EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000475 (Gene tree)
Gene ID: 103465042
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 12756 bases
Position: chrLG1:12934330-12947085
Accession: 103465042
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000637	Suf	PF05843.14	4.4e-08	1	1
ENSPREP00000000637	S1	PF00575.23	6.4e-52	1	4
ENSPREP00000000637	S1	PF00575.23	6.4e-52	2	4
ENSPREP00000000637	S1	PF00575.23	6.4e-52	3	4
ENSPREP00000000637	S1	PF00575.23	6.4e-52	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000000667	-	5510	XM_008409564	ENSPREP00000000637	1810 (aa)	XP_008407786	UPI0004A3637D

Gene Model

Click here to download ENSPREG00000000475's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000475's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000475	pdcd11	99	44.391	ENSG00000148843	PDCD11	99	44.125	Homo_sapiens
ENSPREG00000000475	pdcd11	100	73.286	ENSAPOG00000015629	pdcd11	100	72.792	Acanthochromis_polyacanthus
ENSPREG00000000475	pdcd11	99	44.674	ENSAMEG00000017935	PDCD11	99	44.474	Ailuropoda_melanoleuca
ENSPREG00000000475	pdcd11	50	64.145	ENSACIG00000006458	-	98	64.035	Amphilophus_citrinellus
ENSPREG00000000475	pdcd11	100	73.106	ENSAOCG00000015287	pdcd11	100	72.777	Amphiprion_ocellaris
ENSPREG00000000475	pdcd11	65	69.712	ENSAPEG00000020240	pdcd11	99	69.116	Amphiprion_percula
ENSPREG00000000475	pdcd11	99	72.314	ENSATEG00000021043	pdcd11	99	72.134	Anabas_testudineus
ENSPREG00000000475	pdcd11	99	44.918	ENSAPLG00000010301	PDCD11	99	44.888	Anas_platyrhynchos
ENSPREG00000000475	pdcd11	99	45.024	ENSACAG00000004796	PDCD11	99	45.060	Anolis_carolinensis
ENSPREG00000000475	pdcd11	99	44.391	ENSANAG00000034576	PDCD11	99	44.232	Aotus_nancymaae
ENSPREG00000000475	pdcd11	92	80.170	ENSACLG00000018236	pdcd11	99	80.170	Astatotilapia_calliptera
ENSPREG00000000475	pdcd11	99	47.498	ENSAMXG00000005458	pdcd11	96	51.696	Astyanax_mexicanus
ENSPREG00000000475	pdcd11	99	44.444	ENSBTAG00000009715	PDCD11	99	44.291	Bos_taurus
ENSPREG00000000475	pdcd11	99	44.321	ENSCJAG00000018257	PDCD11	99	44.315	Callithrix_jacchus
ENSPREG00000000475	pdcd11	99	44.621	ENSCAFG00000010411	PDCD11	99	44.302	Canis_familiaris
ENSPREG00000000475	pdcd11	99	45.323	ENSCAFG00020010369	PDCD11	99	44.726	Canis_lupus_dingo
ENSPREG00000000475	pdcd11	99	44.186	ENSCHIG00000025218	PDCD11	99	44.038	Capra_hircus
ENSPREG00000000475	pdcd11	96	43.837	ENSTSYG00000033423	PDCD11	98	43.628	Carlito_syrichta
ENSPREG00000000475	pdcd11	90	40.295	ENSCAPG00000005386	PDCD11	98	40.295	Cavia_aperea
ENSPREG00000000475	pdcd11	99	43.404	ENSCPOG00000010957	PDCD11	99	44.289	Cavia_porcellus
ENSPREG00000000475	pdcd11	99	44.238	ENSCCAG00000018950	PDCD11	99	44.019	Cebus_capucinus
