EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000000881 (Gene tree)
Gene ID: 103475888
Gene Symbol: msi2a
Alias: cb746|fi47b09|msi2|wu:fb02d08|wu:fi32d12|wu:fi47b09
Full Name: RNA-binding protein Musashi homolog 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 295684 bases
Position: chrLG14:11695265-11990948
Accession: 103475888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001190	RRM_1	PF00076.22	4.6e-33	1	2
ENSPREP00000001190	RRM_1	PF00076.22	4.6e-33	2	2
ENSPREP00000001231	RRM_1	PF00076.22	3.8e-29	1	2
ENSPREP00000001231	RRM_1	PF00076.22	3.8e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001230	-	1950	XM_008427839	ENSPREP00000001190	407 (aa)	XP_008426061	UPI0004A398D6
ENSPRET00000001271	-	951	-	ENSPREP00000001231	316 (aa)	-	-

Gene Model

Click here to download ENSPREG00000000881's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000881's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000000881	msi2a	56	37.778	ENSPREG00000005411	hnrnpa3	91	34.737
ENSPREG00000000881	msi2a	55	44.828	ENSPREG00000013528	-	72	48.205
ENSPREG00000000881	msi2a	78	64.356	ENSPREG00000014574	-	90	75.652
ENSPREG00000000881	msi2a	75	40.909	ENSPREG00000011049	dazap1	55	39.216
ENSPREG00000000881	msi2a	53	43.787	ENSPREG00000018081	hnrnpd	85	43.902
ENSPREG00000000881	msi2a	52	36.145	ENSPREG00000010603	-	73	35.683
ENSPREG00000000881	msi2a	55	44.828	ENSPREG00000004086	hnrnpaba	63	46.154
ENSPREG00000000881	msi2a	56	34.000	ENSPREG00000010619	HNRNPA0	73	34.416
ENSPREG00000000881	msi2a	96	71.761	ENSPREG00000021416	-	92	74.262

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000881	msi2a	99	85.671	ENSG00000153944	MSI2	97	93.227	Homo_sapiens
ENSPREG00000000881	msi2a	100	99.754	ENSAPOG00000001658	msi2a	100	100.000	Acanthochromis_polyacanthus
ENSPREG00000000881	msi2a	97	81.902	ENSAMEG00000002697	MSI2	99	82.866	Ailuropoda_melanoleuca
ENSPREG00000000881	msi2a	100	90.268	ENSACIG00000009475	msi2a	100	90.268	Amphilophus_citrinellus
ENSPREG00000000881	msi2a	55	91.111	ENSAOCG00000014822	msi2a	69	91.111	Amphiprion_ocellaris
ENSPREG00000000881	msi2a	99	97.444	ENSAPEG00000007706	msi2a	99	97.444	Amphiprion_percula
ENSPREG00000000881	msi2a	100	99.754	ENSATEG00000010498	msi2a	100	100.000	Anabas_testudineus
ENSPREG00000000881	msi2a	92	90.288	ENSATEG00000003301	-	97	95.025	Anabas_testudineus
ENSPREG00000000881	msi2a	88	93.478	ENSACAG00000005452	MSI2	88	75.603	Anolis_carolinensis
ENSPREG00000000881	msi2a	99	85.671	ENSANAG00000037827	MSI2	97	93.227	Aotus_nancymaae
ENSPREG00000000881	msi2a	100	99.263	ENSACLG00000007752	msi2a	100	99.588	Astatotilapia_calliptera
ENSPREG00000000881	msi2a	99	92.013	ENSAMXG00000010474	msi2b	99	92.013	Astyanax_mexicanus
ENSPREG00000000881	msi2a	100	89.189	ENSAMXG00000032796	msi2a	97	96.414	Astyanax_mexicanus
ENSPREG00000000881	msi2a	97	86.364	ENSBTAG00000004406	MSI2	94	94.348	Bos_taurus
ENSPREG00000000881	msi2a	63	60.563	WBGene00003423	msi-1	73	61.638	Caenorhabditis_elegans
