EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000000978 (Gene tree)
Gene ID: 103470358
Gene Symbol: rbm19
Alias: nil per os|npo
Full Name: RNA binding motif protein 19
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 12107 bases
Position: chrLG9:22943526-22955632
Accession: 103470358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001420	RRM_1	PF00076.22	1.3e-89	1	6
ENSPREP00000001420	RRM_1	PF00076.22	1.3e-89	2	6
ENSPREP00000001420	RRM_1	PF00076.22	1.3e-89	3	6
ENSPREP00000001420	RRM_1	PF00076.22	1.3e-89	4	6
ENSPREP00000001420	RRM_1	PF00076.22	1.3e-89	5	6
ENSPREP00000001420	RRM_1	PF00076.22	1.3e-89	6	6
ENSPREP00000001439	RRM_1	PF00076.22	1.3e-89	1	6
ENSPREP00000001439	RRM_1	PF00076.22	1.3e-89	2	6
ENSPREP00000001439	RRM_1	PF00076.22	1.3e-89	3	6
ENSPREP00000001439	RRM_1	PF00076.22	1.3e-89	4	6
ENSPREP00000001439	RRM_1	PF00076.22	1.3e-89	5	6
ENSPREP00000001439	RRM_1	PF00076.22	1.3e-89	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001462	-	6495	XM_008418746	ENSPREP00000001420	912 (aa)	XP_008416968	UPI0004A4D407
ENSPRET00000001480	-	2766	-	ENSPREP00000001439	921 (aa)	-	-

Gene Model

Click here to download ENSPREG00000000978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000000978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000000978	rbm19	75	37.333	ENSPREG00000015886	pabpc1l	87	37.333
ENSPREG00000000978	rbm19	71	38.667	ENSPREG00000019595	pabpc1a	91	38.667
ENSPREG00000000978	rbm19	73	32.000	ENSPREG00000001589	pabpc4	65	32.000
ENSPREG00000000978	rbm19	58	37.333	ENSPREG00000010911	pabpc1b	59	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000000978	rbm19	99	58.854	ENSG00000122965	RBM19	99	58.506	Homo_sapiens
ENSPREG00000000978	rbm19	100	81.798	ENSAPOG00000010507	rbm19	100	81.857	Acanthochromis_polyacanthus
ENSPREG00000000978	rbm19	99	56.818	ENSAMEG00000008544	RBM19	99	56.979	Ailuropoda_melanoleuca
ENSPREG00000000978	rbm19	97	80.333	ENSACIG00000017780	rbm19	99	80.355	Amphilophus_citrinellus
ENSPREG00000000978	rbm19	100	82.143	ENSAOCG00000008554	rbm19	100	82.613	Amphiprion_ocellaris
ENSPREG00000000978	rbm19	98	79.691	ENSAPEG00000022381	rbm19	97	81.980	Amphiprion_percula
ENSPREG00000000978	rbm19	99	80.761	ENSATEG00000007000	rbm19	99	79.847	Anabas_testudineus
ENSPREG00000000978	rbm19	94	56.781	ENSAPLG00000015319	RBM19	99	55.786	Anas_platyrhynchos
ENSPREG00000000978	rbm19	99	57.708	ENSACAG00000005065	RBM19	99	58.012	Anolis_carolinensis
ENSPREG00000000978	rbm19	99	58.628	ENSANAG00000024136	RBM19	99	58.599	Aotus_nancymaae
ENSPREG00000000978	rbm19	100	73.419	ENSACLG00000001399	rbm19	100	72.843	Astatotilapia_calliptera
ENSPREG00000000978	rbm19	89	71.980	ENSAMXG00000017073	rbm19	99	61.816	Astyanax_mexicanus
ENSPREG00000000978	rbm19	99	58.682	ENSBTAG00000031824	RBM19	99	59.329	Bos_taurus