ENSPREG00000000475	pdcd11	99	44.368	ENSCATG00000044331	PDCD11	99	44.208	Cercocebus_atys
ENSPREG00000000475	pdcd11	99	44.118	ENSCLAG00000001029	PDCD11	99	44.064	Chinchilla_lanigera
ENSPREG00000000475	pdcd11	99	44.208	ENSCSAG00000005346	PDCD11	99	43.996	Chlorocebus_sabaeus
ENSPREG00000000475	pdcd11	69	72.093	ENSCHOG00000004796	PDCD11	74	72.093	Choloepus_hoffmanni
ENSPREG00000000475	pdcd11	93	60.647	ENSCPBG00000024487	PDCD11	99	63.988	Chrysemys_picta_bellii
ENSPREG00000000475	pdcd11	99	44.368	ENSCANG00000043300	PDCD11	99	44.043	Colobus_angolensis_palliatus
ENSPREG00000000475	pdcd11	99	44.013	ENSCGRG00001006458	Pdcd11	99	44.066	Cricetulus_griseus_chok1gshd
ENSPREG00000000475	pdcd11	99	43.883	ENSCGRG00000003583	Pdcd11	99	43.936	Cricetulus_griseus_crigri
ENSPREG00000000475	pdcd11	97	68.210	ENSCSEG00000010739	pdcd11	99	68.192	Cynoglossus_semilaevis
ENSPREG00000000475	pdcd11	99	69.850	ENSCVAG00000018903	pdcd11	100	69.850	Cyprinodon_variegatus
ENSPREG00000000475	pdcd11	100	51.616	ENSDARG00000052480	pdcd11	100	51.564	Danio_rerio
ENSPREG00000000475	pdcd11	99	43.866	ENSDNOG00000013838	PDCD11	99	43.568	Dasypus_novemcinctus
ENSPREG00000000475	pdcd11	99	43.506	ENSDORG00000010420	Pdcd11	99	43.737	Dipodomys_ordii
ENSPREG00000000475	pdcd11	76	31.742	FBgn0039182	CG5728	91	33.702	Drosophila_melanogaster
ENSPREG00000000475	pdcd11	93	40.564	ENSETEG00000000813	PDCD11	98	40.564	Echinops_telfairi
ENSPREG00000000475	pdcd11	72	49.655	ENSEBUG00000002358	-	89	49.655	Eptatretus_burgeri
ENSPREG00000000475	pdcd11	95	45.122	ENSEASG00005015159	PDCD11	99	45.505	Equus_asinus_asinus
ENSPREG00000000475	pdcd11	99	45.238	ENSECAG00000020507	PDCD11	99	45.127	Equus_caballus
ENSPREG00000000475	pdcd11	93	44.849	ENSEEUG00000009245	PDCD11	89	54.545	Erinaceus_europaeus
ENSPREG00000000475	pdcd11	100	58.283	ENSELUG00000004211	pdcd11	99	58.073	Esox_lucius
ENSPREG00000000475	pdcd11	99	44.580	ENSFCAG00000002384	PDCD11	99	44.309	Felis_catus
ENSPREG00000000475	pdcd11	99	45.499	ENSFALG00000008775	PDCD11	99	45.606	Ficedula_albicollis
ENSPREG00000000475	pdcd11	99	43.876	ENSFDAG00000009532	PDCD11	99	43.717	Fukomys_damarensis
ENSPREG00000000475	pdcd11	90	91.118	ENSFHEG00000022997	pdcd11	96	91.118	Fundulus_heteroclitus
ENSPREG00000000475	pdcd11	93	62.295	ENSGMOG00000004186	pdcd11	94	62.169	Gadus_morhua
ENSPREG00000000475	pdcd11	77	43.258	ENSGALG00000008265	PDCD11	99	42.544	Gallus_gallus
ENSPREG00000000475	pdcd11	96	89.739	ENSGAFG00000012806	pdcd11	100	89.366	Gambusia_affinis
ENSPREG00000000475	pdcd11	100	68.076	ENSGACG00000018233	pdcd11	97	81.842	Gasterosteus_aculeatus
ENSPREG00000000475	pdcd11	95	47.824	ENSGAGG00000024314	PDCD11	99	48.136	Gopherus_agassizii