ENSPREG00000000881	msi2a	99	85.671	ENSCJAG00000013998	MSI2	97	93.227	Callithrix_jacchus
ENSPREG00000000881	msi2a	92	85.113	ENSCAFG00020025620	MSI2	81	83.386	Canis_lupus_dingo
ENSPREG00000000881	msi2a	99	84.756	ENSCHIG00000016580	MSI2	97	91.633	Capra_hircus
ENSPREG00000000881	msi2a	92	85.461	ENSCPOG00000034042	MSI2	99	85.461	Cavia_porcellus
ENSPREG00000000881	msi2a	99	85.671	ENSCCAG00000033927	MSI2	97	93.227	Cebus_capucinus
ENSPREG00000000881	msi2a	96	86.120	ENSCATG00000040879	MSI2	97	92.829	Cercocebus_atys
ENSPREG00000000881	msi2a	99	81.214	ENSCLAG00000014325	MSI2	99	81.214	Chinchilla_lanigera
ENSPREG00000000881	msi2a	99	85.671	ENSCSAG00000005633	MSI2	97	93.227	Chlorocebus_sabaeus
ENSPREG00000000881	msi2a	88	65.233	ENSCHOG00000008660	MSI2	83	84.314	Choloepus_hoffmanni
ENSPREG00000000881	msi2a	92	94.581	ENSCPBG00000009942	MSI2	89	94.475	Chrysemys_picta_bellii
ENSPREG00000000881	msi2a	86	53.398	ENSCING00000018579	-	90	53.659	Ciona_intestinalis
ENSPREG00000000881	msi2a	60	64.851	ENSCSAVG00000010397	-	67	68.421	Ciona_savignyi
ENSPREG00000000881	msi2a	92	88.889	ENSCANG00000036414	MSI2	91	93.722	Colobus_angolensis_palliatus
ENSPREG00000000881	msi2a	99	85.106	ENSCGRG00001013330	Msi2	97	92.829	Cricetulus_griseus_chok1gshd
ENSPREG00000000881	msi2a	96	82.609	ENSCGRG00000003141	Msi2	97	82.609	Cricetulus_griseus_crigri
ENSPREG00000000881	msi2a	55	69.399	ENSCSEG00000013549	msi2a	100	77.596	Cynoglossus_semilaevis
ENSPREG00000000881	msi2a	81	77.320	ENSCSEG00000013557	msi2a	79	92.308	Cynoglossus_semilaevis
ENSPREG00000000881	msi2a	99	78.704	ENSCSEG00000003266	-	97	81.673	Cynoglossus_semilaevis
ENSPREG00000000881	msi2a	96	99.670	ENSCVAG00000017075	msi2a	100	99.670	Cyprinodon_variegatus
ENSPREG00000000881	msi2a	100	93.382	ENSDARG00000032614	msi2b	100	97.030	Danio_rerio
ENSPREG00000000881	msi2a	100	85.504	ENSDARG00000033901	msi2a	100	84.029	Danio_rerio
ENSPREG00000000881	msi2a	92	90.278	ENSDNOG00000014501	MSI2	97	93.839	Dasypus_novemcinctus
ENSPREG00000000881	msi2a	81	77.665	ENSDORG00000005394	Msi2	79	87.692	Dipodomys_ordii
ENSPREG00000000881	msi2a	52	88.182	ENSDORG00000028440	-	100	96.460	Dipodomys_ordii
ENSPREG00000000881	msi2a	90	53.312	FBgn0260943	Rbp6	88	65.278	Drosophila_melanogaster
ENSPREG00000000881	msi2a	69	72.368	ENSETEG00000012450	-	64	72.368	Echinops_telfairi
ENSPREG00000000881	msi2a	94	63.323	ENSEBUG00000006732	msi2a	75	79.524	Eptatretus_burgeri
ENSPREG00000000881	msi2a	89	92.500	ENSEASG00005002965	MSI2	94	76.590	Equus_asinus_asinus
ENSPREG00000000881	msi2a	92	88.261	ENSECAG00000011435	MSI2	99	79.096	Equus_caballus
ENSPREG00000000881	msi2a	85	77.075	ENSEEUG00000007810	MSI2	100	77.075	Erinaceus_europaeus
ENSPREG00000000881	msi2a	99	92.971	ENSELUG00000011747	msi2a	99	92.971	Esox_lucius
ENSPREG00000000881	msi2a	100	87.681	ENSELUG00000001361	msi2b	100	86.232	Esox_lucius
ENSPREG00000000881	msi2a	99	85.671	ENSFCAG00000041686	MSI2	97	93.227	Felis_catus
