EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000000963 (Gene tree)
Gene ID: 103463156
Gene Symbol: -
Alias: -
Full Name: polypyrimidine tract-binding protein 1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 1599 bases
Position: chrLG4:4054964-4056562
Accession: 103463156
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001283	RRM_5	PF13893.6	1.2e-17	1	2
ENSPREP00000001283	RRM_5	PF13893.6	1.2e-17	2	2
ENSPREP00000001283	RRM_1	PF00076.22	2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001323	-	426	XM_008406360	ENSPREP00000001283	141 (aa)	XP_008404582	UPI0004A32A7B

Gene Model

Click here to download ENSPREG00000000963's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000963's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000963	-	100	82.270	ENSG00000011304	PTBP1	88	87.324	Homo_sapiens
ENSPREG00000000963	-	100	71.631	ENSACLG00000001885	ptbp2b	77	71.631	Astatotilapia_calliptera
ENSPREG00000000963	-	100	82.270	ENSCJAG00000020162	-	68	82.270	Callithrix_jacchus
ENSPREG00000000963	-	100	82.270	ENSCCAG00000025811	-	72	82.270	Cebus_capucinus
ENSPREG00000000963	-	100	82.270	ENSCATG00000033337	-	72	82.270	Cercocebus_atys
ENSPREG00000000963	-	100	59.574	ENSCING00000002002	-	70	59.574	Ciona_intestinalis
ENSPREG00000000963	-	100	82.270	ENSCANG00000038259	PTBP1	73	82.270	Colobus_angolensis_palliatus
ENSPREG00000000963	-	100	70.922	ENSCANG00000040666	-	69	70.922	Colobus_angolensis_palliatus
ENSPREG00000000963	-	100	77.305	ENSCANG00000005173	-	72	77.305	Colobus_angolensis_palliatus
ENSPREG00000000963	-	100	79.433	ENSCGRG00000006229	-	72	79.433	Cricetulus_griseus_crigri
ENSPREG00000000963	-	100	82.394	ENSCVAG00000021593	-	76	82.394	Cyprinodon_variegatus
ENSPREG00000000963	-	100	87.234	ENSDARG00000031907	ptbp1b	63	87.234	Danio_rerio
ENSPREG00000000963	-	100	71.631	ENSDARG00000101947	ptbp2a	77	71.631	Danio_rerio
ENSPREG00000000963	-	100	82.979	ENSEASG00005021535	-	93	82.979	Equus_asinus_asinus
ENSPREG00000000963	-	100	84.397	ENSFCAG00000001219	PTBP1	72	84.397	Felis_catus
ENSPREG00000000963	-	88	30.534	ENSGAGG00000008379	-	74	30.534	Gopherus_agassizii
ENSPREG00000000963	-	91	69.531	ENSGGOG00000026783	-	66	68.103	Gorilla_gorilla
ENSPREG00000000963	-	100	82.270	ENSGGOG00000005090	-	75	82.270	Gorilla_gorilla
ENSPREG00000000963	-	100	94.326	ENSHBUG00000000040	-	93	94.326	Haplochromis_burtoni
ENSPREG00000000963	-	100	82.270	ENSHGLG00100004890	-	100	82.270	Heterocephalus_glaber_male
ENSPREG00000000963	-	100	70.922	ENSHCOG00000013349	ptbp2a	59	70.922	Hippocampus_comes
ENSPREG00000000963	-	100	71.631	ENSHCOG00000015622	-	65	71.631	Hippocampus_comes
ENSPREG00000000963	-	100	82.270	ENSMFAG00000038325	-	72	82.270	Macaca_fascicularis