ENSPREG00000000475	pdcd11	99	44.468	ENSGGOG00000011621	PDCD11	99	44.202	Gorilla_gorilla
ENSPREG00000000475	pdcd11	99	72.418	ENSHBUG00000020226	pdcd11	99	72.332	Haplochromis_burtoni
ENSPREG00000000475	pdcd11	99	44.186	ENSHGLG00000001462	PDCD11	99	44.256	Heterocephalus_glaber_female
ENSPREG00000000475	pdcd11	99	43.658	ENSHGLG00100018779	PDCD11	99	43.621	Heterocephalus_glaber_male
ENSPREG00000000475	pdcd11	100	68.129	ENSHCOG00000016006	pdcd11	100	67.947	Hippocampus_comes
ENSPREG00000000475	pdcd11	63	51.874	ENSIPUG00000015102	pdcd11	99	54.624	Ictalurus_punctatus
ENSPREG00000000475	pdcd11	99	44.148	ENSSTOG00000014553	PDCD11	99	44.060	Ictidomys_tridecemlineatus
ENSPREG00000000475	pdcd11	99	44.456	ENSJJAG00000015523	Pdcd11	99	44.789	Jaculus_jaculus
ENSPREG00000000475	pdcd11	51	68.147	ENSKMAG00000021182	pdcd11	99	68.147	Kryptolebias_marmoratus
ENSPREG00000000475	pdcd11	99	54.276	ENSLOCG00000011818	pdcd11	99	54.002	Lepisosteus_oculatus
ENSPREG00000000475	pdcd11	99	45.008	ENSLAFG00000008398	PDCD11	99	44.492	Loxodonta_africana
ENSPREG00000000475	pdcd11	99	44.368	ENSMFAG00000044058	PDCD11	99	44.149	Macaca_fascicularis
ENSPREG00000000475	pdcd11	99	44.368	ENSMMUG00000007058	PDCD11	99	44.149	Macaca_mulatta
ENSPREG00000000475	pdcd11	99	44.374	ENSMNEG00000040726	PDCD11	99	44.155	Macaca_nemestrina
ENSPREG00000000475	pdcd11	99	44.762	ENSMLEG00000040978	PDCD11	99	44.540	Mandrillus_leucophaeus
ENSPREG00000000475	pdcd11	100	72.847	ENSMAMG00000009572	pdcd11	100	72.558	Mastacembelus_armatus
ENSPREG00000000475	pdcd11	99	72.418	ENSMZEG00005008949	pdcd11	99	72.372	Maylandia_zebra
ENSPREG00000000475	pdcd11	99	45.088	ENSMGAG00000010482	PDCD11	99	45.532	Meleagris_gallopavo
ENSPREG00000000475	pdcd11	89	47.162	ENSMAUG00000014924	Pdcd11	96	47.903	Mesocricetus_auratus
ENSPREG00000000475	pdcd11	99	45.343	ENSMICG00000012421	PDCD11	99	45.072	Microcebus_murinus
ENSPREG00000000475	pdcd11	99	44.141	ENSMOCG00000021792	Pdcd11	99	44.558	Microtus_ochrogaster
ENSPREG00000000475	pdcd11	99	59.631	ENSMMOG00000007572	pdcd11	97	68.757	Mola_mola
ENSPREG00000000475	pdcd11	99	48.958	ENSMODG00000011077	PDCD11	99	41.693	Monodelphis_domestica
ENSPREG00000000475	pdcd11	100	59.706	ENSMALG00000003859	pdcd11	98	69.432	Monopterus_albus
ENSPREG00000000475	pdcd11	99	43.420	MGP_CAROLIEiJ_G0023050	Pdcd11	99	43.185	Mus_caroli
ENSPREG00000000475	pdcd11	99	43.397	ENSMUSG00000025047	Pdcd11	99	43.383	Mus_musculus
ENSPREG00000000475	pdcd11	99	43.485	MGP_PahariEiJ_G0014540	Pdcd11	99	43.684	Mus_pahari
ENSPREG00000000475	pdcd11	99	43.673	MGP_SPRETEiJ_G0023971	Pdcd11	99	43.660	Mus_spretus
ENSPREG00000000475	pdcd11	99	44.758	ENSMPUG00000016829	PDCD11	99	44.995	Mustela_putorius_furo
ENSPREG00000000475	pdcd11	99	44.076	ENSMLUG00000004997	PDCD11	99	44.139	Myotis_lucifugus