ENSPREG00000000881	msi2a	96	82.866	ENSFDAG00000016118	MSI2	99	82.866	Fukomys_damarensis
ENSPREG00000000881	msi2a	100	99.754	ENSFHEG00000000084	msi2a	100	99.754	Fundulus_heteroclitus
ENSPREG00000000881	msi2a	53	82.692	ENSGMOG00000007596	-	100	97.115	Gadus_morhua
ENSPREG00000000881	msi2a	99	80.347	ENSGALG00000005567	MSI2	99	80.347	Gallus_gallus
ENSPREG00000000881	msi2a	96	90.260	ENSGAFG00000006974	msi2a	100	90.260	Gambusia_affinis
ENSPREG00000000881	msi2a	99	87.547	ENSGAGG00000016542	MSI2	99	82.237	Gopherus_agassizii
ENSPREG00000000881	msi2a	92	88.889	ENSGGOG00000013182	MSI2	91	93.722	Gorilla_gorilla
ENSPREG00000000881	msi2a	100	99.263	ENSHBUG00000020800	msi2a	100	99.588	Haplochromis_burtoni
ENSPREG00000000881	msi2a	99	72.254	ENSHGLG00000012444	MSI2	99	72.254	Heterocephalus_glaber_female
ENSPREG00000000881	msi2a	52	88.288	ENSHGLG00100004028	-	87	96.491	Heterocephalus_glaber_male
ENSPREG00000000881	msi2a	78	80.193	ENSHGLG00100003744	MSI2	99	80.193	Heterocephalus_glaber_male
ENSPREG00000000881	msi2a	100	98.280	ENSHCOG00000000266	msi2a	100	98.280	Hippocampus_comes
ENSPREG00000000881	msi2a	96	82.422	ENSHCOG00000017241	-	98	71.571	Hippocampus_comes
ENSPREG00000000881	msi2a	100	88.206	ENSIPUG00000003732	msi2b	99	87.859	Ictalurus_punctatus
ENSPREG00000000881	msi2a	100	90.663	ENSIPUG00000021097	msi2a	100	95.062	Ictalurus_punctatus
ENSPREG00000000881	msi2a	92	85.461	ENSSTOG00000007884	MSI2	99	85.461	Ictidomys_tridecemlineatus
ENSPREG00000000881	msi2a	78	74.874	ENSJJAG00000006292	-	99	74.372	Jaculus_jaculus
ENSPREG00000000881	msi2a	52	88.182	ENSJJAG00000009467	-	100	96.460	Jaculus_jaculus
ENSPREG00000000881	msi2a	100	94.595	ENSKMAG00000009494	msi2a	100	94.595	Kryptolebias_marmoratus
ENSPREG00000000881	msi2a	100	99.754	ENSLBEG00000007061	msi2a	100	99.754	Labrus_bergylta
ENSPREG00000000881	msi2a	95	74.309	ENSLBEG00000026223	-	100	72.928	Labrus_bergylta
ENSPREG00000000881	msi2a	100	89.926	ENSLOCG00000004675	msi2b	100	88.452	Lepisosteus_oculatus
ENSPREG00000000881	msi2a	92	88.889	ENSMFAG00000003775	MSI2	91	93.722	Macaca_fascicularis
ENSPREG00000000881	msi2a	92	88.889	ENSMMUG00000002069	MSI2	91	93.722	Macaca_mulatta
ENSPREG00000000881	msi2a	99	85.671	ENSMNEG00000045275	MSI2	97	93.227	Macaca_nemestrina
ENSPREG00000000881	msi2a	92	88.889	ENSMLEG00000033888	MSI2	91	93.722	Mandrillus_leucophaeus
ENSPREG00000000881	msi2a	96	92.079	ENSMAMG00000002488	-	99	94.040	Mastacembelus_armatus
ENSPREG00000000881	msi2a	100	99.510	ENSMAMG00000010503	msi2a	100	100.000	Mastacembelus_armatus
ENSPREG00000000881	msi2a	100	99.263	ENSMZEG00005007676	msi2a	100	99.263	Maylandia_zebra
ENSPREG00000000881	msi2a	99	80.692	ENSMAUG00000003862	Msi2	99	80.692	Mesocricetus_auratus
ENSPREG00000000881	msi2a	99	85.671	ENSMICG00000013598	-	97	93.227	Microcebus_murinus
ENSPREG00000000881	msi2a	99	66.667	ENSMICG00000032913	-	96	78.261	Microcebus_murinus
ENSPREG00000000881	msi2a	99	80.925	ENSMOCG00000005820	Msi2	99	80.925	Microtus_ochrogaster
