EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000900 (Gene tree)
Gene ID: 103467774
Gene Symbol: pan2
Alias: -
Full Name: poly(A) specific ribonuclease subunit PAN2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 17297 bases
Position: chrLG7:16674273-16691569
Accession: 103467774
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001233	RNase_T	PF00929.24	4.2e-20	1	1
ENSPREP00000001209	RNase_T	PF00929.24	4.2e-20	1	1
ENSPREP00000001181	RNase_T	PF00929.24	4.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001249	-	3654	XM_008414442	ENSPREP00000001209	1211 (aa)	XP_008412664	UPI0004A34223
ENSPRET00000001221	-	3639	XM_017306013	ENSPREP00000001181	1206 (aa)	XP_017161502	UPI0004A4B149
ENSPRET00000001274	-	3546	-	ENSPREP00000001233	1181 (aa)	-	-

Gene Model

Click here to download ENSPREG00000000900's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000900's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000900	pan2	100	94.030	ENSAPOG00000022955	pan2	100	94.030	Acanthochromis_polyacanthus
ENSPREG00000000900	pan2	100	75.911	ENSAMEG00000003824	PAN2	100	75.911	Ailuropoda_melanoleuca
ENSPREG00000000900	pan2	99	71.709	ENSACIG00000012858	PAN2	99	71.538	Amphilophus_citrinellus
ENSPREG00000000900	pan2	99	90.301	ENSACIG00000013079	pan2	99	90.301	Amphilophus_citrinellus
ENSPREG00000000900	pan2	100	94.444	ENSAOCG00000022334	pan2	100	94.444	Amphiprion_ocellaris
ENSPREG00000000900	pan2	100	93.884	ENSAPEG00000022760	pan2	100	93.884	Amphiprion_percula
ENSPREG00000000900	pan2	99	94.983	ENSATEG00000024030	pan2	100	94.983	Anabas_testudineus
ENSPREG00000000900	pan2	94	77.748	ENSAPLG00000005195	PAN2	100	77.748	Anas_platyrhynchos
ENSPREG00000000900	pan2	100	76.846	ENSACAG00000007067	PAN2	100	76.846	Anolis_carolinensis
ENSPREG00000000900	pan2	100	75.662	ENSANAG00000036468	PAN2	99	80.851	Aotus_nancymaae
ENSPREG00000000900	pan2	99	70.755	ENSACLG00000023821	pan2	99	71.318	Astatotilapia_calliptera
ENSPREG00000000900	pan2	100	93.223	ENSACLG00000023674	pan2	100	93.388	Astatotilapia_calliptera
ENSPREG00000000900	pan2	99	87.300	ENSAMXG00000005418	pan2	98	87.300	Astyanax_mexicanus
ENSPREG00000000900	pan2	100	75.745	ENSBTAG00000004376	PAN2	100	75.745	Bos_taurus
ENSPREG00000000900	pan2	100	75.662	ENSCJAG00000011141	PAN2	100	75.662	Callithrix_jacchus
ENSPREG00000000900	pan2	100	75.745	ENSCAFG00000000119	PAN2	100	79.487	Canis_familiaris
ENSPREG00000000900	pan2	100	74.795	ENSCAFG00020024865	PAN2	100	74.632	Canis_lupus_dingo
ENSPREG00000000900	pan2	100	75.062	ENSCHIG00000026935	PAN2	100	74.897	Capra_hircus
ENSPREG00000000900	pan2	100	74.856	ENSTSYG00000006927	PAN2	99	80.851	Carlito_syrichta
