EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000742 (Gene tree)
Gene ID: 103476470
Gene Symbol: c1d
Alias: -
Full Name: C1D nuclear receptor corepressor
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 4408 bases
Position: chrLG15:2497848-2502255
Accession: 103476470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000000978	Sas10_Utp3	PF04000.15	4.5e-18	1	1
ENSPREP00000000988	Sas10_Utp3	PF04000.15	5.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001017	-	429	-	ENSPREP00000000978	142 (aa)	-	-
ENSPRET00000001027	-	3116	XM_008428857	ENSPREP00000000988	154 (aa)	XP_008427079	UPI0004A2382B

Gene Model

Click here to download ENSPREG00000000742's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000742	c1d	99	63.830	ENSG00000197223	C1D	100	63.830	Homo_sapiens
ENSPREG00000000742	c1d	100	80.000	ENSAPOG00000005466	c1d	100	80.000	Acanthochromis_polyacanthus
ENSPREG00000000742	c1d	98	65.468	ENSAMEG00000004859	C1D	95	65.468	Ailuropoda_melanoleuca
ENSPREG00000000742	c1d	93	83.333	ENSACIG00000012684	c1d	86	83.333	Amphilophus_citrinellus
ENSPREG00000000742	c1d	96	81.879	ENSAOCG00000020354	c1d	97	81.879	Amphiprion_ocellaris
ENSPREG00000000742	c1d	96	81.208	ENSAPEG00000001403	c1d	97	81.208	Amphiprion_percula
ENSPREG00000000742	c1d	99	79.221	ENSATEG00000012922	c1d	99	79.221	Anabas_testudineus
ENSPREG00000000742	c1d	83	68.644	ENSAPLG00000009320	C1D	90	64.394	Anas_platyrhynchos
ENSPREG00000000742	c1d	83	72.881	ENSACAG00000001337	C1D	97	72.881	Anolis_carolinensis
ENSPREG00000000742	c1d	99	63.121	ENSANAG00000035972	-	100	63.121	Aotus_nancymaae
ENSPREG00000000742	c1d	99	60.284	ENSANAG00000005773	-	100	60.284	Aotus_nancymaae
ENSPREG00000000742	c1d	94	76.552	ENSACLG00000026206	c1d	94	80.000	Astatotilapia_calliptera
ENSPREG00000000742	c1d	94	73.134	ENSAMXG00000043212	c1d	99	68.456	Astyanax_mexicanus
ENSPREG00000000742	c1d	98	64.748	ENSBTAG00000049002	C1D	99	64.748	Bos_taurus
ENSPREG00000000742	c1d	82	62.069	ENSCJAG00000044668	-	91	62.069	Callithrix_jacchus
ENSPREG00000000742	c1d	100	63.380	ENSCJAG00000006589	C1D	93	63.380	Callithrix_jacchus
ENSPREG00000000742	c1d	98	65.468	ENSCAFG00000030099	C1D	99	65.468	Canis_familiaris
ENSPREG00000000742	c1d	98	65.468	ENSCAFG00020026997	C1D	99	65.468	Canis_lupus_dingo
ENSPREG00000000742	c1d	98	64.748	ENSCHIG00000025729	C1D	99	64.748	Capra_hircus
ENSPREG00000000742	c1d	82	64.957	ENSTSYG00000026573	-	75	64.957	Carlito_syrichta
ENSPREG00000000742	c1d	98	64.748	ENSTSYG00000035739	-	99	64.748	Carlito_syrichta
ENSPREG00000000742	c1d	80	62.832	ENSCAPG00000011523	-	94	62.832	Cavia_aperea
