EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000000853 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 8193 bases
Position: chrLG17:16997671-17005863
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001119	zf-C2H2	PF00096.26	8.6e-24	1	5
ENSPREP00000001119	zf-C2H2	PF00096.26	8.6e-24	2	5
ENSPREP00000001119	zf-C2H2	PF00096.26	8.6e-24	3	5
ENSPREP00000001119	zf-C2H2	PF00096.26	8.6e-24	4	5
ENSPREP00000001119	zf-C2H2	PF00096.26	8.6e-24	5	5
ENSPREP00000001119	zf-met	PF12874.7	1.2e-05	1	2
ENSPREP00000001119	zf-met	PF12874.7	1.2e-05	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001159	-	954	-	ENSPREP00000001119	317 (aa)	-	-

Gene Model

Click here to download ENSPREG00000000853's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000853's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000000853	-	52	45.185	ENSPREG00000001823	-	81	45.185
ENSPREG00000000853	-	53	43.564	ENSPREG00000021924	-	77	43.564
ENSPREG00000000853	-	64	48.148	ENSPREG00000015254	-	72	48.148
ENSPREG00000000853	-	66	41.667	ENSPREG00000010261	zbtb17	62	41.667
ENSPREG00000000853	-	53	50.382	ENSPREG00000002181	-	94	50.382
ENSPREG00000000853	-	57	42.484	ENSPREG00000014373	-	80	42.484
ENSPREG00000000853	-	52	43.443	ENSPREG00000013689	-	96	43.704
ENSPREG00000000853	-	54	50.000	ENSPREG00000014127	-	83	45.926
ENSPREG00000000853	-	62	50.400	ENSPREG00000013476	-	98	48.175
ENSPREG00000000853	-	75	36.082	ENSPREG00000020897	zbtb47b	65	36.082
ENSPREG00000000853	-	60	48.624	ENSPREG00000019990	-	85	48.182
ENSPREG00000000853	-	51	51.852	ENSPREG00000004036	-	89	47.407
ENSPREG00000000853	-	56	49.624	ENSPREG00000006537	-	93	49.624
ENSPREG00000000853	-	51	40.000	ENSPREG00000002582	-	62	40.000
ENSPREG00000000853	-	53	40.397	ENSPREG00000013727	-	66	40.397
ENSPREG00000000853	-	50	47.445	ENSPREG00000004306	-	86	52.500
ENSPREG00000000853	-	62	38.158	ENSPREG00000007146	-	55	38.158
ENSPREG00000000853	-	53	45.185	ENSPREG00000009121	-	66	45.185
ENSPREG00000000853	-	55	46.923	ENSPREG00000002664	-	81	46.923
ENSPREG00000000853	-	55	49.630	ENSPREG00000005144	-	99	46.667
ENSPREG00000000853	-	66	46.429	ENSPREG00000015017	-	96	47.368
ENSPREG00000000853	-	63	41.060	ENSPREG00000016249	-	86	41.060
ENSPREG00000000853	-	52	46.667	ENSPREG00000004839	-	88	51.376
ENSPREG00000000853	-	56	46.853	ENSPREG00000001514	zgc:113343	54	46.853
ENSPREG00000000853	-	57	51.128	ENSPREG00000015286	-	92	51.128
ENSPREG00000000853	-	66	47.458	ENSPREG00000013154	-	83	47.458
ENSPREG00000000853	-	63	39.286	ENSPREG00000005538	-	73	39.286
ENSPREG00000000853	-	52	43.119	ENSPREG00000021718	gfi1b	56	42.342
ENSPREG00000000853	-	56	46.452	ENSPREG00000016204	-	70	42.000
ENSPREG00000000853	-	53	47.101	ENSPREG00000002715	-	80	47.458
ENSPREG00000000853	-	51	43.949	ENSPREG00000003193	-	99	43.949
ENSPREG00000000853	-	53	48.718	ENSPREG00000000364	-	68	48.718
ENSPREG00000000853	-	53	39.048	ENSPREG00000001101	znf319b	83	39.048
ENSPREG00000000853	-	62	36.538	ENSPREG00000008528	SNAI2	65	36.538
ENSPREG00000000853	-	61	54.074	ENSPREG00000019972	-	99	54.074
ENSPREG00000000853	-	66	45.926	ENSPREG00000000449	-	83	45.926
ENSPREG00000000853	-	64	38.519	ENSPREG00000016858	ZNF319	87	38.519
