EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000713 (Gene tree)
Gene ID: 103465093
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 4547 bases
Position: chrLG5:18930566-18935112
Accession: 103465093
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000944	R3H	PF01424.22	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000000983	-	1353	XM_008409647	ENSPREP00000000944	450 (aa)	XP_008407869	-

Gene Model

Click here to download ENSPREG00000000713's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000713's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000713	r3hcc1	90	33.721	ENSG00000104679	R3HCC1	100	41.860	Homo_sapiens
ENSPREG00000000713	r3hcc1	91	56.068	ENSAPOG00000003616	r3hcc1	93	56.522	Acanthochromis_polyacanthus
ENSPREG00000000713	r3hcc1	91	36.404	ENSAMEG00000002963	R3HCC1	89	35.730	Ailuropoda_melanoleuca
ENSPREG00000000713	r3hcc1	92	53.778	ENSACIG00000017144	r3hcc1	98	60.248	Amphilophus_citrinellus
ENSPREG00000000713	r3hcc1	90	57.561	ENSAOCG00000003945	r3hcc1	100	58.010	Amphiprion_ocellaris
ENSPREG00000000713	r3hcc1	90	57.767	ENSAPEG00000003613	r3hcc1	100	58.010	Amphiprion_percula
ENSPREG00000000713	r3hcc1	84	60.102	ENSATEG00000023860	r3hcc1	98	61.654	Anabas_testudineus
ENSPREG00000000713	r3hcc1	90	35.000	ENSACAG00000016627	R3HCC1	96	35.281	Anolis_carolinensis
ENSPREG00000000713	r3hcc1	90	34.404	ENSANAG00000036169	R3HCC1	96	33.806	Aotus_nancymaae
ENSPREG00000000713	r3hcc1	90	34.491	ENSBTAG00000025830	R3HCC1	93	34.491	Bos_taurus
ENSPREG00000000713	r3hcc1	90	34.633	ENSCJAG00000020118	R3HCC1	96	33.985	Callithrix_jacchus
ENSPREG00000000713	r3hcc1	65	44.371	ENSCAFG00000009210	R3HCC1	92	36.259	Canis_familiaris
ENSPREG00000000713	r3hcc1	77	31.830	ENSCAFG00020012870	R3HCC1	85	34.133	Canis_lupus_dingo
ENSPREG00000000713	r3hcc1	90	33.949	ENSCHIG00000009107	R3HCC1	97	34.404	Capra_hircus
ENSPREG00000000713	r3hcc1	90	35.023	ENSTSYG00000000511	R3HCC1	75	35.023	Carlito_syrichta
ENSPREG00000000713	r3hcc1	90	32.909	ENSCPOG00000009696	R3HCC1	61	44.681	Cavia_porcellus
ENSPREG00000000713	r3hcc1	90	34.390	ENSCCAG00000037811	R3HCC1	96	34.878	Cebus_capucinus
ENSPREG00000000713	r3hcc1	90	34.568	ENSCATG00000032971	R3HCC1	96	34.550	Cercocebus_atys
ENSPREG00000000713	r3hcc1	90	35.714	ENSCLAG00000015556	R3HCC1	81	35.780	Chinchilla_lanigera
ENSPREG00000000713	r3hcc1	90	33.560	ENSCSAG00000016250	R3HCC1	89	34.651	Chlorocebus_sabaeus
ENSPREG00000000713	r3hcc1	90	32.723	ENSCHOG00000000396	R3HCC1	93	33.410	Choloepus_hoffmanni
ENSPREG00000000713	r3hcc1	90	35.047	ENSCANG00000029441	R3HCC1	96	35.036	Colobus_angolensis_palliatus
ENSPREG00000000713	r3hcc1	66	42.949	ENSCGRG00001014977	R3hcc1	96	31.760	Cricetulus_griseus_chok1gshd