ENSPREG00000000900	pan2	100	75.473	ENSCPOG00000014918	PAN2	100	75.309	Cavia_porcellus
ENSPREG00000000900	pan2	100	75.662	ENSCCAG00000036637	PAN2	99	80.851	Cebus_capucinus
ENSPREG00000000900	pan2	100	75.579	ENSCATG00000045076	PAN2	99	81.551	Cercocebus_atys
ENSPREG00000000900	pan2	100	75.473	ENSCLAG00000011700	PAN2	100	75.309	Chinchilla_lanigera
ENSPREG00000000900	pan2	100	75.414	ENSCSAG00000005173	PAN2	100	75.414	Chlorocebus_sabaeus
ENSPREG00000000900	pan2	100	76.846	ENSCPBG00000014029	PAN2	100	76.879	Chrysemys_picta_bellii
ENSPREG00000000900	pan2	91	47.012	ENSCSAVG00000003833	-	98	60.933	Ciona_savignyi
ENSPREG00000000900	pan2	100	73.863	ENSCANG00000017798	PAN2	100	73.863	Colobus_angolensis_palliatus
ENSPREG00000000900	pan2	100	76.139	ENSCGRG00001019707	Pan2	100	76.139	Cricetulus_griseus_chok1gshd
ENSPREG00000000900	pan2	100	75.411	ENSCGRG00000009996	Pan2	100	75.247	Cricetulus_griseus_crigri
ENSPREG00000000900	pan2	100	88.723	ENSCSEG00000021529	pan2	100	88.723	Cynoglossus_semilaevis
ENSPREG00000000900	pan2	100	96.517	ENSCVAG00000010197	pan2	100	96.517	Cyprinodon_variegatus
ENSPREG00000000900	pan2	100	86.081	ENSDARG00000074675	pan2	100	86.081	Danio_rerio
ENSPREG00000000900	pan2	100	75.871	ENSDNOG00000010940	PAN2	100	75.871	Dasypus_novemcinctus
ENSPREG00000000900	pan2	97	41.214	FBgn0033352	PAN2	98	40.764	Drosophila_melanogaster
ENSPREG00000000900	pan2	76	85.260	ENSETEG00000012041	PAN2	81	85.260	Echinops_telfairi
ENSPREG00000000900	pan2	98	57.456	ENSEBUG00000002773	pan2	99	57.287	Eptatretus_burgeri
ENSPREG00000000900	pan2	100	76.594	ENSEASG00005005235	PAN2	100	76.594	Equus_asinus_asinus
ENSPREG00000000900	pan2	100	75.993	ENSECAG00000019814	PAN2	100	75.993	Equus_caballus
ENSPREG00000000900	pan2	99	88.583	ENSELUG00000024604	pan2	99	88.667	Esox_lucius
ENSPREG00000000900	pan2	100	75.828	ENSFCAG00000012021	PAN2	100	75.828	Felis_catus
ENSPREG00000000900	pan2	99	77.143	ENSFALG00000000464	PAN2	98	76.975	Ficedula_albicollis
ENSPREG00000000900	pan2	100	75.349	ENSFDAG00000017104	PAN2	100	75.225	Fukomys_damarensis
ENSPREG00000000900	pan2	91	95.395	ENSFHEG00000000157	pan2	98	95.395	Fundulus_heteroclitus
ENSPREG00000000900	pan2	100	86.315	ENSGMOG00000007249	pan2	99	86.689	Gadus_morhua
ENSPREG00000000900	pan2	100	77.427	ENSGALG00000031512	PAN2	100	77.427	Gallus_gallus
ENSPREG00000000900	pan2	100	98.590	ENSGAFG00000000284	pan2	100	98.590	Gambusia_affinis
ENSPREG00000000900	pan2	100	90.782	ENSGACG00000010722	pan2	99	91.611	Gasterosteus_aculeatus
ENSPREG00000000900	pan2	100	76.266	ENSGAGG00000007868	PAN2	100	76.116	Gopherus_agassizii
ENSPREG00000000900	pan2	100	75.497	ENSGGOG00000009115	PAN2	99	81.551	Gorilla_gorilla