ENSPREG00000000742	c1d	98	65.468	ENSCPOG00000037986	-	99	65.468	Cavia_porcellus
ENSPREG00000000742	c1d	80	63.717	ENSCPOG00000020112	-	94	63.717	Cavia_porcellus
ENSPREG00000000742	c1d	99	63.830	ENSCCAG00000030405	-	100	63.830	Cebus_capucinus
ENSPREG00000000742	c1d	99	63.121	ENSCATG00000043348	-	100	63.121	Cercocebus_atys
ENSPREG00000000742	c1d	99	63.121	ENSCATG00000045336	C1D	100	63.121	Cercocebus_atys
ENSPREG00000000742	c1d	98	65.468	ENSCLAG00000011883	C1D	99	65.468	Chinchilla_lanigera
ENSPREG00000000742	c1d	99	63.121	ENSCSAG00000014811	C1D	100	63.121	Chlorocebus_sabaeus
ENSPREG00000000742	c1d	98	65.468	ENSCHOG00000006719	C1D	78	65.468	Choloepus_hoffmanni
ENSPREG00000000742	c1d	87	66.667	ENSCPBG00000014451	C1D	83	66.667	Chrysemys_picta_bellii
ENSPREG00000000742	c1d	82	47.414	ENSCING00000020906	-	68	47.727	Ciona_intestinalis
ENSPREG00000000742	c1d	85	45.833	ENSCSAVG00000000150	-	69	45.833	Ciona_savignyi
ENSPREG00000000742	c1d	99	62.411	ENSCANG00000035564	C1D	100	62.411	Colobus_angolensis_palliatus
ENSPREG00000000742	c1d	75	67.290	ENSCANG00000036599	-	87	67.290	Colobus_angolensis_palliatus
ENSPREG00000000742	c1d	98	64.029	ENSCGRG00001023376	C1d	99	64.029	Cricetulus_griseus_chok1gshd
ENSPREG00000000742	c1d	98	64.029	ENSCGRG00000010245	C1d	99	64.029	Cricetulus_griseus_crigri
ENSPREG00000000742	c1d	100	77.622	ENSCSEG00000000587	c1d	97	79.710	Cynoglossus_semilaevis
ENSPREG00000000742	c1d	100	87.013	ENSCVAG00000004603	c1d	100	87.013	Cyprinodon_variegatus
ENSPREG00000000742	c1d	87	68.293	ENSDARG00000021112	c1d	93	65.217	Danio_rerio
ENSPREG00000000742	c1d	98	58.273	ENSDNOG00000046068	-	99	58.273	Dasypus_novemcinctus
ENSPREG00000000742	c1d	98	63.309	ENSDORG00000003300	C1d	99	63.309	Dipodomys_ordii
ENSPREG00000000742	c1d	65	68.817	ENSETEG00000014857	C1D	98	68.817	Echinops_telfairi
ENSPREG00000000742	c1d	89	49.606	ENSEBUG00000006874	c1d	80	49.606	Eptatretus_burgeri
ENSPREG00000000742	c1d	98	64.748	ENSEASG00005007307	C1D	90	64.748	Equus_asinus_asinus
ENSPREG00000000742	c1d	99	65.000	ENSECAG00000002187	C1D	100	65.000	Equus_caballus
ENSPREG00000000742	c1d	89	76.378	ENSELUG00000014823	c1d	87	76.378	Esox_lucius
ENSPREG00000000742	c1d	98	64.748	ENSFCAG00000028933	C1D	99	64.748	Felis_catus
ENSPREG00000000742	c1d	84	69.748	ENSFALG00000013640	C1D	72	69.748	Ficedula_albicollis
ENSPREG00000000742	c1d	98	52.143	ENSFDAG00000014175	-	98	52.143	Fukomys_damarensis
ENSPREG00000000742	c1d	98	64.748	ENSFDAG00000010462	-	99	64.748	Fukomys_damarensis
ENSPREG00000000742	c1d	100	86.364	ENSFHEG00000010545	c1d	100	86.364	Fundulus_heteroclitus
