EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001040 (Gene tree)
Gene ID: -
Gene Symbol: srsf6a
Alias: -
Full Name: serine/arginine-rich splicing factor 6a
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2386 bases
Position: chrLG7:29818952-29821337
Accession: ZDB-GENE-040426-2824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001423	RRM_1	PF00076.22	2.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001464	-	450	-	ENSPREP00000001423	149 (aa)	-	-

Gene Model

Click here to download ENSPREG00000001040's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001040	srsf6a	86	40.299	ENSPREG00000016792	-	50	41.045
ENSPREG00000001040	srsf6a	56	42.529	ENSPREG00000004340	srsf3b	62	44.872
ENSPREG00000001040	srsf6a	56	40.698	ENSPREG00000002610	-	51	43.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001040	srsf6a	87	83.846	ENSG00000124193	SRSF6	59	91.139	Homo_sapiens
ENSPREG00000001040	srsf6a	98	85.135	ENSAPOG00000016635	-	83	93.233	Acanthochromis_polyacanthus
ENSPREG00000001040	srsf6a	87	81.538	ENSACIG00000020091	-	95	80.000	Amphilophus_citrinellus
ENSPREG00000001040	srsf6a	56	95.181	ENSAOCG00000019438	-	73	95.181	Amphiprion_ocellaris
ENSPREG00000001040	srsf6a	87	83.846	ENSANAG00000024080	SRSF6	59	91.139	Aotus_nancymaae
ENSPREG00000001040	srsf6a	87	90.769	ENSAMXG00000042692	-	98	83.942	Astyanax_mexicanus
ENSPREG00000001040	srsf6a	87	83.846	ENSBTAG00000008527	SRSF6	59	92.405	Bos_taurus
ENSPREG00000001040	srsf6a	87	83.846	ENSCJAG00000048403	SRSF6	59	91.139	Callithrix_jacchus
ENSPREG00000001040	srsf6a	87	83.846	ENSCAFG00000009289	SRSF6	59	92.405	Canis_familiaris
ENSPREG00000001040	srsf6a	87	83.846	ENSCAFG00020013559	SRSF6	59	92.405	Canis_lupus_dingo
ENSPREG00000001040	srsf6a	87	83.846	ENSCHIG00000015890	-	59	92.405	Capra_hircus
ENSPREG00000001040	srsf6a	87	83.846	ENSCPOG00000011761	SRSF6	59	91.139	Cavia_porcellus
ENSPREG00000001040	srsf6a	87	83.846	ENSCCAG00000026018	-	59	91.139	Cebus_capucinus
ENSPREG00000001040	srsf6a	87	83.846	ENSCATG00000030794	SRSF6	59	91.139	Cercocebus_atys
ENSPREG00000001040	srsf6a	87	83.846	ENSCLAG00000010247	SRSF6	59	91.139	Chinchilla_lanigera
ENSPREG00000001040	srsf6a	87	83.846	ENSCGRG00001022339	Srsf6	58	92.308	Cricetulus_griseus_chok1gshd
ENSPREG00000001040	srsf6a	89	79.699	ENSCSEG00000019778	SRSF6	92	80.303	Cynoglossus_semilaevis
ENSPREG00000001040	srsf6a	88	87.023	ENSCVAG00000001863	SRSF6	95	87.023	Cyprinodon_variegatus
ENSPREG00000001040	srsf6a	87	87.023	ENSDARG00000016783	srsf6b	83	93.671	Danio_rerio
ENSPREG00000001040	srsf6a	87	83.846	ENSDORG00000028378	Srsf6	59	91.139	Dipodomys_ordii
ENSPREG00000001040	srsf6a	87	87.692	ENSELUG00000013506	SRSF6	71	92.405	Esox_lucius
ENSPREG00000001040	srsf6a	89	83.942	ENSELUG00000024182	SRSF6	90	86.992	Esox_lucius