ENSPREG00000000900	pan2	100	93.532	ENSHBUG00000005234	pan2	100	93.698	Haplochromis_burtoni
ENSPREG00000000900	pan2	99	75.354	ENSHGLG00000005647	PAN2	98	75.187	Heterocephalus_glaber_female
ENSPREG00000000900	pan2	99	75.104	ENSHGLG00100014057	PAN2	98	74.938	Heterocephalus_glaber_male
ENSPREG00000000900	pan2	100	90.000	ENSHCOG00000007920	pan2	100	90.000	Hippocampus_comes
ENSPREG00000000900	pan2	100	86.033	ENSIPUG00000011065	PAN2	100	86.033	Ictalurus_punctatus
ENSPREG00000000900	pan2	94	75.410	ENSSTOG00000015974	PAN2	100	75.410	Ictidomys_tridecemlineatus
ENSPREG00000000900	pan2	100	75.602	ENSJJAG00000013044	Pan2	98	75.602	Jaculus_jaculus
ENSPREG00000000900	pan2	100	94.610	ENSKMAG00000006192	pan2	100	94.610	Kryptolebias_marmoratus
ENSPREG00000000900	pan2	99	88.557	ENSLBEG00000015763	pan2	99	88.557	Labrus_bergylta
ENSPREG00000000900	pan2	100	69.667	ENSLACG00000018694	PAN2	100	69.429	Latimeria_chalumnae
ENSPREG00000000900	pan2	100	85.679	ENSLOCG00000004333	pan2	99	85.797	Lepisosteus_oculatus
ENSPREG00000000900	pan2	100	73.476	ENSLAFG00000014873	PAN2	100	73.311	Loxodonta_africana
ENSPREG00000000900	pan2	100	75.414	ENSMFAG00000002293	PAN2	99	81.551	Macaca_fascicularis
ENSPREG00000000900	pan2	100	75.414	ENSMMUG00000013482	PAN2	100	78.535	Macaca_mulatta
ENSPREG00000000900	pan2	100	75.497	ENSMNEG00000033264	PAN2	99	81.283	Macaca_nemestrina
ENSPREG00000000900	pan2	100	75.579	ENSMLEG00000037388	PAN2	99	81.551	Mandrillus_leucophaeus
ENSPREG00000000900	pan2	99	93.640	ENSMAMG00000001624	pan2	100	93.610	Mastacembelus_armatus
ENSPREG00000000900	pan2	98	72.265	ENSMZEG00005026472	pan2	99	72.265	Maylandia_zebra
ENSPREG00000000900	pan2	100	93.223	ENSMZEG00005026462	pan2	100	93.388	Maylandia_zebra
ENSPREG00000000900	pan2	97	78.190	ENSMGAG00000001439	PAN2	99	78.190	Meleagris_gallopavo
ENSPREG00000000900	pan2	99	76.063	ENSMAUG00000012602	Pan2	99	75.897	Mesocricetus_auratus
ENSPREG00000000900	pan2	100	75.662	ENSMICG00000017661	PAN2	99	79.570	Microcebus_murinus
ENSPREG00000000900	pan2	100	75.539	ENSMOCG00000007191	Pan2	100	75.539	Microtus_ochrogaster
ENSPREG00000000900	pan2	99	92.475	ENSMMOG00000009313	pan2	98	92.167	Mola_mola
ENSPREG00000000900	pan2	99	93.322	ENSMALG00000013377	pan2	100	93.135	Monopterus_albus
ENSPREG00000000900	pan2	100	75.041	MGP_CAROLIEiJ_G0015930	Pan2	100	74.876	Mus_caroli
ENSPREG00000000900	pan2	100	75.768	ENSMUSG00000005682	Pan2	100	75.602	Mus_musculus
ENSPREG00000000900	pan2	100	75.206	MGP_PahariEiJ_G0031154	Pan2	100	75.041	Mus_pahari
ENSPREG00000000900	pan2	100	75.934	MGP_SPRETEiJ_G0016755	Pan2	100	75.934	Mus_spretus
ENSPREG00000000900	pan2	100	75.993	ENSMPUG00000001383	PAN2	100	75.993	Mustela_putorius_furo