ENSPREG00000000742	c1d	87	73.171	ENSGMOG00000013911	-	98	73.171	Gadus_morhua
ENSPREG00000000742	c1d	89	68.254	ENSGALG00000008765	C1D	88	68.254	Gallus_gallus
ENSPREG00000000742	c1d	100	93.590	ENSGAFG00000012578	c1d	100	93.590	Gambusia_affinis
ENSPREG00000000742	c1d	90	78.125	ENSGACG00000011981	c1d	100	78.125	Gasterosteus_aculeatus
ENSPREG00000000742	c1d	87	65.854	ENSGAGG00000013383	C1D	83	65.854	Gopherus_agassizii
ENSPREG00000000742	c1d	94	63.158	ENSGGOG00000025808	-	76	63.158	Gorilla_gorilla
ENSPREG00000000742	c1d	99	61.702	ENSGGOG00000022296	-	100	61.702	Gorilla_gorilla
ENSPREG00000000742	c1d	98	64.029	ENSGGOG00000025982	-	76	65.441	Gorilla_gorilla
ENSPREG00000000742	c1d	95	76.712	ENSHBUG00000018531	c1d	85	80.137	Haplochromis_burtoni
ENSPREG00000000742	c1d	97	60.145	ENSHGLG00000021219	-	98	60.145	Heterocephalus_glaber_female
ENSPREG00000000742	c1d	91	67.442	ENSHGLG00000012332	-	98	64.493	Heterocephalus_glaber_female
ENSPREG00000000742	c1d	97	60.870	ENSHGLG00100019951	-	98	60.870	Heterocephalus_glaber_male
ENSPREG00000000742	c1d	98	63.309	ENSHGLG00100000221	-	99	63.309	Heterocephalus_glaber_male
ENSPREG00000000742	c1d	96	75.182	ENSHCOG00000014568	C1D	98	72.109	Hippocampus_comes
ENSPREG00000000742	c1d	96	75.182	ENSHCOG00000014589	c1d	98	72.109	Hippocampus_comes
ENSPREG00000000742	c1d	96	64.964	ENSIPUG00000018661	c1d	95	64.964	Ictalurus_punctatus
ENSPREG00000000742	c1d	98	64.029	ENSSTOG00000012346	C1D	99	64.029	Ictidomys_tridecemlineatus
ENSPREG00000000742	c1d	97	52.899	ENSJJAG00000016086	-	99	54.015	Jaculus_jaculus
ENSPREG00000000742	c1d	88	62.791	ENSJJAG00000023186	-	98	62.791	Jaculus_jaculus
ENSPREG00000000742	c1d	96	58.824	ENSJJAG00000005044	-	99	59.124	Jaculus_jaculus
ENSPREG00000000742	c1d	97	61.594	ENSJJAG00000009540	-	99	62.774	Jaculus_jaculus
ENSPREG00000000742	c1d	100	84.416	ENSKMAG00000015077	c1d	100	84.416	Kryptolebias_marmoratus
ENSPREG00000000742	c1d	100	78.710	ENSLBEG00000008351	c1d	100	78.710	Labrus_bergylta
ENSPREG00000000742	c1d	99	61.842	ENSLACG00000007516	C1D	83	71.545	Latimeria_chalumnae
ENSPREG00000000742	c1d	91	66.667	ENSLOCG00000016024	c1d	97	60.135	Lepisosteus_oculatus
ENSPREG00000000742	c1d	98	64.029	ENSLAFG00000002083	C1D	99	64.029	Loxodonta_africana
ENSPREG00000000742	c1d	99	61.702	ENSMFAG00000028681	-	100	61.702	Macaca_fascicularis
ENSPREG00000000742	c1d	99	63.121	ENSMFAG00000034261	C1D	100	63.121	Macaca_fascicularis
ENSPREG00000000742	c1d	99	63.121	ENSMFAG00000034034	-	100	63.121	Macaca_fascicularis
ENSPREG00000000742	c1d	99	61.702	ENSMMUG00000017209	-	100	61.702	Macaca_mulatta
ENSPREG00000000742	c1d	99	62.411	ENSMMUG00000043184	-	100	62.411	Macaca_mulatta
