
ENSPREG00000000315	SRL	100	76.615	ENSMALG00000005039	srl	98	77.376	Monopterus_albus
ENSPREG00000000315	SRL	98	77.376	MGP_CAROLIEiJ_G0020400	Srl	94	77.376	Mus_caroli
ENSPREG00000000315	SRL	98	77.551	ENSMUSG00000022519	Srl	94	77.376	Mus_musculus
ENSPREG00000000315	SRL	98	77.376	MGP_SPRETEiJ_G0021294	Srl	94	77.376	Mus_spretus
ENSPREG00000000315	SRL	98	75.566	ENSMPUG00000015025	SRL	54	76.697	Mustela_putorius_furo
ENSPREG00000000315	SRL	98	76.018	ENSMLUG00000030733	SRL	56	77.149	Myotis_lucifugus
ENSPREG00000000315	SRL	98	76.471	ENSNGAG00000019741	Srl	94	77.602	Nannospalax_galili
ENSPREG00000000315	SRL	100	77.951	ENSNBRG00000023775	srl	96	77.951	Neolamprologus_brichardi
ENSPREG00000000315	SRL	99	84.816	ENSNBRG00000002422	SRL	72	76.978	Neolamprologus_brichardi
ENSPREG00000000315	SRL	98	71.041	ENSNLEG00000029051	SRL	93	72.172	Nomascus_leucogenys
ENSPREG00000000315	SRL	98	70.588	ENSOPRG00000000477	-	52	71.719	Ochotona_princeps
ENSPREG00000000315	SRL	98	76.697	ENSODEG00000013256	SRL	94	77.828	Octodon_degus
ENSPREG00000000315	SRL	100	77.728	ENSONIG00000005192	srl	95	77.728	Oreochromis_niloticus
ENSPREG00000000315	SRL	100	77.283	ENSORLG00000008291	srl	93	78.680	Oryzias_latipes
ENSPREG00000000315	SRL	99	89.663	ENSORLG00000015064	SRL	98	89.663	Oryzias_latipes
ENSPREG00000000315	SRL	100	77.728	ENSORLG00020019784	srl	81	79.188	Oryzias_latipes_hni
ENSPREG00000000315	SRL	99	89.888	ENSORLG00020018173	SRL	98	89.888	Oryzias_latipes_hni
ENSPREG00000000315	SRL	100	77.506	ENSORLG00015009342	srl	94	75.641	Oryzias_latipes_hsok
ENSPREG00000000315	SRL	99	89.888	ENSORLG00015019063	SRL	98	89.888	Oryzias_latipes_hsok
ENSPREG00000000315	SRL	100	77.951	ENSOMEG00000010006	srl	98	78.409	Oryzias_melastigma
ENSPREG00000000315	SRL	99	86.334	ENSOMEG00000005682	SRL	67	90.239	Oryzias_melastigma
ENSPREG00000000315	SRL	100	74.833	ENSOGAG00000029266	SRL	65	65.536	Otolemur_garnettii
ENSPREG00000000315	SRL	98	75.283	ENSOARG00000003074	SRL	55	76.417	Ovis_aries
ENSPREG00000000315	SRL	98	75.964	ENSPPAG00000024919	-	99	76.977	Pan_paniscus
ENSPREG00000000315	SRL	98	76.018	ENSPPRG00000010274	SRL	99	76.279	Panthera_pardus
ENSPREG00000000315	SRL	98	76.018	ENSPTIG00000015162	SRL	99	76.279	Panthera_tigris_altaica
ENSPREG00000000315	SRL	98	75.964	ENSPTRG00000007712	SRL	99	76.977	Pan_troglodytes
ENSPREG00000000315	SRL	98	75.792	ENSPANG00000013804	SRL	95	76.923	Papio_anubis
ENSPREG00000000315	SRL	99	75.561	ENSPKIG00000024974	SRL	91	72.708	Paramormyrops_kingsleyae
ENSPREG00000000315	SRL	100	77.728	ENSPKIG00000006405	srl	95	77.728	Paramormyrops_kingsleyae
ENSPREG00000000315	SRL	100	77.283	ENSPMGG00000021081	srl	97	77.283	Periophthalmus_magnuspinnatus
ENSPREG00000000315	SRL	98	85.421	ENSPMGG00000023505	-	99	85.421	Periophthalmus_magnuspinnatus
ENSPREG00000000315	SRL	98	76.018	ENSPEMG00000015842	Srl	94	77.149	Peromyscus_maniculatus_bairdii
ENSPREG00000000315	SRL	93	64.679	ENSPMAG00000004786	srl	99	64.679	Petromyzon_marinus
ENSPREG00000000315	SRL	99	77.009	ENSPCIG00000012128	SRL	98	77.009	Phascolarctos_cinereus
ENSPREG00000000315	SRL	99	76.304	ENSPFOG00000011408	srl	95	76.304	Poecilia_formosa
ENSPREG00000000315	SRL	100	98.655	ENSPLAG00000002932	SRL	100	98.655	Poecilia_latipinna
ENSPREG00000000315	SRL	99	78.125	ENSPLAG00000008017	srl	97	78.125	Poecilia_latipinna