ENSPREG00000000900	pan2	100	75.497	ENSMLUG00000006737	PAN2	100	75.497	Myotis_lucifugus
ENSPREG00000000900	pan2	100	75.808	ENSNGAG00000007930	Pan2	100	75.808	Nannospalax_galili
ENSPREG00000000900	pan2	92	96.744	ENSNBRG00000006585	pan2	99	96.744	Neolamprologus_brichardi
ENSPREG00000000900	pan2	100	71.488	ENSNLEG00000017499	PAN2	99	81.016	Nomascus_leucogenys
ENSPREG00000000900	pan2	100	76.885	ENSMEUG00000010125	PAN2	100	76.885	Notamacropus_eugenii
ENSPREG00000000900	pan2	100	75.227	ENSOPRG00000001468	PAN2	100	75.267	Ochotona_princeps
ENSPREG00000000900	pan2	100	75.123	ENSODEG00000007203	PAN2	100	74.959	Octodon_degus
ENSPREG00000000900	pan2	100	91.977	ENSONIG00000016732	pan2	100	91.977	Oreochromis_niloticus
ENSPREG00000000900	pan2	82	66.961	ENSOANG00000005151	PAN2	99	67.059	Ornithorhynchus_anatinus
ENSPREG00000000900	pan2	100	75.329	ENSOCUG00000007227	PAN2	100	75.164	Oryctolagus_cuniculus
ENSPREG00000000900	pan2	99	92.308	ENSORLG00000015195	pan2	100	92.289	Oryzias_latipes
ENSPREG00000000900	pan2	99	92.391	ENSORLG00020000277	pan2	100	92.371	Oryzias_latipes_hni
ENSPREG00000000900	pan2	99	92.224	ENSORLG00015005193	pan2	100	92.123	Oryzias_latipes_hsok
ENSPREG00000000900	pan2	99	92.391	ENSOMEG00000022087	pan2	100	92.371	Oryzias_melastigma
ENSPREG00000000900	pan2	100	74.631	ENSOGAG00000030620	PAN2	100	74.466	Otolemur_garnettii
ENSPREG00000000900	pan2	100	75.579	ENSOARG00000009379	PAN2	100	75.579	Ovis_aries
ENSPREG00000000900	pan2	100	75.497	ENSPPAG00000001208	PAN2	99	81.551	Pan_paniscus
ENSPREG00000000900	pan2	100	75.745	ENSPPRG00000021586	PAN2	100	75.745	Panthera_pardus
ENSPREG00000000900	pan2	100	71.993	ENSPTIG00000012494	PAN2	100	71.993	Panthera_tigris_altaica
ENSPREG00000000900	pan2	100	75.497	ENSPTRG00000052054	PAN2	99	81.551	Pan_troglodytes
ENSPREG00000000900	pan2	92	76.577	ENSPANG00000018906	PAN2	99	81.551	Papio_anubis
ENSPREG00000000900	pan2	100	85.702	ENSPKIG00000003973	pan2	100	85.702	Paramormyrops_kingsleyae
ENSPREG00000000900	pan2	100	73.571	ENSPSIG00000003267	PAN2	100	73.866	Pelodiscus_sinensis
ENSPREG00000000900	pan2	100	91.547	ENSPMGG00000023186	pan2	100	91.547	Periophthalmus_magnuspinnatus
ENSPREG00000000900	pan2	100	74.979	ENSPEMG00000018505	Pan2	100	74.815	Peromyscus_maniculatus_bairdii
ENSPREG00000000900	pan2	91	67.240	ENSPMAG00000004731	pan2	100	67.059	Petromyzon_marinus
ENSPREG00000000900	pan2	100	77.261	ENSPCIG00000024643	PAN2	100	77.095	Phascolarctos_cinereus
ENSPREG00000000900	pan2	100	99.005	ENSPFOG00000008392	pan2	100	99.005	Poecilia_formosa
ENSPREG00000000900	pan2	100	98.922	ENSPLAG00000009198	pan2	100	98.922	Poecilia_latipinna
