EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000652 (Gene tree)
Gene ID: 103458603
Gene Symbol: SCAF8
Alias: -
Full Name: SR-related CTD associated factor 8
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 25578 bases
Position: chrLG22:13102759-13128336
Accession: 103458603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000829	RRM_1	PF00076.22	6.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000000865	SCAF8-201	4149	XM_008399537	ENSPREP00000000829	1382 (aa)	XP_008397759	UPI0004A412AC

Gene Model

Click here to download ENSPREG00000000652's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000652's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000652	SCAF8	77	68.557	ENSG00000213079	SCAF8	85	69.051	Homo_sapiens
ENSPREG00000000652	SCAF8	100	81.387	ENSAPOG00000015527	SCAF8	100	81.387	Acanthochromis_polyacanthus
ENSPREG00000000652	SCAF8	77	66.947	ENSAMEG00000007583	SCAF8	83	67.548	Ailuropoda_melanoleuca
ENSPREG00000000652	SCAF8	100	80.479	ENSAOCG00000002421	SCAF8	100	80.663	Amphiprion_ocellaris
ENSPREG00000000652	SCAF8	75	81.340	ENSAPEG00000020115	SCAF8	68	65.848	Amphiprion_percula
ENSPREG00000000652	SCAF8	77	82.597	ENSATEG00000006959	SCAF8	95	82.456	Anabas_testudineus
ENSPREG00000000652	SCAF8	71	76.590	ENSAPLG00000005765	SCAF8	87	67.264	Anas_platyrhynchos
ENSPREG00000000652	SCAF8	77	68.557	ENSANAG00000036184	SCAF8	85	69.051	Aotus_nancymaae
ENSPREG00000000652	SCAF8	100	77.605	ENSACLG00000018828	SCAF8	100	77.021	Astatotilapia_calliptera
ENSPREG00000000652	SCAF8	77	68.550	ENSBTAG00000031917	SCAF8	86	69.165	Bos_taurus
ENSPREG00000000652	SCAF8	77	68.642	ENSCJAG00000012631	SCAF8	83	67.389	Callithrix_jacchus
ENSPREG00000000652	SCAF8	77	68.539	ENSCAFG00000000570	SCAF8	85	69.164	Canis_familiaris
ENSPREG00000000652	SCAF8	77	68.539	ENSCAFG00020015048	SCAF8	84	69.164	Canis_lupus_dingo
ENSPREG00000000652	SCAF8	77	68.550	ENSCHIG00000025041	SCAF8	86	69.165	Capra_hircus
ENSPREG00000000652	SCAF8	77	67.275	ENSTSYG00000010991	SCAF8	85	66.947	Carlito_syrichta
ENSPREG00000000652	SCAF8	58	70.667	ENSCAPG00000003300	SCAF8	71	70.667	Cavia_aperea
ENSPREG00000000652	SCAF8	77	59.679	ENSCPOG00000030311	-	54	55.114	Cavia_porcellus
ENSPREG00000000652	SCAF8	77	58.437	ENSCPOG00000022216	-	86	58.065	Cavia_porcellus
ENSPREG00000000652	SCAF8	77	68.434	ENSCCAG00000024952	SCAF8	85	69.051	Cebus_capucinus
ENSPREG00000000652	SCAF8	77	68.681	ENSCATG00000035361	SCAF8	85	69.174	Cercocebus_atys
ENSPREG00000000652	SCAF8	77	67.497	ENSCLAG00000004910	SCAF8	86	67.995	Chinchilla_lanigera
ENSPREG00000000652	SCAF8	77	66.947	ENSCSAG00000013430	SCAF8	86	67.428	Chlorocebus_sabaeus
ENSPREG00000000652	SCAF8	75	72.490	ENSCPBG00000016330	SCAF8	81	69.716	Chrysemys_picta_bellii
ENSPREG00000000652	SCAF8	77	68.681	ENSCANG00000039499	SCAF8	85	69.039	Colobus_angolensis_palliatus