ENSPREG00000000315	SRL	100	96.601	ENSPMEG00000005890	SRL	100	96.601	Poecilia_mexicana
ENSPREG00000000315	SRL	99	78.125	ENSPMEG00000006745	srl	97	78.125	Poecilia_mexicana
ENSPREG00000000315	SRL	96	75.349	ENSPPYG00000007053	SRL	100	76.512	Pongo_abelii
ENSPREG00000000315	SRL	98	76.190	ENSPCAG00000003378	-	50	77.324	Procavia_capensis
ENSPREG00000000315	SRL	98	75.792	ENSPCOG00000023135	SRL	99	77.209	Propithecus_coquereli
ENSPREG00000000315	SRL	98	76.244	ENSPVAG00000006586	SRL	54	77.376	Pteropus_vampyrus
ENSPREG00000000315	SRL	99	85.466	ENSPNYG00000003423	SRL	70	78.510	Pundamilia_nyererei
ENSPREG00000000315	SRL	100	77.951	ENSPNYG00000001200	srl	98	77.728	Pundamilia_nyererei
ENSPREG00000000315	SRL	100	76.169	ENSPNAG00000023106	srl	96	76.169	Pygocentrus_nattereri
ENSPREG00000000315	SRL	99	79.596	ENSPNAG00000007361	-	92	79.596	Pygocentrus_nattereri
ENSPREG00000000315	SRL	98	75.964	ENSRBIG00000042358	SRL	52	68.138	Rhinopithecus_bieti
ENSPREG00000000315	SRL	98	76.190	ENSSBOG00000029273	SRL	93	77.149	Saimiri_boliviensis_boliviensis
ENSPREG00000000315	SRL	99	76.072	ENSSFOG00015021327	SRL	50	75.785	Scleropages_formosus
ENSPREG00000000315	SRL	99	77.477	ENSSFOG00015009773	srl	96	77.060	Scleropages_formosus
ENSPREG00000000315	SRL	100	77.060	ENSSMAG00000016274	srl	98	77.060	Scophthalmus_maximus
ENSPREG00000000315	SRL	100	83.369	ENSSMAG00000002232	SRL	93	74.536	Scophthalmus_maximus
ENSPREG00000000315	SRL	99	78.251	ENSSDUG00000010808	srl	98	78.251	Seriola_dumerili
ENSPREG00000000315	SRL	100	86.755	ENSSDUG00000009161	SRL	100	86.755	Seriola_dumerili
ENSPREG00000000315	SRL	100	78.174	ENSSLDG00000022024	srl	97	77.951	Seriola_lalandi_dorsalis
ENSPREG00000000315	SRL	98	86.593	ENSSLDG00000014601	SRL	99	90.769	Seriola_lalandi_dorsalis
ENSPREG00000000315	SRL	99	74.165	ENSSPUG00000016859	SRL	99	74.165	Sphenodon_punctatus
ENSPREG00000000315	SRL	99	88.539	ENSSPAG00000014254	SRL	99	88.539	Stegastes_partitus
ENSPREG00000000315	SRL	100	77.060	ENSSPAG00000019105	srl	97	75.267	Stegastes_partitus
ENSPREG00000000315	SRL	98	75.737	ENSSSCG00000007949	SRL	98	76.871	Sus_scrofa
ENSPREG00000000315	SRL	99	75.446	ENSTGUG00000003951	-	98	75.446	Taeniopygia_guttata
ENSPREG00000000315	SRL	80	81.180	ENSTGUG00000016121	-	98	81.180	Taeniopygia_guttata
ENSPREG00000000315	SRL	93	86.538	ENSTRUG00000013310	SRL	97	61.240	Takifugu_rubripes
ENSPREG00000000315	SRL	100	77.283	ENSTRUG00000006005	srl	96	77.283	Takifugu_rubripes
ENSPREG00000000315	SRL	100	77.060	ENSTNIG00000009739	srl	96	77.060	Tetraodon_nigroviridis
ENSPREG00000000315	SRL	98	75.566	ENSUAMG00000005701	SRL	55	76.697	Ursus_americanus
ENSPREG00000000315	SRL	98	75.566	ENSUMAG00000002574	SRL	55	76.697	Ursus_maritimus
ENSPREG00000000315	SRL	98	75.566	ENSVVUG00000016331	-	57	67.477	Vulpes_vulpes
ENSPREG00000000315	SRL	98	76.018	ENSXETG00000017313	srl	98	76.018	Xenopus_tropicalis
ENSPREG00000000315	SRL	94	78.960	ENSXCOG00000010424	srl	97	78.960	Xiphophorus_couchianus
ENSPREG00000000315	SRL	100	98.206	ENSXCOG00000014584	SRL	99	98.206	Xiphophorus_couchianus
ENSPREG00000000315	SRL	99	77.902	ENSXMAG00000004625	srl	91	77.902	Xiphophorus_maculatus
ENSPREG00000000315	SRL	100	95.671	ENSXMAG00000027598	SRL	100	94.823	Xiphophorus_maculatus