ENSPREG00000000713	r3hcc1	66	42.949	ENSCGRG00000004454	R3hcc1	96	31.760	Cricetulus_griseus_crigri
ENSPREG00000000713	r3hcc1	90	57.656	ENSCSEG00000005748	r3hcc1	99	57.656	Cynoglossus_semilaevis
ENSPREG00000000713	r3hcc1	77	66.102	ENSCVAG00000002640	r3hcc1	96	66.102	Cyprinodon_variegatus
ENSPREG00000000713	r3hcc1	91	41.608	ENSDARG00000099593	r3hcc1	99	41.608	Danio_rerio
ENSPREG00000000713	r3hcc1	90	34.096	ENSDNOG00000007168	R3HCC1	89	34.096	Dasypus_novemcinctus
ENSPREG00000000713	r3hcc1	93	32.708	ENSDORG00000026365	R3hcc1	99	33.264	Dipodomys_ordii
ENSPREG00000000713	r3hcc1	90	30.505	ENSETEG00000001147	R3HCC1	94	30.963	Echinops_telfairi
ENSPREG00000000713	r3hcc1	90	34.312	ENSEASG00005018782	R3HCC1	78	35.682	Equus_asinus_asinus
ENSPREG00000000713	r3hcc1	90	36.364	ENSECAG00000025013	R3HCC1	95	35.730	Equus_caballus
ENSPREG00000000713	r3hcc1	90	34.676	ENSEEUG00000011918	R3HCC1	93	36.156	Erinaceus_europaeus
ENSPREG00000000713	r3hcc1	86	46.247	ENSELUG00000023650	r3hcc1	98	46.324	Esox_lucius
ENSPREG00000000713	r3hcc1	90	36.386	ENSFCAG00000012395	R3HCC1	93	35.104	Felis_catus
ENSPREG00000000713	r3hcc1	89	37.750	ENSGMOG00000017590	-	98	38.000	Gadus_morhua
ENSPREG00000000713	r3hcc1	99	90.646	ENSGAFG00000008747	-	99	90.646	Gambusia_affinis
ENSPREG00000000713	r3hcc1	91	56.250	ENSGACG00000008447	r3hcc1	96	56.010	Gasterosteus_aculeatus
ENSPREG00000000713	r3hcc1	90	34.307	ENSGGOG00000013817	R3HCC1	96	33.820	Gorilla_gorilla
ENSPREG00000000713	r3hcc1	67	84.337	ENSHBUG00000022250	-	88	84.337	Haplochromis_burtoni
ENSPREG00000000713	r3hcc1	91	34.884	ENSHGLG00000010517	R3HCC1	90	34.884	Heterocephalus_glaber_female
ENSPREG00000000713	r3hcc1	91	34.884	ENSHGLG00100006388	R3HCC1	90	34.884	Heterocephalus_glaber_male
ENSPREG00000000713	r3hcc1	92	52.871	ENSHCOG00000011745	r3hcc1	95	54.137	Hippocampus_comes
ENSPREG00000000713	r3hcc1	91	47.596	ENSIPUG00000024504	r3hcc1	87	47.129	Ictalurus_punctatus
ENSPREG00000000713	r3hcc1	66	43.791	ENSSTOG00000027130	R3HCC1	65	46.099	Ictidomys_tridecemlineatus
ENSPREG00000000713	r3hcc1	87	66.834	ENSKMAG00000000286	r3hcc1	100	66.337	Kryptolebias_marmoratus
ENSPREG00000000713	r3hcc1	91	34.753	ENSLACG00000011894	R3HCC1	98	34.607	Latimeria_chalumnae
ENSPREG00000000713	r3hcc1	96	43.172	ENSLOCG00000015442	r3hcc1	99	42.952	Lepisosteus_oculatus
ENSPREG00000000713	r3hcc1	64	46.809	ENSLAFG00000016137	R3HCC1	58	46.809	Loxodonta_africana
ENSPREG00000000713	r3hcc1	90	34.815	ENSMFAG00000032894	R3HCC1	96	34.793	Macaca_fascicularis
ENSPREG00000000713	r3hcc1	90	33.560	ENSMMUG00000016655	R3HCC1	96	34.793	Macaca_mulatta
ENSPREG00000000713	r3hcc1	90	35.036	ENSMNEG00000043283	R3HCC1	96	35.036	Macaca_nemestrina
ENSPREG00000000713	r3hcc1	90	35.766	ENSMLEG00000030147	R3HCC1	96	35.766	Mandrillus_leucophaeus
