EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000000912 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP ribosylation factor 4
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 3974 bases
Position: chrLG5:3235212-3239185
Accession: 103464348
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001194	MMR_HSR1	PF01926.23	9.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001234	-	940	XM_008408385	ENSPREP00000001194	171 (aa)	XP_008406607	-

Gene Model

Click here to download ENSPREG00000000912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000912's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000000912	-	100	68.023	ENSPREG00000008632	arf2b	95	68.023
ENSPREG00000000912	-	89	47.403	ENSPREG00000002806	arl5a	59	47.403
ENSPREG00000000912	-	52	35.955	ENSPREG00000002020	-	66	35.955
ENSPREG00000000912	-	65	33.607	ENSPREG00000004889	-	56	33.607
ENSPREG00000000912	-	95	47.337	ENSPREG00000015645	arl4cb	87	47.337
ENSPREG00000000912	-	87	32.026	ENSPREG00000004191	arl8ba	82	32.026
ENSPREG00000000912	-	86	30.968	ENSPREG00000005312	sar1b	71	30.968
ENSPREG00000000912	-	92	46.012	ENSPREG00000001976	arl14	81	46.012
ENSPREG00000000912	-	65	33.607	ENSPREG00000020321	rab1ab	57	33.607
ENSPREG00000000912	-	82	34.507	ENSPREG00000021315	arl8bb	76	34.507
ENSPREG00000000912	-	100	68.023	ENSPREG00000020988	-	95	68.023
ENSPREG00000000912	-	91	49.686	ENSPREG00000001895	-	77	49.686
ENSPREG00000000912	-	100	45.930	ENSPREG00000008262	arl8	96	45.930
ENSPREG00000000912	-	91	44.231	ENSPREG00000020490	arl2	85	44.231
ENSPREG00000000912	-	65	34.426	ENSPREG00000003616	rab1ba	58	34.426
ENSPREG00000000912	-	93	42.073	ENSPREG00000013042	-	83	42.073
ENSPREG00000000912	-	86	32.903	ENSPREG00000016098	sar1ab	78	32.903
ENSPREG00000000912	-	100	68.023	ENSPREG00000012688	arf3b	95	68.023
ENSPREG00000000912	-	89	46.250	ENSPREG00000011615	arl4d	80	46.250
ENSPREG00000000912	-	89	50.932	ENSPREG00000021699	-	83	50.932
ENSPREG00000000912	-	82	33.099	ENSPREG00000004992	arl8a	76	33.099
ENSPREG00000000912	-	81	30.201	ENSPREG00000017517	zgc:171927	66	30.201
ENSPREG00000000912	-	91	46.541	ENSPREG00000003821	arl3	70	46.541
ENSPREG00000000912	-	99	50.877	ENSPREG00000013361	arl1	91	50.877
ENSPREG00000000912	-	100	35.135	ENSPREG00000019667	arfrp1	91	35.135
ENSPREG00000000912	-	86	42.953	ENSPREG00000010815	arl11	94	42.953
ENSPREG00000000912	-	92	41.975	ENSPREG00000021943	ARL6	88	41.975
ENSPREG00000000912	-	100	43.605	ENSPREG00000008730	arl5c	96	43.605
ENSPREG00000000912	-	92	46.541	ENSPREG00000003600	arl3l2	85	46.541
ENSPREG00000000912	-	100	66.860	ENSPREG00000007723	-	96	66.860
ENSPREG00000000912	-	94	45.455	ENSPREG00000014738	-	89	45.455
ENSPREG00000000912	-	100	67.816	ENSPREG00000009009	-	95	67.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000912	-	100	87.719	ENSAPEG00000002838	-	96	87.719	Amphiprion_percula
ENSPREG00000000912	-	95	79.012	ENSATEG00000003808	-	92	79.012	Anabas_testudineus
ENSPREG00000000912	-	100	87.135	ENSATEG00000003847	-	96	87.135	Anabas_testudineus
ENSPREG00000000912	-	99	84.706	ENSACLG00000009822	-	91	84.706	Astatotilapia_calliptera
ENSPREG00000000912	-	86	76.871	ENSCVAG00000013902	-	90	76.871	Cyprinodon_variegatus
ENSPREG00000000912	-	87	90.604	ENSFHEG00000019659	-	84	90.604	Fundulus_heteroclitus
ENSPREG00000000912	-	65	99.099	ENSGAFG00000002801	-	98	99.099	Gambusia_affinis
ENSPREG00000000912	-	100	89.595	ENSGACG00000003831	-	96	89.595	Gasterosteus_aculeatus
ENSPREG00000000912	-	100	83.041	ENSHBUG00000001250	-	96	83.041	Haplochromis_burtoni
ENSPREG00000000912	-	100	86.550	ENSLBEG00000027205	-	97	86.550	Labrus_bergylta
ENSPREG00000000912	-	100	84.795	ENSMAMG00000013955	-	96	84.795	Mastacembelus_armatus
ENSPREG00000000912	-	100	84.795	ENSMZEG00005016274	-	96	84.795	Maylandia_zebra
ENSPREG00000000912	-	100	84.795	ENSMZEG00005016277	-	96	84.795	Maylandia_zebra
ENSPREG00000000912	-	100	81.871	ENSMMOG00000013651	-	94	81.871	Mola_mola
ENSPREG00000000912	-	100	83.041	ENSONIG00000004340	-	96	83.041	Oreochromis_niloticus
ENSPREG00000000912	-	100	100.000	ENSPLAG00000015887	-	96	100.000	Poecilia_latipinna
ENSPREG00000000912	-	100	100.000	ENSPMEG00000007064	-	96	100.000	Poecilia_mexicana
ENSPREG00000000912	-	100	74.752	ENSSMAG00000002487	-	96	74.752	Scophthalmus_maximus
ENSPREG00000000912	-	100	86.550	ENSSDUG00000020599	-	96	86.550	Seriola_dumerili
ENSPREG00000000912	-	100	87.719	ENSSLDG00000020097	-	96	87.719	Seriola_lalandi_dorsalis
ENSPREG00000000912	-	100	85.965	ENSSPAG00000017484	-	96	85.965	Stegastes_partitus
ENSPREG00000000912	-	93	77.987	ENSTRUG00000025171	-	98	77.987	Takifugu_rubripes
ENSPREG00000000912	-	65	82.143	ENSTNIG00000005043	-	99	82.143	Tetraodon_nigroviridis
ENSPREG00000000912	-	86	78.378	ENSTNIG00000018302	-	76	71.676	Tetraodon_nigroviridis
ENSPREG00000000912	-	86	80.952	ENSTNIG00000001632	-	75	73.837	Tetraodon_nigroviridis
ENSPREG00000000912	-	91	78.065	ENSTNIG00000000796	-	75	73.837	Tetraodon_nigroviridis
ENSPREG00000000912	-	100	97.661	ENSXMAG00000029601	-	96	97.661	Xiphophorus_maculatus