ENSPREG00000000978	rbm19	77	50.526	WBGene00004315	rbd-1	80	50.962	Caenorhabditis_elegans
ENSPREG00000000978	rbm19	99	58.411	ENSCJAG00000009798	RBM19	99	58.793	Callithrix_jacchus
ENSPREG00000000978	rbm19	99	57.708	ENSCAFG00000009146	RBM19	98	57.812	Canis_familiaris
ENSPREG00000000978	rbm19	99	57.604	ENSCAFG00020017862	RBM19	98	57.917	Canis_lupus_dingo
ENSPREG00000000978	rbm19	99	58.065	ENSCHIG00000014917	RBM19	99	59.139	Capra_hircus
ENSPREG00000000978	rbm19	93	57.834	ENSTSYG00000007207	RBM19	96	57.852	Carlito_syrichta
ENSPREG00000000978	rbm19	98	58.980	ENSCAPG00000006869	RBM19	98	59.318	Cavia_aperea
ENSPREG00000000978	rbm19	99	59.894	ENSCPOG00000026629	RBM19	99	60.403	Cavia_porcellus
ENSPREG00000000978	rbm19	95	51.640	ENSCCAG00000026637	-	82	52.199	Cebus_capucinus
ENSPREG00000000978	rbm19	99	57.856	ENSCCAG00000021665	-	99	58.836	Cebus_capucinus
ENSPREG00000000978	rbm19	98	58.228	ENSCATG00000035841	RBM19	99	57.806	Cercocebus_atys
ENSPREG00000000978	rbm19	99	58.927	ENSCLAG00000009965	RBM19	99	58.368	Chinchilla_lanigera
ENSPREG00000000978	rbm19	99	69.643	ENSCSAG00000002352	RBM19	95	69.643	Chlorocebus_sabaeus
ENSPREG00000000978	rbm19	99	59.404	ENSCPBG00000011990	RBM19	99	59.836	Chrysemys_picta_bellii
ENSPREG00000000978	rbm19	79	55.537	ENSCING00000023076	-	96	54.397	Ciona_intestinalis
ENSPREG00000000978	rbm19	99	58.958	ENSCANG00000035927	RBM19	99	58.299	Colobus_angolensis_palliatus
ENSPREG00000000978	rbm19	99	58.333	ENSCGRG00001000323	Rbm19	99	58.031	Cricetulus_griseus_chok1gshd
ENSPREG00000000978	rbm19	99	58.333	ENSCGRG00000010371	Rbm19	99	58.031	Cricetulus_griseus_crigri
ENSPREG00000000978	rbm19	100	75.160	ENSCSEG00000017436	rbm19	100	75.586	Cynoglossus_semilaevis
ENSPREG00000000978	rbm19	100	86.528	ENSCVAG00000000300	rbm19	100	86.528	Cyprinodon_variegatus
ENSPREG00000000978	rbm19	99	65.401	ENSDARG00000042590	rbm19	99	65.111	Danio_rerio
ENSPREG00000000978	rbm19	99	57.188	ENSDNOG00000024534	RBM19	95	57.604	Dasypus_novemcinctus
ENSPREG00000000978	rbm19	97	58.110	ENSDORG00000008549	Rbm19	100	57.895	Dipodomys_ordii
ENSPREG00000000978	rbm19	97	38.561	FBgn0036018	CG3335	96	37.112	Drosophila_melanogaster
ENSPREG00000000978	rbm19	57	78.261	ENSETEG00000016887	-	58	77.941	Echinops_telfairi
ENSPREG00000000978	rbm19	80	44.793	ENSEBUG00000008521	-	99	42.891	Eptatretus_burgeri
ENSPREG00000000978	rbm19	99	58.903	ENSEASG00005009452	RBM19	99	58.420	Equus_asinus_asinus
ENSPREG00000000978	rbm19	99	58.428	ENSECAG00000023716	RBM19	99	58.506	Equus_caballus
ENSPREG00000000978	rbm19	100	71.674	ENSELUG00000012561	rbm19	99	70.999	Esox_lucius
ENSPREG00000000978	rbm19	99	56.933	ENSFCAG00000002962	RBM19	98	57.398	Felis_catus
ENSPREG00000000978	rbm19	98	59.448	ENSFALG00000007768	RBM19	99	58.707	Ficedula_albicollis
ENSPREG00000000978	rbm19	99	58.108	ENSFDAG00000004629	RBM19	99	58.135	Fukomys_damarensis