ENSPREG00000000900	pan2	100	98.922	ENSPMEG00000001484	pan2	100	98.922	Poecilia_mexicana
ENSPREG00000000900	pan2	90	77.557	ENSPPYG00000004656	PAN2	99	77.984	Pongo_abelii
ENSPREG00000000900	pan2	92	76.603	ENSPCAG00000011047	PAN2	99	76.603	Procavia_capensis
ENSPREG00000000900	pan2	100	75.745	ENSPCOG00000018263	PAN2	100	75.745	Propithecus_coquereli
ENSPREG00000000900	pan2	94	73.225	ENSPVAG00000007591	PAN2	94	73.225	Pteropus_vampyrus
ENSPREG00000000900	pan2	99	93.567	ENSPNYG00000002629	pan2	99	93.734	Pundamilia_nyererei
ENSPREG00000000900	pan2	100	87.934	ENSPNAG00000027140	pan2	100	87.934	Pygocentrus_nattereri
ENSPREG00000000900	pan2	100	75.934	ENSRNOG00000032441	Pan2	100	75.768	Rattus_norvegicus
ENSPREG00000000900	pan2	100	75.331	ENSRBIG00000029591	PAN2	99	81.016	Rhinopithecus_bieti
ENSPREG00000000900	pan2	100	75.248	ENSRROG00000041950	PAN2	99	81.016	Rhinopithecus_roxellana
ENSPREG00000000900	pan2	100	75.579	ENSSBOG00000027343	PAN2	99	80.851	Saimiri_boliviensis_boliviensis
ENSPREG00000000900	pan2	92	76.744	ENSSHAG00000000122	PAN2	99	78.376	Sarcophilus_harrisii
ENSPREG00000000900	pan2	100	86.446	ENSSFOG00015017740	pan2	100	86.446	Scleropages_formosus
ENSPREG00000000900	pan2	100	92.244	ENSSMAG00000020901	pan2	100	92.492	Scophthalmus_maximus
ENSPREG00000000900	pan2	100	94.711	ENSSDUG00000001840	pan2	100	94.711	Seriola_dumerili
ENSPREG00000000900	pan2	100	95.025	ENSSLDG00000013866	pan2	100	95.025	Seriola_lalandi_dorsalis
ENSPREG00000000900	pan2	92	75.700	ENSSARG00000013350	PAN2	92	75.700	Sorex_araneus
ENSPREG00000000900	pan2	92	78.791	ENSSPUG00000004270	PAN2	99	78.610	Sphenodon_punctatus
ENSPREG00000000900	pan2	100	93.967	ENSSPAG00000019970	pan2	100	93.967	Stegastes_partitus
ENSPREG00000000900	pan2	100	75.331	ENSSSCG00000000393	PAN2	100	75.331	Sus_scrofa
ENSPREG00000000900	pan2	100	91.983	ENSTRUG00000014260	pan2	100	91.983	Takifugu_rubripes
ENSPREG00000000900	pan2	100	91.570	ENSTNIG00000012537	pan2	99	91.827	Tetraodon_nigroviridis
ENSPREG00000000900	pan2	80	75.267	ENSTTRG00000007150	PAN2	80	75.267	Tursiops_truncatus
ENSPREG00000000900	pan2	100	76.466	ENSUAMG00000026522	PAN2	100	76.466	Ursus_americanus
ENSPREG00000000900	pan2	100	75.267	ENSUMAG00000017020	PAN2	100	75.267	Ursus_maritimus
ENSPREG00000000900	pan2	79	90.640	ENSVPAG00000007309	PAN2	85	90.640	Vicugna_pacos
ENSPREG00000000900	pan2	100	75.745	ENSVVUG00000021878	PAN2	100	75.745	Vulpes_vulpes
ENSPREG00000000900	pan2	99	74.108	ENSXETG00000009434	pan2	100	74.937	Xenopus_tropicalis
ENSPREG00000000900	pan2	100	94.266	ENSXCOG00000014391	pan2	100	94.266	Xiphophorus_couchianus
ENSPREG00000000900	pan2	100	99.088	ENSXMAG00000011661	pan2	100	99.088	Xiphophorus_maculatus