ENSPREG00000000853	-	85	48.148	ENSPREG00000010437	-	97	48.148
ENSPREG00000000853	-	66	46.715	ENSPREG00000014477	-	94	49.630
ENSPREG00000000853	-	71	51.181	ENSPREG00000001441	-	93	50.000
ENSPREG00000000853	-	57	48.889	ENSPREG00000021537	-	76	48.889
ENSPREG00000000853	-	74	43.609	ENSPREG00000021246	-	92	43.609
ENSPREG00000000853	-	55	40.789	ENSPREG00000018366	prdm5	73	40.789
ENSPREG00000000853	-	53	43.750	ENSPREG00000002642	-	93	43.750
ENSPREG00000000853	-	64	43.919	ENSPREG00000013719	-	74	44.954
ENSPREG00000000853	-	63	45.926	ENSPREG00000014348	-	59	45.926
ENSPREG00000000853	-	51	46.789	ENSPREG00000014340	-	71	46.789
ENSPREG00000000853	-	50	45.528	ENSPREG00000013699	-	54	45.528
ENSPREG00000000853	-	65	41.912	ENSPREG00000014898	-	65	41.912
ENSPREG00000000853	-	62	50.370	ENSPREG00000003894	-	88	50.370
ENSPREG00000000853	-	64	47.059	ENSPREG00000000733	-	90	47.059
ENSPREG00000000853	-	64	43.333	ENSPREG00000016220	-	78	43.333
ENSPREG00000000853	-	62	49.630	ENSPREG00000004672	-	88	49.630
ENSPREG00000000853	-	64	44.118	ENSPREG00000015226	-	95	44.118
ENSPREG00000000853	-	60	45.588	ENSPREG00000013965	-	96	45.588
ENSPREG00000000853	-	51	47.407	ENSPREG00000004745	-	72	47.407
ENSPREG00000000853	-	54	48.837	ENSPREG00000015081	-	86	48.837
ENSPREG00000000853	-	60	46.825	ENSPREG00000012132	-	100	47.059
ENSPREG00000000853	-	50	48.649	ENSPREG00000000153	-	84	48.649
ENSPREG00000000853	-	50	44.667	ENSPREG00000014330	-	56	44.667
ENSPREG00000000853	-	62	36.364	ENSPREG00000002548	-	98	36.364
ENSPREG00000000853	-	54	49.324	ENSPREG00000014945	-	98	49.324
ENSPREG00000000853	-	58	46.000	ENSPREG00000017631	znf668	75	46.000
ENSPREG00000000853	-	50	45.926	ENSPREG00000016270	-	75	44.186
ENSPREG00000000853	-	69	49.630	ENSPREG00000014028	-	100	49.474
ENSPREG00000000853	-	57	41.739	ENSPREG00000000451	-	73	41.739
ENSPREG00000000853	-	63	48.889	ENSPREG00000014366	-	99	48.889
ENSPREG00000000853	-	60	41.221	ENSPREG00000014097	gfi1ab	52	41.221
ENSPREG00000000853	-	53	45.714	ENSPREG00000016144	-	86	45.714
ENSPREG00000000853	-	50	51.190	ENSPREG00000003217	-	80	51.190
ENSPREG00000000853	-	60	45.638	ENSPREG00000011439	-	94	50.000
ENSPREG00000000853	-	73	51.282	ENSPREG00000008826	-	80	55.385
ENSPREG00000000853	-	71	34.008	ENSPREG00000019806	-	70	34.959
ENSPREG00000000853	-	62	44.828	ENSPREG00000003483	-	96	44.828
ENSPREG00000000853	-	56	43.066	ENSPREG00000001386	-	87	43.066
ENSPREG00000000853	-	67	44.203	ENSPREG00000013780	-	93	45.000
ENSPREG00000000853	-	53	53.211	ENSPREG00000011741	-	95	47.826
ENSPREG00000000853	-	74	40.667	ENSPREG00000007135	-	74	40.667
ENSPREG00000000853	-	52	41.481	ENSPREG00000003213	-	71	41.481
ENSPREG00000000853	-	67	42.045	ENSPREG00000017892	-	93	42.045
ENSPREG00000000853	-	55	46.715	ENSPREG00000004728	-	64	46.715
ENSPREG00000000853	-	52	52.252	ENSPREG00000004725	-	64	52.252
ENSPREG00000000853	-	75	46.358	ENSPREG00000003393	-	88	46.358
ENSPREG00000000853	-	65	47.619	ENSPREG00000005015	-	96	47.619
ENSPREG00000000853	-	58	49.580	ENSPREG00000014800	-	93	48.148
ENSPREG00000000853	-	62	47.273	ENSPREG00000020014	-	88	48.649
ENSPREG00000000853	-	55	44.545	ENSPREG00000015132	-	62	44.545