ENSPREG00000000713	r3hcc1	87	58.416	ENSMAMG00000018146	r3hcc1	100	59.901	Mastacembelus_armatus
ENSPREG00000000713	r3hcc1	90	34.426	ENSMGAG00000001356	R3HCC1	89	33.958	Meleagris_gallopavo
ENSPREG00000000713	r3hcc1	90	33.476	ENSMAUG00000016096	R3hcc1	96	33.406	Mesocricetus_auratus
ENSPREG00000000713	r3hcc1	90	35.593	ENSMICG00000011146	R3HCC1	96	35.593	Microcebus_murinus
ENSPREG00000000713	r3hcc1	64	43.448	ENSMOCG00000018508	R3hcc1	96	32.632	Microtus_ochrogaster
ENSPREG00000000713	r3hcc1	87	55.690	ENSMALG00000000731	r3hcc1	100	58.477	Monopterus_albus
ENSPREG00000000713	r3hcc1	64	41.379	MGP_CAROLIEiJ_G0019467	R3hcc1	97	32.068	Mus_caroli
ENSPREG00000000713	r3hcc1	64	41.216	ENSMUSG00000034194	R3hcc1	97	31.646	Mus_musculus
ENSPREG00000000713	r3hcc1	64	42.466	MGP_PahariEiJ_G0030484	R3hcc1	58	42.466	Mus_pahari
ENSPREG00000000713	r3hcc1	64	41.216	MGP_SPRETEiJ_G0020359	R3hcc1	97	31.447	Mus_spretus
ENSPREG00000000713	r3hcc1	90	35.227	ENSMPUG00000003457	R3HCC1	84	34.169	Mustela_putorius_furo
ENSPREG00000000713	r3hcc1	90	33.628	ENSMLUG00000000266	R3HCC1	89	34.862	Myotis_lucifugus
ENSPREG00000000713	r3hcc1	77	82.143	ENSNBRG00000016975	-	82	82.143	Neolamprologus_brichardi
ENSPREG00000000713	r3hcc1	84	31.436	ENSNLEG00000015944	R3HCC1	85	31.421	Nomascus_leucogenys
ENSPREG00000000713	r3hcc1	92	36.156	ENSMEUG00000010587	R3HCC1	98	36.384	Notamacropus_eugenii
ENSPREG00000000713	r3hcc1	90	34.977	ENSOPRG00000013390	R3HCC1	92	33.962	Ochotona_princeps
ENSPREG00000000713	r3hcc1	90	33.478	ENSODEG00000007529	R3HCC1	97	33.547	Octodon_degus
ENSPREG00000000713	r3hcc1	90	35.461	ENSOANG00000013877	R3HCC1	94	35.915	Ornithorhynchus_anatinus
ENSPREG00000000713	r3hcc1	90	35.476	ENSOCUG00000023554	R3HCC1	83	35.499	Oryctolagus_cuniculus
ENSPREG00000000713	r3hcc1	87	52.405	ENSORLG00000016816	r3hcc1	100	51.899	Oryzias_latipes
ENSPREG00000000713	r3hcc1	87	51.899	ENSORLG00020012005	r3hcc1	100	51.392	Oryzias_latipes_hni
ENSPREG00000000713	r3hcc1	87	53.165	ENSORLG00015007018	r3hcc1	100	52.658	Oryzias_latipes_hsok
ENSPREG00000000713	r3hcc1	87	52.152	ENSOMEG00000000816	r3hcc1	100	52.152	Oryzias_melastigma
ENSPREG00000000713	r3hcc1	91	34.475	ENSOGAG00000001291	R3HCC1	90	36.073	Otolemur_garnettii
ENSPREG00000000713	r3hcc1	90	33.560	ENSOARG00000010146	R3HCC1	94	34.773	Ovis_aries
ENSPREG00000000713	r3hcc1	90	33.488	ENSPPAG00000033165	R3HCC1	96	33.732	Pan_paniscus
ENSPREG00000000713	r3hcc1	52	50.000	ENSPPRG00000002522	R3HCC1	97	35.185	Panthera_pardus
ENSPREG00000000713	r3hcc1	90	33.333	ENSPTRG00000020076	R3HCC1	96	33.493	Pan_troglodytes
ENSPREG00000000713	r3hcc1	90	34.550	ENSPANG00000000453	R3HCC1	96	34.550	Papio_anubis
ENSPREG00000000713	r3hcc1	82	45.989	ENSPKIG00000014426	-	93	45.968	Paramormyrops_kingsleyae