ENSPREG00000000475	pdcd11	99	44.144	ENSNGAG00000018143	Pdcd11	99	44.214	Nannospalax_galili
ENSPREG00000000475	pdcd11	85	80.255	ENSNBRG00000021596	pdcd11	95	76.012	Neolamprologus_brichardi
ENSPREG00000000475	pdcd11	99	43.300	ENSNLEG00000026700	PDCD11	99	43.139	Nomascus_leucogenys
ENSPREG00000000475	pdcd11	76	67.111	ENSMEUG00000013719	-	61	67.111	Notamacropus_eugenii
ENSPREG00000000475	pdcd11	99	46.724	ENSOPRG00000010593	PDCD11	96	46.439	Ochotona_princeps
ENSPREG00000000475	pdcd11	99	43.687	ENSODEG00000008079	PDCD11	99	43.717	Octodon_degus
ENSPREG00000000475	pdcd11	99	72.982	ENSONIG00000018835	pdcd11	99	72.717	Oreochromis_niloticus
ENSPREG00000000475	pdcd11	99	43.841	ENSOANG00000001636	-	99	43.679	Ornithorhynchus_anatinus
ENSPREG00000000475	pdcd11	99	43.981	ENSOCUG00000006312	PDCD11	99	44.004	Oryctolagus_cuniculus
ENSPREG00000000475	pdcd11	100	70.904	ENSORLG00020003642	pdcd11	100	70.511	Oryzias_latipes_hni
ENSPREG00000000475	pdcd11	100	70.943	ENSORLG00015001618	pdcd11	100	70.533	Oryzias_latipes_hsok
ENSPREG00000000475	pdcd11	65	70.802	ENSOMEG00000010904	pdcd11	98	70.802	Oryzias_melastigma
ENSPREG00000000475	pdcd11	99	44.699	ENSOGAG00000008683	PDCD11	99	44.616	Otolemur_garnettii
ENSPREG00000000475	pdcd11	99	44.074	ENSOARG00000003719	PDCD11	99	43.926	Ovis_aries
ENSPREG00000000475	pdcd11	99	44.490	ENSPPAG00000024593	PDCD11	99	47.040	Pan_paniscus
ENSPREG00000000475	pdcd11	99	44.527	ENSPPRG00000015133	PDCD11	99	44.309	Panthera_pardus
ENSPREG00000000475	pdcd11	99	44.527	ENSPTIG00000011433	PDCD11	99	44.309	Panthera_tigris_altaica
ENSPREG00000000475	pdcd11	99	44.468	ENSPTRG00000002911	PDCD11	99	44.202	Pan_troglodytes
ENSPREG00000000475	pdcd11	99	44.633	ENSPANG00000020959	PDCD11	99	44.315	Papio_anubis
ENSPREG00000000475	pdcd11	99	54.054	ENSPKIG00000000973	pdcd11	99	53.901	Paramormyrops_kingsleyae
ENSPREG00000000475	pdcd11	78	44.105	ENSPSIG00000005102	PDCD11	95	44.183	Pelodiscus_sinensis
ENSPREG00000000475	pdcd11	77	83.861	ENSPMGG00000007289	pdcd11	100	83.178	Periophthalmus_magnuspinnatus
ENSPREG00000000475	pdcd11	99	44.019	ENSPEMG00000010315	Pdcd11	99	44.019	Peromyscus_maniculatus_bairdii
ENSPREG00000000475	pdcd11	99	40.924	ENSPMAG00000003098	pdcd11	99	41.052	Petromyzon_marinus
ENSPREG00000000475	pdcd11	100	43.424	ENSPCIG00000001118	PDCD11	100	43.462	Phascolarctos_cinereus
ENSPREG00000000475	pdcd11	100	95.746	ENSPFOG00000006012	pdcd11	100	95.746	Poecilia_formosa
ENSPREG00000000475	pdcd11	98	89.481	ENSPLAG00000014494	pdcd11	100	89.037	Poecilia_latipinna
ENSPREG00000000475	pdcd11	98	75.766	ENSPMEG00000018177	pdcd11	98	90.066	Poecilia_mexicana
ENSPREG00000000475	pdcd11	99	43.657	ENSPPYG00000002621	PDCD11	99	43.373	Pongo_abelii