ENSPREG00000000742	c1d	97	63.768	ENSMMUG00000041557	C1D	99	63.768	Macaca_mulatta
ENSPREG00000000742	c1d	99	63.121	ENSMNEG00000040612	C1D	100	63.121	Macaca_nemestrina
ENSPREG00000000742	c1d	99	63.121	ENSMNEG00000020626	-	100	63.121	Macaca_nemestrina
ENSPREG00000000742	c1d	99	63.121	ENSMLEG00000028412	-	100	63.121	Mandrillus_leucophaeus
ENSPREG00000000742	c1d	99	63.121	ENSMLEG00000027619	C1D	100	63.121	Mandrillus_leucophaeus
ENSPREG00000000742	c1d	100	80.000	ENSMAMG00000022156	c1d	100	80.000	Mastacembelus_armatus
ENSPREG00000000742	c1d	95	76.712	ENSMZEG00005027343	c1d	97	80.137	Maylandia_zebra
ENSPREG00000000742	c1d	89	67.460	ENSMGAG00000004517	C1D	89	67.460	Meleagris_gallopavo
ENSPREG00000000742	c1d	98	64.748	ENSMAUG00000008974	C1d	99	64.748	Mesocricetus_auratus
ENSPREG00000000742	c1d	98	64.748	ENSMICG00000032141	C1D	99	64.748	Microcebus_murinus
ENSPREG00000000742	c1d	98	64.029	ENSMOCG00000010860	C1d	99	64.029	Microtus_ochrogaster
ENSPREG00000000742	c1d	97	79.137	ENSMMOG00000007332	c1d	100	75.484	Mola_mola
ENSPREG00000000742	c1d	96	61.765	ENSMODG00000003561	C1D	96	61.765	Monodelphis_domestica
ENSPREG00000000742	c1d	100	78.571	ENSMALG00000020864	c1d	95	84.800	Monopterus_albus
ENSPREG00000000742	c1d	98	64.748	MGP_CAROLIEiJ_G0016110	C1d	100	69.492	Mus_caroli
ENSPREG00000000742	c1d	98	64.748	ENSMUSG00000000581	C1d	100	69.492	Mus_musculus
ENSPREG00000000742	c1d	98	66.187	MGP_PahariEiJ_G0016781	C1d	100	70.339	Mus_pahari
ENSPREG00000000742	c1d	98	64.748	MGP_SPRETEiJ_G0016952	C1d	100	69.492	Mus_spretus
ENSPREG00000000742	c1d	98	65.468	ENSMPUG00000006224	C1D	99	65.468	Mustela_putorius_furo
ENSPREG00000000742	c1d	98	66.906	ENSMLUG00000010791	-	99	66.906	Myotis_lucifugus
ENSPREG00000000742	c1d	98	65.468	ENSMLUG00000024947	-	99	65.468	Myotis_lucifugus
ENSPREG00000000742	c1d	98	65.468	ENSMLUG00000029990	-	99	65.468	Myotis_lucifugus
ENSPREG00000000742	c1d	86	62.698	ENSNGAG00000012482	-	100	62.698	Nannospalax_galili
ENSPREG00000000742	c1d	97	62.319	ENSNGAG00000011872	-	98	62.319	Nannospalax_galili
ENSPREG00000000742	c1d	97	60.145	ENSNGAG00000016675	-	98	60.145	Nannospalax_galili
ENSPREG00000000742	c1d	99	73.203	ENSNBRG00000010704	c1d	97	79.452	Neolamprologus_brichardi
ENSPREG00000000742	c1d	99	63.830	ENSNLEG00000032919	-	78	63.830	Nomascus_leucogenys
ENSPREG00000000742	c1d	98	63.309	ENSOPRG00000009586	C1D	99	63.309	Ochotona_princeps
ENSPREG00000000742	c1d	87	60.484	ENSODEG00000018525	-	88	60.484	Octodon_degus
ENSPREG00000000742	c1d	97	64.493	ENSODEG00000011242	-	98	64.493	Octodon_degus