ENSPREG00000000713	r3hcc1	82	45.144	ENSPKIG00000020397	-	94	45.119	Paramormyrops_kingsleyae
ENSPREG00000000713	r3hcc1	90	35.845	ENSPSIG00000017664	R3HCC1	96	35.616	Pelodiscus_sinensis
ENSPREG00000000713	r3hcc1	64	57.333	ENSPMGG00000007792	r3hcc1	60	57.333	Periophthalmus_magnuspinnatus
ENSPREG00000000713	r3hcc1	69	43.624	ENSPEMG00000007118	R3hcc1	96	33.262	Peromyscus_maniculatus_bairdii
ENSPREG00000000713	r3hcc1	83	32.331	ENSPCIG00000022718	-	82	32.500	Phascolarctos_cinereus
ENSPREG00000000713	r3hcc1	99	94.432	ENSPFOG00000022301	r3hcc1	99	94.432	Poecilia_formosa
ENSPREG00000000713	r3hcc1	99	94.878	ENSPLAG00000010794	r3hcc1	99	94.878	Poecilia_latipinna
ENSPREG00000000713	r3hcc1	99	94.432	ENSPMEG00000022515	r3hcc1	99	94.432	Poecilia_mexicana
ENSPREG00000000713	r3hcc1	82	33.588	ENSPPYG00000018436	R3HCC1	96	33.842	Pongo_abelii
ENSPREG00000000713	r3hcc1	66	46.154	ENSPCAG00000012229	R3HCC1	67	46.154	Procavia_capensis
ENSPREG00000000713	r3hcc1	90	35.167	ENSPCOG00000027554	R3HCC1	96	35.109	Propithecus_coquereli
ENSPREG00000000713	r3hcc1	94	33.260	ENSPVAG00000009829	R3HCC1	95	34.004	Pteropus_vampyrus
ENSPREG00000000713	r3hcc1	88	48.492	ENSPNAG00000023875	r3hcc1	99	47.487	Pygocentrus_nattereri
ENSPREG00000000713	r3hcc1	90	34.550	ENSRBIG00000028045	R3HCC1	96	34.793	Rhinopithecus_bieti
ENSPREG00000000713	r3hcc1	90	34.550	ENSRROG00000031126	R3HCC1	96	34.793	Rhinopithecus_roxellana
ENSPREG00000000713	r3hcc1	90	33.871	ENSSBOG00000022590	R3HCC1	96	33.875	Saimiri_boliviensis_boliviensis
ENSPREG00000000713	r3hcc1	90	34.163	ENSSHAG00000016526	-	96	34.234	Sarcophilus_harrisii
ENSPREG00000000713	r3hcc1	76	56.044	ENSSFOG00015013507	r3hcc1	100	44.836	Scleropages_formosus
ENSPREG00000000713	r3hcc1	87	61.330	ENSSMAG00000008647	r3hcc1	100	61.330	Scophthalmus_maximus
ENSPREG00000000713	r3hcc1	92	64.720	ENSSDUG00000022786	r3hcc1	99	65.654	Seriola_dumerili
ENSPREG00000000713	r3hcc1	92	64.486	ENSSLDG00000019031	r3hcc1	99	65.421	Seriola_lalandi_dorsalis
ENSPREG00000000713	r3hcc1	90	59.135	ENSSPAG00000013497	r3hcc1	100	59.135	Stegastes_partitus
ENSPREG00000000713	r3hcc1	90	35.000	ENSSSCG00000039915	-	90	34.325	Sus_scrofa
ENSPREG00000000713	r3hcc1	93	30.508	ENSSSCG00000037347	-	92	31.435	Sus_scrofa
ENSPREG00000000713	r3hcc1	90	49.878	ENSTRUG00000015880	r3hcc1	99	49.389	Takifugu_rubripes
ENSPREG00000000713	r3hcc1	95	35.033	ENSTTRG00000012247	R3HCC1	98	34.286	Tursiops_truncatus
ENSPREG00000000713	r3hcc1	90	34.773	ENSUAMG00000007344	R3HCC1	96	34.773	Ursus_americanus
ENSPREG00000000713	r3hcc1	95	34.576	ENSVVUG00000005056	R3HCC1	92	35.714	Vulpes_vulpes
ENSPREG00000000713	r3hcc1	84	86.016	ENSXCOG00000017626	r3hcc1	86	86.016	Xiphophorus_couchianus
ENSPREG00000000713	r3hcc1	99	92.205	ENSXMAG00000018375	r3hcc1	99	92.205	Xiphophorus_maculatus