ENSPREG00000000475	pdcd11	63	51.544	ENSPCAG00000011663	PDCD11	65	51.638	Procavia_capensis
ENSPREG00000000475	pdcd11	90	49.533	ENSPCOG00000023327	PDCD11	99	40.491	Propithecus_coquereli
ENSPREG00000000475	pdcd11	99	44.091	ENSPVAG00000004176	PDCD11	99	43.932	Pteropus_vampyrus
ENSPREG00000000475	pdcd11	99	72.363	ENSPNYG00000003979	pdcd11	99	72.277	Pundamilia_nyererei
ENSPREG00000000475	pdcd11	95	55.549	ENSPNAG00000017225	pdcd11	100	55.950	Pygocentrus_nattereri
ENSPREG00000000475	pdcd11	99	43.529	ENSRNOG00000020304	Pdcd11	99	43.160	Rattus_norvegicus
ENSPREG00000000475	pdcd11	99	44.421	ENSRBIG00000011889	PDCD11	99	44.043	Rhinopithecus_bieti
ENSPREG00000000475	pdcd11	99	44.421	ENSRROG00000030483	PDCD11	99	44.202	Rhinopithecus_roxellana
ENSPREG00000000475	pdcd11	96	32.796	YMR229C	-	94	32.796	Saccharomyces_cerevisiae
ENSPREG00000000475	pdcd11	99	43.931	ENSSBOG00000030308	PDCD11	99	43.931	Saimiri_boliviensis_boliviensis
ENSPREG00000000475	pdcd11	99	42.546	ENSSHAG00000018258	PDCD11	99	42.789	Sarcophilus_harrisii
ENSPREG00000000475	pdcd11	100	54.526	ENSSFOG00015003881	pdcd11	100	54.226	Scleropages_formosus
ENSPREG00000000475	pdcd11	100	72.402	ENSSMAG00000006612	pdcd11	100	72.064	Scophthalmus_maximus
ENSPREG00000000475	pdcd11	98	68.467	ENSSDUG00000021302	pdcd11	99	68.750	Seriola_dumerili
ENSPREG00000000475	pdcd11	50	70.537	ENSSLDG00000010228	pdcd11	99	70.175	Seriola_lalandi_dorsalis
ENSPREG00000000475	pdcd11	80	63.265	ENSSARG00000002540	PDCD11	70	63.265	Sorex_araneus
ENSPREG00000000475	pdcd11	97	72.100	ENSSPAG00000017558	pdcd11	100	72.100	Stegastes_partitus
ENSPREG00000000475	pdcd11	99	44.197	ENSSSCG00000010599	PDCD11	99	44.580	Sus_scrofa
ENSPREG00000000475	pdcd11	70	65.265	ENSTRUG00000014291	pdcd11	100	65.082	Takifugu_rubripes
ENSPREG00000000475	pdcd11	99	65.894	ENSTNIG00000012085	pdcd11	99	65.580	Tetraodon_nigroviridis
ENSPREG00000000475	pdcd11	99	42.487	ENSTBEG00000001893	PDCD11	96	60.458	Tupaia_belangeri
ENSPREG00000000475	pdcd11	96	66.216	ENSTTRG00000003356	PDCD11	93	43.360	Tursiops_truncatus
ENSPREG00000000475	pdcd11	99	44.557	ENSUAMG00000018015	PDCD11	99	44.503	Ursus_americanus
ENSPREG00000000475	pdcd11	99	43.697	ENSUMAG00000023567	PDCD11	99	43.605	Ursus_maritimus
ENSPREG00000000475	pdcd11	71	51.724	ENSVPAG00000007405	PDCD11	78	51.724	Vicugna_pacos
ENSPREG00000000475	pdcd11	99	44.894	ENSVVUG00000004457	PDCD11	99	44.462	Vulpes_vulpes
ENSPREG00000000475	pdcd11	100	45.811	ENSXETG00000009482	pdcd11	99	45.734	Xenopus_tropicalis
ENSPREG00000000475	pdcd11	100	74.614	ENSXCOG00000012420	pdcd11	100	66.303	Xiphophorus_couchianus
ENSPREG00000000475	pdcd11	100	92.099	ENSXMAG00000004638	pdcd11	100	92.099	Xiphophorus_maculatus