ENSPREG00000000742	c1d	97	64.493	ENSODEG00000018885	-	99	64.493	Octodon_degus
ENSPREG00000000742	c1d	99	79.085	ENSONIG00000001233	c1d	99	79.085	Oreochromis_niloticus
ENSPREG00000000742	c1d	67	78.947	ENSOANG00000008385	C1D	95	72.642	Ornithorhynchus_anatinus
ENSPREG00000000742	c1d	98	63.309	ENSOCUG00000009771	-	99	63.309	Oryctolagus_cuniculus
ENSPREG00000000742	c1d	98	63.309	ENSOCUG00000025587	-	99	63.309	Oryctolagus_cuniculus
ENSPREG00000000742	c1d	100	77.622	ENSORLG00000021968	c1d	99	75.974	Oryzias_latipes
ENSPREG00000000742	c1d	98	79.286	ENSORLG00020000507	c1d	98	77.483	Oryzias_latipes_hni
ENSPREG00000000742	c1d	97	79.137	ENSORLG00015004594	c1d	96	77.333	Oryzias_latipes_hsok
ENSPREG00000000742	c1d	99	75.974	ENSOMEG00000004672	c1d	99	75.974	Oryzias_melastigma
ENSPREG00000000742	c1d	98	63.309	ENSOGAG00000027934	-	99	63.309	Otolemur_garnettii
ENSPREG00000000742	c1d	98	64.748	ENSOARG00000019931	C1D	98	64.748	Ovis_aries
ENSPREG00000000742	c1d	94	63.158	ENSPPAG00000040091	-	76	63.158	Pan_paniscus
ENSPREG00000000742	c1d	99	63.830	ENSPPAG00000037847	-	100	63.830	Pan_paniscus
ENSPREG00000000742	c1d	98	64.748	ENSPPRG00000017045	-	99	64.748	Panthera_pardus
ENSPREG00000000742	c1d	97	41.304	ENSPPRG00000022830	-	97	41.304	Panthera_pardus
ENSPREG00000000742	c1d	98	64.748	ENSPTIG00000009414	C1D	99	64.748	Panthera_tigris_altaica
ENSPREG00000000742	c1d	99	63.830	ENSPTRG00000023558	C1D	100	63.830	Pan_troglodytes
ENSPREG00000000742	c1d	99	63.121	ENSPANG00000002886	C1D	78	63.121	Papio_anubis
ENSPREG00000000742	c1d	99	63.830	ENSPANG00000000501	-	100	63.830	Papio_anubis
ENSPREG00000000742	c1d	97	59.732	ENSPKIG00000004877	c1d	96	59.732	Paramormyrops_kingsleyae
ENSPREG00000000742	c1d	87	68.293	ENSPSIG00000010015	C1D	95	63.043	Pelodiscus_sinensis
ENSPREG00000000742	c1d	100	80.000	ENSPMGG00000009326	c1d	100	80.000	Periophthalmus_magnuspinnatus
ENSPREG00000000742	c1d	100	57.746	ENSPCIG00000006831	-	99	57.746	Phascolarctos_cinereus
ENSPREG00000000742	c1d	96	62.500	ENSPCIG00000018629	-	96	62.500	Phascolarctos_cinereus
ENSPREG00000000742	c1d	100	97.403	ENSPFOG00000003686	c1d	100	97.403	Poecilia_formosa
ENSPREG00000000742	c1d	100	97.403	ENSPLAG00000000228	c1d	100	97.403	Poecilia_latipinna
ENSPREG00000000742	c1d	100	97.403	ENSPMEG00000023213	c1d	100	97.403	Poecilia_mexicana
ENSPREG00000000742	c1d	99	60.993	ENSPPYG00000002294	-	100	60.993	Pongo_abelii
ENSPREG00000000742	c1d	99	63.830	ENSPPYG00000012354	C1D	77	63.830	Pongo_abelii
ENSPREG00000000742	c1d	98	52.518	ENSPCAG00000010088	C1D	78	52.518	Procavia_capensis
ENSPREG00000000742	c1d	98	64.748	ENSPCOG00000016112	C1D	99	64.748	Propithecus_coquereli