ENSPREG00000000652	SCAF8	77	67.176	ENSCGRG00001020167	Scaf8	92	67.262	Cricetulus_griseus_chok1gshd
ENSPREG00000000652	SCAF8	77	66.944	ENSCGRG00000004120	Scaf8	92	67.182	Cricetulus_griseus_crigri
ENSPREG00000000652	SCAF8	100	74.221	ENSCSEG00000000043	-	100	74.061	Cynoglossus_semilaevis
ENSPREG00000000652	SCAF8	96	85.213	ENSCVAG00000000925	SCAF8	99	85.063	Cyprinodon_variegatus
ENSPREG00000000652	SCAF8	74	65.513	ENSDNOG00000025271	SCAF8	92	65.513	Dasypus_novemcinctus
ENSPREG00000000652	SCAF8	77	68.905	ENSDORG00000006391	Scaf8	86	69.154	Dipodomys_ordii
ENSPREG00000000652	SCAF8	77	68.596	ENSEASG00005018879	SCAF8	86	69.212	Equus_asinus_asinus
ENSPREG00000000652	SCAF8	77	68.804	ENSECAG00000005540	SCAF8	86	69.420	Equus_caballus
ENSPREG00000000652	SCAF8	76	71.053	ENSELUG00000002779	SCAF8	100	61.857	Esox_lucius
ENSPREG00000000652	SCAF8	77	70.200	ENSFCAG00000023424	SCAF8	85	70.324	Felis_catus
ENSPREG00000000652	SCAF8	71	76.411	ENSFALG00000012433	SCAF8	85	68.395	Ficedula_albicollis
ENSPREG00000000652	SCAF8	77	67.875	ENSFDAG00000010335	SCAF8	91	67.901	Fukomys_damarensis
ENSPREG00000000652	SCAF8	100	89.394	ENSFHEG00000008284	SCAF8	100	89.971	Fundulus_heteroclitus
ENSPREG00000000652	SCAF8	64	78.004	ENSGMOG00000018812	SCAF8	83	78.004	Gadus_morhua
ENSPREG00000000652	SCAF8	75	72.099	ENSGALG00000013635	SCAF8	87	66.862	Gallus_gallus
ENSPREG00000000652	SCAF8	100	95.307	ENSGAFG00000018033	SCAF8	100	95.812	Gambusia_affinis
ENSPREG00000000652	SCAF8	77	77.945	ENSGACG00000006909	SCAF8	99	78.044	Gasterosteus_aculeatus
ENSPREG00000000652	SCAF8	77	68.557	ENSGGOG00000008645	SCAF8	85	69.051	Gorilla_gorilla
ENSPREG00000000652	SCAF8	100	77.605	ENSHBUG00000019537	SCAF8	100	76.879	Haplochromis_burtoni
ENSPREG00000000652	SCAF8	77	67.901	ENSHGLG00000003619	SCAF8	86	68.395	Heterocephalus_glaber_female
ENSPREG00000000652	SCAF8	77	67.750	ENSHGLG00100004708	SCAF8	86	68.250	Heterocephalus_glaber_male
ENSPREG00000000652	SCAF8	77	68.500	ENSSTOG00000026043	SCAF8	85	69.000	Ictidomys_tridecemlineatus
ENSPREG00000000652	SCAF8	77	68.120	ENSJJAG00000020480	Scaf8	85	68.742	Jaculus_jaculus
ENSPREG00000000652	SCAF8	100	82.655	ENSKMAG00000012767	SCAF8	100	82.441	Kryptolebias_marmoratus
ENSPREG00000000652	SCAF8	83	94.403	ENSLBEG00000012484	-	92	91.611	Labrus_bergylta
ENSPREG00000000652	SCAF8	78	64.192	ENSLOCG00000016856	SCAF8	92	64.456	Lepisosteus_oculatus
ENSPREG00000000652	SCAF8	69	76.981	ENSLAFG00000000022	SCAF8	86	68.719	Loxodonta_africana
ENSPREG00000000652	SCAF8	77	68.681	ENSMFAG00000032738	SCAF8	85	69.174	Macaca_fascicularis
ENSPREG00000000652	SCAF8	77	68.681	ENSMMUG00000015163	SCAF8	85	69.174	Macaca_mulatta
ENSPREG00000000652	SCAF8	77	68.681	ENSMNEG00000043466	SCAF8	85	69.174	Macaca_nemestrina
ENSPREG00000000652	SCAF8	77	68.664	ENSMLEG00000034845	SCAF8	85	69.164	Mandrillus_leucophaeus