ENSPREG00000000978	rbm19	100	85.683	ENSFHEG00000012578	rbm19	100	85.574	Fundulus_heteroclitus
ENSPREG00000000978	rbm19	97	70.056	ENSGMOG00000013120	rbm19	100	70.168	Gadus_morhua
ENSPREG00000000978	rbm19	98	58.542	ENSGALG00000008289	RBM19	99	58.642	Gallus_gallus
ENSPREG00000000978	rbm19	100	91.803	ENSGAFG00000012337	rbm19	100	91.585	Gambusia_affinis
ENSPREG00000000978	rbm19	99	77.959	ENSGACG00000009462	rbm19	100	77.972	Gasterosteus_aculeatus
ENSPREG00000000978	rbm19	62	66.325	ENSGAGG00000019457	RBM19	99	65.983	Gopherus_agassizii
ENSPREG00000000978	rbm19	99	59.067	ENSGGOG00000007371	RBM19	99	58.585	Gorilla_gorilla
ENSPREG00000000978	rbm19	100	77.115	ENSHBUG00000009047	rbm19	100	76.681	Haplochromis_burtoni
ENSPREG00000000978	rbm19	99	57.544	ENSHGLG00000010899	RBM19	99	57.632	Heterocephalus_glaber_female
ENSPREG00000000978	rbm19	99	56.952	ENSHGLG00100017936	RBM19	99	57.143	Heterocephalus_glaber_male
ENSPREG00000000978	rbm19	100	74.298	ENSHCOG00000016446	rbm19	100	74.190	Hippocampus_comes
ENSPREG00000000978	rbm19	99	65.859	ENSIPUG00000023849	rbm19	100	65.195	Ictalurus_punctatus
ENSPREG00000000978	rbm19	100	82.740	ENSKMAG00000014807	rbm19	100	83.315	Kryptolebias_marmoratus
ENSPREG00000000978	rbm19	100	79.396	ENSLBEG00000012897	rbm19	100	79.203	Labrus_bergylta
ENSPREG00000000978	rbm19	68	62.270	ENSLACG00000012030	RBM19	100	58.879	Latimeria_chalumnae
ENSPREG00000000978	rbm19	99	66.134	ENSLOCG00000008341	rbm19	99	66.273	Lepisosteus_oculatus
ENSPREG00000000978	rbm19	93	56.089	ENSLAFG00000004187	RBM19	100	56.943	Loxodonta_africana
ENSPREG00000000978	rbm19	99	59.167	ENSMFAG00000046091	RBM19	99	57.400	Macaca_fascicularis
ENSPREG00000000978	rbm19	99	59.271	ENSMMUG00000010496	RBM19	99	58.438	Macaca_mulatta
ENSPREG00000000978	rbm19	99	54.953	ENSMNEG00000028452	RBM19	99	56.169	Macaca_nemestrina
ENSPREG00000000978	rbm19	99	57.513	ENSMLEG00000034550	RBM19	98	57.840	Mandrillus_leucophaeus
ENSPREG00000000978	rbm19	100	81.838	ENSMAMG00000014397	rbm19	100	81.602	Mastacembelus_armatus
ENSPREG00000000978	rbm19	100	79.140	ENSMZEG00005016607	rbm19	100	79.032	Maylandia_zebra
ENSPREG00000000978	rbm19	97	52.298	ENSMGAG00000010087	RBM19	100	52.126	Meleagris_gallopavo
ENSPREG00000000978	rbm19	99	58.132	ENSMAUG00000019290	Rbm19	99	58.836	Mesocricetus_auratus
ENSPREG00000000978	rbm19	99	58.186	ENSMICG00000014423	RBM19	99	57.604	Microcebus_murinus
ENSPREG00000000978	rbm19	99	76.017	ENSMMOG00000017839	rbm19	99	76.175	Mola_mola
ENSPREG00000000978	rbm19	99	59.579	ENSMODG00000003597	RBM19	99	59.810	Monodelphis_domestica
ENSPREG00000000978	rbm19	100	79.004	ENSMALG00000012647	rbm19	100	78.355	Monopterus_albus
ENSPREG00000000978	rbm19	99	59.333	MGP_CAROLIEiJ_G0027656	Rbm19	99	59.081	Mus_caroli
ENSPREG00000000978	rbm19	99	59.228	ENSMUSG00000029594	Rbm19	99	58.394	Mus_musculus