ENSPREG00000000963	-	100	82.270	ENSMMUG00000016450	-	72	82.270	Macaca_mulatta
ENSPREG00000000963	-	100	82.270	ENSMNEG00000028851	PTBP1	72	82.270	Macaca_nemestrina
ENSPREG00000000963	-	100	82.270	ENSMLEG00000013865	PTBP1	73	82.270	Mandrillus_leucophaeus
ENSPREG00000000963	-	100	81.560	ENSMICG00000007131	PTBP1	72	81.560	Microcebus_murinus
ENSPREG00000000963	-	100	72.028	ENSMALG00000013144	ptbp3	75	72.028	Monopterus_albus
ENSPREG00000000963	-	100	71.631	ENSNBRG00000001492	-	63	71.631	Neolamprologus_brichardi
ENSPREG00000000963	-	100	82.270	ENSNLEG00000000864	PTBP1	73	82.270	Nomascus_leucogenys
ENSPREG00000000963	-	100	80.851	ENSOANG00000008979	-	75	80.851	Ornithorhynchus_anatinus
ENSPREG00000000963	-	100	70.213	ENSOMEG00000009759	ptbp2a	85	70.213	Oryzias_melastigma
ENSPREG00000000963	-	100	82.270	ENSPPAG00000032109	-	75	82.270	Pan_paniscus
ENSPREG00000000963	-	87	74.590	ENSPPAG00000011962	-	68	75.207	Pan_paniscus
ENSPREG00000000963	-	100	84.397	ENSPPRG00000006787	PTBP1	72	84.397	Panthera_pardus
ENSPREG00000000963	-	100	82.270	ENSPTRG00000010165	PTBP1	75	82.270	Pan_troglodytes
ENSPREG00000000963	-	100	82.270	ENSPANG00000007281	PTBP1	72	82.270	Papio_anubis
ENSPREG00000000963	-	100	90.780	ENSPMGG00000020540	-	76	87.234	Periophthalmus_magnuspinnatus
ENSPREG00000000963	-	100	62.411	ENSPMAG00000007617	-	87	62.411	Petromyzon_marinus
ENSPREG00000000963	-	100	81.560	ENSPCOG00000015093	PTBP1	72	81.560	Propithecus_coquereli
ENSPREG00000000963	-	100	80.986	ENSPNYG00000005126	-	76	80.986	Pundamilia_nyererei
ENSPREG00000000963	-	100	71.631	ENSRBIG00000007193	-	70	71.631	Rhinopithecus_bieti
ENSPREG00000000963	-	100	60.284	ENSRBIG00000026293	-	72	60.284	Rhinopithecus_bieti
ENSPREG00000000963	-	100	82.270	ENSRBIG00000044228	PTBP1	72	82.270	Rhinopithecus_bieti
ENSPREG00000000963	-	100	82.270	ENSRROG00000016534	PTBP1	72	82.270	Rhinopithecus_roxellana
ENSPREG00000000963	-	100	58.865	ENSRROG00000021572	-	66	58.865	Rhinopithecus_roxellana
ENSPREG00000000963	-	100	63.121	ENSRROG00000044920	-	72	63.121	Rhinopithecus_roxellana
ENSPREG00000000963	-	100	82.270	ENSSBOG00000034376	-	73	82.270	Saimiri_boliviensis_boliviensis
ENSPREG00000000963	-	70	88.776	ENSSLDG00000009104	-	76	88.776	Seriola_lalandi_dorsalis
ENSPREG00000000963	-	100	64.336	ENSSPAG00000008968	-	84	64.336	Stegastes_partitus
ENSPREG00000000963	-	100	73.050	ENSTRUG00000000761	ptbp2a	93	73.050	Takifugu_rubripes
ENSPREG00000000963	-	100	73.759	ENSUAMG00000011687	-	100	73.759	Ursus_americanus
ENSPREG00000000963	-	100	84.397	ENSUMAG00000005396	-	97	84.397	Ursus_maritimus
ENSPREG00000000963	-	98	31.973	ENSXETG00000033350	HNRNPLL	56	31.973	Xenopus_tropicalis
ENSPREG00000000963	-	100	73.050	ENSXCOG00000007998	ptbp2b	71	66.197	Xiphophorus_couchianus