ENSPREG00000000652	SCAF8	97	75.146	ENSMAMG00000009457	SCAF8	100	75.146	Mastacembelus_armatus
ENSPREG00000000652	SCAF8	100	77.605	ENSMZEG00005005698	SCAF8	100	76.879	Maylandia_zebra
ENSPREG00000000652	SCAF8	77	69.098	ENSMGAG00000012762	SCAF8	93	68.727	Meleagris_gallopavo
ENSPREG00000000652	SCAF8	77	67.262	ENSMAUG00000009513	Scaf8	92	67.500	Mesocricetus_auratus
ENSPREG00000000652	SCAF8	77	65.367	ENSMICG00000028965	SCAF8	89	65.826	Microcebus_murinus
ENSPREG00000000652	SCAF8	77	66.706	ENSMOCG00000014950	Scaf8	88	66.941	Microtus_ochrogaster
ENSPREG00000000652	SCAF8	98	73.063	ENSMMOG00000002216	SCAF8	99	72.556	Mola_mola
ENSPREG00000000652	SCAF8	77	70.125	ENSMODG00000008301	SCAF8	85	70.375	Monodelphis_domestica
ENSPREG00000000652	SCAF8	100	77.935	ENSMALG00000011584	SCAF8	100	77.691	Monopterus_albus
ENSPREG00000000652	SCAF8	77	68.143	MGP_CAROLIEiJ_G0021016	Scaf8	86	68.635	Mus_caroli
ENSPREG00000000652	SCAF8	77	68.143	ENSMUSG00000046201	Scaf8	93	68.635	Mus_musculus
ENSPREG00000000652	SCAF8	77	68.635	MGP_PahariEiJ_G0023334	Scaf8	93	69.127	Mus_pahari
ENSPREG00000000652	SCAF8	77	66.587	ENSMPUG00000001974	SCAF8	86	67.188	Mustela_putorius_furo
ENSPREG00000000652	SCAF8	77	67.778	ENSMLUG00000029190	SCAF8	90	68.395	Myotis_lucifugus
ENSPREG00000000652	SCAF8	77	68.389	ENSNGAG00000012332	Scaf8	86	68.881	Nannospalax_galili
ENSPREG00000000652	SCAF8	83	78.222	ENSNBRG00000009067	SCAF8	99	79.633	Neolamprologus_brichardi
ENSPREG00000000652	SCAF8	77	66.708	ENSNLEG00000015509	SCAF8	85	67.040	Nomascus_leucogenys
ENSPREG00000000652	SCAF8	52	74.227	ENSOPRG00000018413	-	66	74.227	Ochotona_princeps
ENSPREG00000000652	SCAF8	77	68.187	ENSODEG00000007296	SCAF8	85	68.681	Octodon_degus
ENSPREG00000000652	SCAF8	82	84.116	ENSONIG00000008119	SCAF8	98	81.953	Oreochromis_niloticus
ENSPREG00000000652	SCAF8	77	68.625	ENSOCUG00000026063	SCAF8	85	69.125	Oryctolagus_cuniculus
ENSPREG00000000652	SCAF8	100	76.541	ENSORLG00000017358	SCAF8	100	76.045	Oryzias_latipes
ENSPREG00000000652	SCAF8	100	76.329	ENSORLG00020002214	SCAF8	100	75.833	Oryzias_latipes_hni
ENSPREG00000000652	SCAF8	100	76.541	ENSORLG00015015779	SCAF8	100	76.329	Oryzias_latipes_hsok
ENSPREG00000000652	SCAF8	100	77.369	ENSOMEG00000015471	SCAF8	100	77.952	Oryzias_melastigma
ENSPREG00000000652	SCAF8	77	66.707	ENSOGAG00000034223	SCAF8	83	67.188	Otolemur_garnettii
ENSPREG00000000652	SCAF8	77	68.447	ENSOARG00000004159	SCAF8	86	69.068	Ovis_aries
ENSPREG00000000652	SCAF8	77	68.557	ENSPPAG00000039826	SCAF8	85	69.051	Pan_paniscus
ENSPREG00000000652	SCAF8	77	69.174	ENSPPRG00000023175	SCAF8	85	69.790	Panthera_pardus
ENSPREG00000000652	SCAF8	77	69.039	ENSPTIG00000014836	SCAF8	85	69.663	Panthera_tigris_altaica
ENSPREG00000000652	SCAF8	77	68.681	ENSPTRG00000018727	SCAF8	85	69.174	Pan_troglodytes
ENSPREG00000000652	SCAF8	77	68.681	ENSPANG00000017489	SCAF8	85	66.338	Papio_anubis