ENSPREG00000000978	rbm19	99	58.982	MGP_PahariEiJ_G0024238	Rbm19	99	58.934	Mus_pahari
ENSPREG00000000978	rbm19	99	58.964	MGP_SPRETEiJ_G0028656	Rbm19	99	58.854	Mus_spretus
ENSPREG00000000978	rbm19	69	62.332	ENSMPUG00000002694	RBM19	98	57.392	Mustela_putorius_furo
ENSPREG00000000978	rbm19	99	58.751	ENSMLUG00000015075	RBM19	99	59.259	Myotis_lucifugus
ENSPREG00000000978	rbm19	99	57.757	ENSNGAG00000009076	Rbm19	99	58.657	Nannospalax_galili
ENSPREG00000000978	rbm19	100	77.694	ENSNBRG00000005913	rbm19	100	78.149	Neolamprologus_brichardi
ENSPREG00000000978	rbm19	99	58.958	ENSNLEG00000000190	RBM19	99	58.506	Nomascus_leucogenys
ENSPREG00000000978	rbm19	100	50.932	ENSMEUG00000004045	RBM19	91	60.173	Notamacropus_eugenii
ENSPREG00000000978	rbm19	99	57.660	ENSOPRG00000012064	RBM19	99	58.696	Ochotona_princeps
ENSPREG00000000978	rbm19	99	57.725	ENSODEG00000012977	RBM19	99	57.878	Octodon_degus
ENSPREG00000000978	rbm19	99	76.698	ENSONIG00000013576	rbm19	100	80.360	Oreochromis_niloticus
ENSPREG00000000978	rbm19	99	58.065	ENSOCUG00000009398	RBM19	99	57.247	Oryctolagus_cuniculus
ENSPREG00000000978	rbm19	100	78.364	ENSORLG00000008077	rbm19	99	79.134	Oryzias_latipes
ENSPREG00000000978	rbm19	99	77.898	ENSORLG00020013187	rbm19	99	78.855	Oryzias_latipes_hni
ENSPREG00000000978	rbm19	100	78.149	ENSORLG00015001774	rbm19	100	78.256	Oryzias_latipes_hsok
ENSPREG00000000978	rbm19	100	79.117	ENSOMEG00000003334	rbm19	100	79.440	Oryzias_melastigma
ENSPREG00000000978	rbm19	93	56.078	ENSOGAG00000000602	RBM19	100	58.131	Otolemur_garnettii
ENSPREG00000000978	rbm19	99	58.125	ENSOARG00000006827	RBM19	99	59.516	Ovis_aries
ENSPREG00000000978	rbm19	99	59.105	ENSPPAG00000043712	RBM19	99	58.653	Pan_paniscus
ENSPREG00000000978	rbm19	99	57.458	ENSPPRG00000023027	RBM19	98	57.398	Panthera_pardus
ENSPREG00000000978	rbm19	99	54.277	ENSPTIG00000011096	RBM19	99	54.584	Panthera_tigris_altaica
ENSPREG00000000978	rbm19	99	59.105	ENSPTRG00000005494	RBM19	99	58.756	Pan_troglodytes
ENSPREG00000000978	rbm19	99	58.125	ENSPANG00000004795	RBM19	95	58.125	Papio_anubis
ENSPREG00000000978	rbm19	99	67.647	ENSPKIG00000017095	rbm19	99	67.176	Paramormyrops_kingsleyae
ENSPREG00000000978	rbm19	89	56.897	ENSPSIG00000008191	RBM19	99	57.373	Pelodiscus_sinensis
ENSPREG00000000978	rbm19	87	78.793	ENSPMGG00000019087	rbm19	100	78.339	Periophthalmus_magnuspinnatus
ENSPREG00000000978	rbm19	99	58.333	ENSPEMG00000018058	Rbm19	99	58.351	Peromyscus_maniculatus_bairdii
ENSPREG00000000978	rbm19	99	57.971	ENSPCIG00000028861	RBM19	99	58.799	Phascolarctos_cinereus
ENSPREG00000000978	rbm19	99	95.974	ENSPFOG00000015300	rbm19	99	95.974	Poecilia_formosa
ENSPREG00000000978	rbm19	100	96.413	ENSPLAG00000000059	rbm19	100	96.413	Poecilia_latipinna
ENSPREG00000000978	rbm19	99	95.647	ENSPMEG00000018585	rbm19	99	95.647	Poecilia_mexicana