ENSPREG00000000881	msi2a	93	88.435	ENSMMOG00000008348	msi2a	90	100.000	Mola_mola
ENSPREG00000000881	msi2a	78	79.710	ENSMODG00000014790	MSI2	99	79.710	Monodelphis_domestica
ENSPREG00000000881	msi2a	100	99.346	ENSMALG00000000071	msi2a	100	100.000	Monopterus_albus
ENSPREG00000000881	msi2a	99	85.366	MGP_CAROLIEiJ_G0016948	Msi2	100	96.460	Mus_caroli
ENSPREG00000000881	msi2a	99	85.366	ENSMUSG00000069769	Msi2	100	96.460	Mus_musculus
ENSPREG00000000881	msi2a	99	85.366	MGP_PahariEiJ_G0018079	Msi2	100	96.460	Mus_pahari
ENSPREG00000000881	msi2a	99	85.366	MGP_SPRETEiJ_G0017795	Msi2	100	96.460	Mus_spretus
ENSPREG00000000881	msi2a	97	86.688	ENSMPUG00000015377	MSI2	94	94.348	Mustela_putorius_furo
ENSPREG00000000881	msi2a	97	86.688	ENSMLUG00000007865	MSI2	94	93.913	Myotis_lucifugus
ENSPREG00000000881	msi2a	99	80.925	ENSNGAG00000017807	Msi2	99	80.925	Nannospalax_galili
ENSPREG00000000881	msi2a	99	96.805	ENSNBRG00000014596	msi2a	99	96.805	Neolamprologus_brichardi
ENSPREG00000000881	msi2a	92	88.889	ENSNLEG00000008059	MSI2	95	93.301	Nomascus_leucogenys
ENSPREG00000000881	msi2a	68	83.553	ENSOPRG00000000872	-	64	83.553	Ochotona_princeps
ENSPREG00000000881	msi2a	99	81.214	ENSODEG00000011974	MSI2	99	81.214	Octodon_degus
ENSPREG00000000881	msi2a	55	90.066	ENSONIG00000001972	msi2a	84	100.000	Oreochromis_niloticus
ENSPREG00000000881	msi2a	90	91.324	ENSOANG00000005667	MSI2	99	78.723	Ornithorhynchus_anatinus
ENSPREG00000000881	msi2a	97	86.688	ENSOCUG00000010440	MSI2	94	94.348	Oryctolagus_cuniculus
ENSPREG00000000881	msi2a	100	94.840	ENSORLG00000009671	msi2a	95	100.000	Oryzias_latipes
ENSPREG00000000881	msi2a	100	99.509	ENSORLG00020021556	msi2a	100	100.000	Oryzias_latipes_hni
ENSPREG00000000881	msi2a	100	94.840	ENSORLG00015004592	msi2a	95	100.000	Oryzias_latipes_hsok
ENSPREG00000000881	msi2a	100	94.840	ENSOMEG00000000146	msi2a	100	100.000	Oryzias_melastigma
ENSPREG00000000881	msi2a	97	83.117	ENSOGAG00000005621	MSI2	97	89.565	Otolemur_garnettii
ENSPREG00000000881	msi2a	96	82.866	ENSPPAG00000037697	MSI2	91	93.722	Pan_paniscus
ENSPREG00000000881	msi2a	96	87.789	ENSPPRG00000001848	MSI2	91	94.348	Panthera_pardus
ENSPREG00000000881	msi2a	70	74.459	ENSPTIG00000021873	-	90	75.527	Panthera_tigris_altaica
ENSPREG00000000881	msi2a	92	85.161	ENSPTIG00000021678	MSI2	95	85.161	Panthera_tigris_altaica
ENSPREG00000000881	msi2a	92	88.889	ENSPTRG00000009437	MSI2	91	93.722	Pan_troglodytes
ENSPREG00000000881	msi2a	99	85.671	ENSPANG00000022319	MSI2	97	93.227	Papio_anubis
ENSPREG00000000881	msi2a	95	85.032	ENSPKIG00000007038	-	96	93.004	Paramormyrops_kingsleyae
ENSPREG00000000881	msi2a	99	89.394	ENSPSIG00000008618	MSI2	100	80.941	Pelodiscus_sinensis
ENSPREG00000000881	msi2a	99	96.805	ENSPMGG00000005888	msi2a	99	96.805	Periophthalmus_magnuspinnatus
ENSPREG00000000881	msi2a	52	88.182	ENSPEMG00000021793	-	100	96.460	Peromyscus_maniculatus_bairdii
ENSPREG00000000881	msi2a	99	79.661	ENSPCIG00000006063	MSI2	99	79.661	Phascolarctos_cinereus