ENSPREG00000000853	-	53	47.407	ENSPREG00000009372	-	76	47.407
ENSPREG00000000853	-	64	46.667	ENSPREG00000003614	-	99	49.630
ENSPREG00000000853	-	53	45.528	ENSPREG00000002681	-	74	45.528
ENSPREG00000000853	-	50	43.089	ENSPREG00000009488	-	93	43.089
ENSPREG00000000853	-	57	50.000	ENSPREG00000003555	-	96	50.000
ENSPREG00000000853	-	57	46.528	ENSPREG00000014851	-	77	46.528
ENSPREG00000000853	-	52	43.902	ENSPREG00000014105	-	81	43.902
ENSPREG00000000853	-	65	45.736	ENSPREG00000015247	-	85	45.736
ENSPREG00000000853	-	55	43.243	ENSPREG00000019161	-	91	52.632
ENSPREG00000000853	-	80	45.000	ENSPREG00000004006	-	73	45.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000853	-	73	43.396	ENSAPOG00000021496	-	67	43.396	Acanthochromis_polyacanthus
ENSPREG00000000853	-	56	38.824	ENSAPOG00000000128	-	63	38.824	Acanthochromis_polyacanthus
ENSPREG00000000853	-	51	44.025	ENSAPEG00000010478	-	50	44.025	Amphiprion_percula
ENSPREG00000000853	-	59	35.602	ENSATEG00000015828	-	80	32.627	Anabas_testudineus
ENSPREG00000000853	-	56	43.382	ENSATEG00000024551	-	66	43.382	Anabas_testudineus
ENSPREG00000000853	-	80	47.436	ENSATEG00000011202	-	63	47.436	Anabas_testudineus
ENSPREG00000000853	-	54	43.810	ENSATEG00000022022	-	90	43.810	Anabas_testudineus
ENSPREG00000000853	-	63	45.192	ENSATEG00000011235	-	61	45.192	Anabas_testudineus
ENSPREG00000000853	-	51	43.624	ENSATEG00000024549	-	62	43.624	Anabas_testudineus
ENSPREG00000000853	-	51	41.429	ENSCVAG00000004508	-	50	41.429	Cyprinodon_variegatus
ENSPREG00000000853	-	51	43.548	ENSCVAG00000003630	-	55	43.548	Cyprinodon_variegatus
ENSPREG00000000853	-	58	48.624	ENSELUG00000008171	-	58	48.624	Esox_lucius
ENSPREG00000000853	-	54	45.455	ENSHBUG00000002878	-	57	45.455	Haplochromis_burtoni
ENSPREG00000000853	-	52	53.571	ENSHCOG00000008205	-	78	53.571	Hippocampus_comes
ENSPREG00000000853	-	61	41.964	ENSLBEG00000011006	-	52	41.964	Labrus_bergylta
ENSPREG00000000853	-	65	32.370	ENSLBEG00000014676	-	72	32.370	Labrus_bergylta
ENSPREG00000000853	-	57	43.511	ENSMAMG00000022152	-	50	43.511	Mastacembelus_armatus
ENSPREG00000000853	-	52	41.176	ENSMALG00000014761	-	66	41.176	Monopterus_albus
ENSPREG00000000853	-	52	43.478	ENSNBRG00000004381	-	82	40.909	Neolamprologus_brichardi
ENSPREG00000000853	-	55	47.414	ENSNBRG00000024051	-	56	47.414	Neolamprologus_brichardi
ENSPREG00000000853	-	51	42.963	ENSORLG00000025719	-	51	42.963	Oryzias_latipes
ENSPREG00000000853	-	59	30.151	ENSORLG00020005815	-	74	31.148	Oryzias_latipes_hni
ENSPREG00000000853	-	54	40.741	ENSORLG00020009554	-	78	40.741	Oryzias_latipes_hni
ENSPREG00000000853	-	51	42.963	ENSORLG00015012599	-	53	42.963	Oryzias_latipes_hsok
ENSPREG00000000853	-	65	45.455	ENSPLAG00000009651	-	71	45.455	Poecilia_latipinna
ENSPREG00000000853	-	56	49.242	ENSPNYG00000019187	-	76	46.809	Pundamilia_nyererei
ENSPREG00000000853	-	54	46.809	ENSPNYG00000023882	-	70	46.809	Pundamilia_nyererei
ENSPREG00000000853	-	51	49.375	ENSPNAG00000010317	-	82	53.333	Pygocentrus_nattereri
ENSPREG00000000853	-	51	44.025	ENSSPAG00000010524	-	51	44.025	Stegastes_partitus
ENSPREG00000000853	-	60	48.227	ENSSPAG00000021950	-	56	48.227	Stegastes_partitus