ENSPREG00000000978	rbm19	99	57.500	ENSPPYG00000004993	RBM19	99	57.158	Pongo_abelii
ENSPREG00000000978	rbm19	57	63.839	ENSPCAG00000005063	-	58	63.839	Procavia_capensis
ENSPREG00000000978	rbm19	99	58.081	ENSPCOG00000016190	RBM19	99	58.463	Propithecus_coquereli
ENSPREG00000000978	rbm19	99	56.729	ENSPVAG00000011618	RBM19	99	56.980	Pteropus_vampyrus
ENSPREG00000000978	rbm19	100	77.492	ENSPNYG00000017434	rbm19	100	78.135	Pundamilia_nyererei
ENSPREG00000000978	rbm19	99	65.074	ENSPNAG00000012069	rbm19	99	65.217	Pygocentrus_nattereri
ENSPREG00000000978	rbm19	100	57.938	ENSRNOG00000001397	Rbm19	99	58.506	Rattus_norvegicus
ENSPREG00000000978	rbm19	99	58.817	ENSRBIG00000041419	RBM19	99	57.780	Rhinopithecus_bieti
ENSPREG00000000978	rbm19	99	58.610	ENSRROG00000031938	RBM19	99	58.714	Rhinopithecus_roxellana
ENSPREG00000000978	rbm19	71	37.240	YPR112C	-	71	38.776	Saccharomyces_cerevisiae
ENSPREG00000000978	rbm19	99	56.639	ENSSBOG00000021434	-	99	56.816	Saimiri_boliviensis_boliviensis
ENSPREG00000000978	rbm19	88	50.352	ENSSBOG00000022679	-	99	50.402	Saimiri_boliviensis_boliviensis
ENSPREG00000000978	rbm19	99	58.191	ENSSHAG00000012256	RBM19	99	59.431	Sarcophilus_harrisii
ENSPREG00000000978	rbm19	99	64.043	ENSSFOG00015005124	rbm19	99	63.966	Scleropages_formosus
ENSPREG00000000978	rbm19	100	79.310	ENSSMAG00000011828	rbm19	100	79.849	Scophthalmus_maximus
ENSPREG00000000978	rbm19	100	81.425	ENSSDUG00000013544	rbm19	100	81.425	Seriola_dumerili
ENSPREG00000000978	rbm19	91	81.750	ENSSLDG00000025413	rbm19	100	74.270	Seriola_lalandi_dorsalis
ENSPREG00000000978	rbm19	62	66.552	ENSSPUG00000011064	RBM19	100	66.552	Sphenodon_punctatus
ENSPREG00000000978	rbm19	97	77.877	ENSSPAG00000018685	rbm19	98	78.994	Stegastes_partitus
ENSPREG00000000978	rbm19	99	59.662	ENSSSCG00000009868	RBM19	99	60.000	Sus_scrofa
ENSPREG00000000978	rbm19	100	58.455	ENSTGUG00000009017	RBM19	99	57.724	Taeniopygia_guttata
ENSPREG00000000978	rbm19	99	74.813	ENSTRUG00000016032	rbm19	99	75.240	Takifugu_rubripes
ENSPREG00000000978	rbm19	59	81.040	ENSTNIG00000015903	rbm19	99	79.817	Tetraodon_nigroviridis
ENSPREG00000000978	rbm19	69	78.689	ENSTBEG00000000703	RBM19	69	78.689	Tupaia_belangeri
ENSPREG00000000978	rbm19	83	59.016	ENSTTRG00000003987	RBM19	84	58.689	Tursiops_truncatus
ENSPREG00000000978	rbm19	98	56.947	ENSUAMG00000002076	RBM19	98	57.474	Ursus_americanus
ENSPREG00000000978	rbm19	99	57.380	ENSUMAG00000010816	RBM19	99	57.900	Ursus_maritimus
ENSPREG00000000978	rbm19	99	58.125	ENSVVUG00000007886	RBM19	98	58.229	Vulpes_vulpes
ENSPREG00000000978	rbm19	99	59.509	ENSXETG00000017668	rbm19	99	59.192	Xenopus_tropicalis
ENSPREG00000000978	rbm19	100	90.938	ENSXCOG00000016995	rbm19	100	91.684	Xiphophorus_couchianus
ENSPREG00000000978	rbm19	100	93.268	ENSXMAG00000007641	rbm19	100	94.354	Xiphophorus_maculatus