ENSPREG00000000742	c1d	98	64.748	ENSPVAG00000012692	C1D	78	64.748	Pteropus_vampyrus
ENSPREG00000000742	c1d	95	76.712	ENSPNYG00000008789	c1d	97	80.137	Pundamilia_nyererei
ENSPREG00000000742	c1d	95	68.889	ENSPNAG00000004219	c1d	99	65.101	Pygocentrus_nattereri
ENSPREG00000000742	c1d	98	64.748	ENSRNOG00000005982	C1d	99	64.748	Rattus_norvegicus
ENSPREG00000000742	c1d	99	62.411	ENSRBIG00000026211	-	100	62.411	Rhinopithecus_bieti
ENSPREG00000000742	c1d	99	63.121	ENSRROG00000029013	C1D	100	63.121	Rhinopithecus_roxellana
ENSPREG00000000742	c1d	99	63.121	ENSRROG00000005944	-	100	63.121	Rhinopithecus_roxellana
ENSPREG00000000742	c1d	99	63.830	ENSSBOG00000025275	C1D	100	63.830	Saimiri_boliviensis_boliviensis
ENSPREG00000000742	c1d	94	63.910	ENSSHAG00000008352	C1D	64	63.910	Sarcophilus_harrisii
ENSPREG00000000742	c1d	98	64.748	ENSSFOG00015010861	c1d	98	66.423	Scleropages_formosus
ENSPREG00000000742	c1d	100	78.065	ENSSMAG00000019230	c1d	100	78.065	Scophthalmus_maximus
ENSPREG00000000742	c1d	100	81.290	ENSSDUG00000020213	c1d	100	81.290	Seriola_dumerili
ENSPREG00000000742	c1d	100	80.645	ENSSLDG00000017371	c1d	100	80.645	Seriola_lalandi_dorsalis
ENSPREG00000000742	c1d	83	69.492	ENSSPUG00000006525	C1D	94	64.029	Sphenodon_punctatus
ENSPREG00000000742	c1d	99	81.046	ENSSPAG00000008574	c1d	99	81.699	Stegastes_partitus
ENSPREG00000000742	c1d	98	64.748	ENSSSCG00000039331	-	99	64.748	Sus_scrofa
ENSPREG00000000742	c1d	77	62.385	ENSSSCG00000035701	-	91	62.385	Sus_scrofa
ENSPREG00000000742	c1d	84	70.588	ENSTGUG00000002367	C1D	83	70.588	Taeniopygia_guttata
ENSPREG00000000742	c1d	98	72.143	ENSTRUG00000012245	c1d	90	70.667	Takifugu_rubripes
ENSPREG00000000742	c1d	98	76.429	ENSTNIG00000009827	c1d	99	74.830	Tetraodon_nigroviridis
ENSPREG00000000742	c1d	98	64.748	ENSTBEG00000009797	C1D	99	64.748	Tupaia_belangeri
ENSPREG00000000742	c1d	99	63.830	ENSTTRG00000013982	C1D	81	63.830	Tursiops_truncatus
ENSPREG00000000742	c1d	98	54.225	ENSUAMG00000025246	C1D	98	54.225	Ursus_americanus
ENSPREG00000000742	c1d	98	64.748	ENSUMAG00000021118	-	99	64.748	Ursus_maritimus
ENSPREG00000000742	c1d	72	55.238	ENSUMAG00000006451	-	91	56.140	Ursus_maritimus
ENSPREG00000000742	c1d	98	66.187	ENSVPAG00000012080	C1D	78	66.187	Vicugna_pacos
ENSPREG00000000742	c1d	98	65.468	ENSVVUG00000027629	C1D	87	65.468	Vulpes_vulpes
ENSPREG00000000742	c1d	92	66.412	ENSXETG00000025934	c1d	90	66.412	Xenopus_tropicalis
ENSPREG00000000742	c1d	100	96.104	ENSXCOG00000013813	c1d	100	96.104	Xiphophorus_couchianus
ENSPREG00000000742	c1d	100	95.455	ENSXMAG00000022273	c1d	100	95.455	Xiphophorus_maculatus