ENSPREG00000000881	msi2a	54	84.762	ENSPFOG00000019337	MSI2	92	99.048	Poecilia_formosa
ENSPREG00000000881	msi2a	55	88.971	ENSPLAG00000000436	msi2a	72	100.000	Poecilia_latipinna
ENSPREG00000000881	msi2a	55	100.000	ENSPMEG00000013247	msi2a	75	100.000	Poecilia_mexicana
ENSPREG00000000881	msi2a	92	86.555	ENSPPYG00000008244	-	99	86.555	Pongo_abelii
ENSPREG00000000881	msi2a	63	87.692	ENSPCAG00000010552	MSI2	95	87.692	Procavia_capensis
ENSPREG00000000881	msi2a	52	88.889	ENSPCOG00000019195	-	93	95.420	Propithecus_coquereli
ENSPREG00000000881	msi2a	92	82.534	ENSPVAG00000017053	MSI2	99	82.534	Pteropus_vampyrus
ENSPREG00000000881	msi2a	100	99.263	ENSPNYG00000018393	msi2a	100	99.588	Pundamilia_nyererei
ENSPREG00000000881	msi2a	99	92.038	ENSPNAG00000014957	msi2a	97	96.016	Pygocentrus_nattereri
ENSPREG00000000881	msi2a	99	91.720	ENSPNAG00000000844	msi2b	99	91.720	Pygocentrus_nattereri
ENSPREG00000000881	msi2a	92	89.928	ENSRNOG00000025338	Msi2	97	93.532	Rattus_norvegicus
ENSPREG00000000881	msi2a	52	88.182	ENSRROG00000034421	-	92	96.491	Rhinopithecus_roxellana
ENSPREG00000000881	msi2a	92	89.286	ENSSBOG00000026425	MSI2	91	93.722	Saimiri_boliviensis_boliviensis
ENSPREG00000000881	msi2a	96	82.866	ENSSHAG00000008672	MSI2	99	82.866	Sarcophilus_harrisii
ENSPREG00000000881	msi2a	96	84.818	ENSSFOG00015021687	-	97	93.243	Scleropages_formosus
ENSPREG00000000881	msi2a	100	69.321	ENSSFOG00015012168	msi2b	100	68.998	Scleropages_formosus
ENSPREG00000000881	msi2a	100	99.509	ENSSMAG00000018484	msi2a	100	100.000	Scophthalmus_maximus
ENSPREG00000000881	msi2a	99	82.090	ENSSDUG00000021968	-	99	94.040	Seriola_dumerili
ENSPREG00000000881	msi2a	100	99.754	ENSSDUG00000014507	msi2a	100	100.000	Seriola_dumerili
ENSPREG00000000881	msi2a	100	99.754	ENSSLDG00000017172	msi2a	100	99.754	Seriola_lalandi_dorsalis
ENSPREG00000000881	msi2a	55	82.911	ENSSPUG00000000913	-	94	92.405	Sphenodon_punctatus
ENSPREG00000000881	msi2a	100	99.754	ENSSPAG00000017793	msi2a	100	99.754	Stegastes_partitus
ENSPREG00000000881	msi2a	99	85.671	ENSSSCG00000038505	MSI2	97	93.227	Sus_scrofa
ENSPREG00000000881	msi2a	78	80.193	ENSTGUG00000008452	MSI2	99	80.193	Taeniopygia_guttata
ENSPREG00000000881	msi2a	97	98.223	ENSTRUG00000021248	msi2a	95	98.223	Takifugu_rubripes
ENSPREG00000000881	msi2a	72	73.950	ENSTBEG00000001241	MSI2	73	77.686	Tupaia_belangeri
ENSPREG00000000881	msi2a	92	81.092	ENSTTRG00000002189	MSI2	91	94.737	Tursiops_truncatus
ENSPREG00000000881	msi2a	97	86.688	ENSUAMG00000000700	MSI2	96	94.595	Ursus_americanus
ENSPREG00000000881	msi2a	88	84.848	ENSUMAG00000000505	MSI2	95	93.782	Ursus_maritimus
ENSPREG00000000881	msi2a	57	81.768	ENSVPAG00000006837	-	62	81.868	Vicugna_pacos
ENSPREG00000000881	msi2a	92	90.378	ENSVVUG00000011783	MSI2	98	92.411	Vulpes_vulpes
ENSPREG00000000881	msi2a	100	93.857	ENSXCOG00000006113	msi2a	100	93.857	Xiphophorus_couchianus
ENSPREG00000000881	msi2a	100	99.754	ENSXMAG00000000608	msi2a	100	99.754	Xiphophorus_maculatus