ENSPREG00000000652	SCAF8	78	69.651	ENSPKIG00000021212	SCAF8	93	70.070	Paramormyrops_kingsleyae
ENSPREG00000000652	SCAF8	60	74.040	ENSPSIG00000008614	SCAF8	70	64.829	Pelodiscus_sinensis
ENSPREG00000000652	SCAF8	77	66.190	ENSPEMG00000010531	Scaf8	88	66.429	Peromyscus_maniculatus_bairdii
ENSPREG00000000652	SCAF8	77	70.617	ENSPCIG00000001141	SCAF8	85	70.864	Phascolarctos_cinereus
ENSPREG00000000652	SCAF8	100	98.046	ENSPFOG00000004176	SCAF8	100	98.046	Poecilia_formosa
ENSPREG00000000652	SCAF8	100	98.046	ENSPLAG00000021432	SCAF8	100	98.046	Poecilia_latipinna
ENSPREG00000000652	SCAF8	100	98.480	ENSPMEG00000007591	SCAF8	100	98.480	Poecilia_mexicana
ENSPREG00000000652	SCAF8	77	67.405	ENSPPYG00000017121	SCAF8	85	67.528	Pongo_abelii
ENSPREG00000000652	SCAF8	69	79.599	ENSPCAG00000013044	SCAF8	80	79.766	Procavia_capensis
ENSPREG00000000652	SCAF8	77	66.588	ENSPCOG00000002067	SCAF8	87	66.905	Propithecus_coquereli
ENSPREG00000000652	SCAF8	77	68.696	ENSPVAG00000005582	SCAF8	87	69.231	Pteropus_vampyrus
ENSPREG00000000652	SCAF8	100	77.605	ENSPNYG00000007277	SCAF8	100	77.021	Pundamilia_nyererei
ENSPREG00000000652	SCAF8	81	71.684	ENSPNAG00000024740	SCAF8	86	72.829	Pygocentrus_nattereri
ENSPREG00000000652	SCAF8	77	71.204	ENSRNOG00000016919	Scaf8	93	68.758	Rattus_norvegicus
ENSPREG00000000652	SCAF8	77	68.681	ENSRBIG00000035769	SCAF8	85	69.174	Rhinopithecus_bieti
ENSPREG00000000652	SCAF8	77	68.681	ENSRROG00000013580	SCAF8	85	69.174	Rhinopithecus_roxellana
ENSPREG00000000652	SCAF8	77	68.557	ENSSBOG00000027023	SCAF8	92	69.051	Saimiri_boliviensis_boliviensis
ENSPREG00000000652	SCAF8	77	69.383	ENSSHAG00000009915	SCAF8	86	69.753	Sarcophilus_harrisii
ENSPREG00000000652	SCAF8	77	64.385	ENSSFOG00015009481	SCAF8	56	55.096	Scleropages_formosus
ENSPREG00000000652	SCAF8	77	84.995	ENSSMAG00000008275	SCAF8	100	76.108	Scophthalmus_maximus
ENSPREG00000000652	SCAF8	77	69.479	ENSSPUG00000015219	SCAF8	82	69.479	Sphenodon_punctatus
ENSPREG00000000652	SCAF8	77	66.392	ENSSSCG00000004070	SCAF8	86	69.297	Sus_scrofa
ENSPREG00000000652	SCAF8	77	69.260	ENSTGUG00000011151	SCAF8	93	69.636	Taeniopygia_guttata
ENSPREG00000000652	SCAF8	100	72.370	ENSTRUG00000009243	SCAF8	100	71.510	Takifugu_rubripes
ENSPREG00000000652	SCAF8	77	78.636	ENSTNIG00000016885	SCAF8	99	78.428	Tetraodon_nigroviridis
ENSPREG00000000652	SCAF8	77	66.792	ENSTTRG00000014538	SCAF8	86	67.915	Tursiops_truncatus
ENSPREG00000000652	SCAF8	77	68.842	ENSUAMG00000024736	SCAF8	85	69.327	Ursus_americanus
ENSPREG00000000652	SCAF8	76	68.488	ENSUMAG00000013404	SCAF8	85	69.123	Ursus_maritimus
ENSPREG00000000652	SCAF8	77	68.539	ENSVVUG00000007532	SCAF8	86	68.957	Vulpes_vulpes
ENSPREG00000000652	SCAF8	71	70.665	ENSXETG00000013132	scaf8	80	68.182	Xenopus_tropicalis
ENSPREG00000000652	SCAF8	100	97.250	ENSXMAG00000019192	SCAF8	100	97.250	Xiphophorus_maculatus