ENSPREG00000001040	srsf6a	87	83.206	ENSGALG00000000990	SRSF6	58	94.872	Gallus_gallus
ENSPREG00000001040	srsf6a	100	87.248	ENSGAFG00000019088	-	86	87.248	Gambusia_affinis
ENSPREG00000001040	srsf6a	87	83.846	ENSGGOG00000009808	SRSF6	59	91.139	Gorilla_gorilla
ENSPREG00000001040	srsf6a	87	83.846	ENSHGLG00000007348	SRSF6	59	91.139	Heterocephalus_glaber_female
ENSPREG00000001040	srsf6a	87	83.846	ENSSTOG00000010866	SRSF6	59	91.139	Ictidomys_tridecemlineatus
ENSPREG00000001040	srsf6a	87	83.846	ENSMFAG00000036925	SRSF6	59	91.139	Macaca_fascicularis
ENSPREG00000001040	srsf6a	87	83.846	ENSMMUG00000006742	SRSF6	59	91.139	Macaca_mulatta
ENSPREG00000001040	srsf6a	87	83.077	ENSMNEG00000027392	-	59	89.873	Macaca_nemestrina
ENSPREG00000001040	srsf6a	64	81.250	ENSMAMG00000023477	-	82	92.105	Mastacembelus_armatus
ENSPREG00000001040	srsf6a	66	77.000	ENSMAUG00000019086	-	58	92.308	Mesocricetus_auratus
ENSPREG00000001040	srsf6a	87	83.846	ENSMICG00000008537	SRSF6	59	91.139	Microcebus_murinus
ENSPREG00000001040	srsf6a	63	95.745	ENSMMOG00000015241	-	88	95.745	Mola_mola
ENSPREG00000001040	srsf6a	87	83.846	MGP_CAROLIEiJ_G0024606	Srsf6	58	92.308	Mus_caroli
ENSPREG00000001040	srsf6a	87	83.846	ENSMUSG00000016921	Srsf6	58	92.308	Mus_musculus
ENSPREG00000001040	srsf6a	87	83.846	MGP_PahariEiJ_G0026050	Srsf6	58	92.308	Mus_pahari
ENSPREG00000001040	srsf6a	87	83.846	MGP_SPRETEiJ_G0025528	Srsf6	58	92.308	Mus_spretus
ENSPREG00000001040	srsf6a	87	83.846	ENSNGAG00000017560	Srsf6	59	91.139	Nannospalax_galili
ENSPREG00000001040	srsf6a	87	83.846	ENSNLEG00000006524	SRSF6	59	91.139	Nomascus_leucogenys
ENSPREG00000001040	srsf6a	66	77.000	ENSODEG00000016510	-	59	91.139	Octodon_degus
ENSPREG00000001040	srsf6a	85	81.102	ENSORLG00020017506	srsf6a	74	81.102	Oryzias_latipes_hni
ENSPREG00000001040	srsf6a	87	83.846	ENSPTRG00000044686	-	59	91.139	Pan_troglodytes
ENSPREG00000001040	srsf6a	87	83.846	ENSPANG00000035224	SRSF6	59	91.139	Papio_anubis
ENSPREG00000001040	srsf6a	87	90.769	ENSPKIG00000018463	-	78	94.937	Paramormyrops_kingsleyae
ENSPREG00000001040	srsf6a	91	86.131	ENSPKIG00000015603	-	93	85.401	Paramormyrops_kingsleyae
ENSPREG00000001040	srsf6a	85	72.441	ENSPKIG00000015703	-	83	68.644	Paramormyrops_kingsleyae
ENSPREG00000001040	srsf6a	87	84.615	ENSPCIG00000003820	SRSF6	59	93.671	Phascolarctos_cinereus
ENSPREG00000001040	srsf6a	87	100.000	ENSPLAG00000009243	srsf6a	79	100.000	Poecilia_latipinna
ENSPREG00000001040	srsf6a	87	83.846	ENSPCOG00000026364	SRSF6	59	91.139	Propithecus_coquereli
ENSPREG00000001040	srsf6a	89	84.848	ENSPNAG00000023179	-	95	82.576	Pygocentrus_nattereri
ENSPREG00000001040	srsf6a	87	82.308	ENSRBIG00000041414	SRSF6	61	91.139	Rhinopithecus_bieti
ENSPREG00000001040	srsf6a	87	83.846	ENSRROG00000029989	SRSF6	59	91.139	Rhinopithecus_roxellana
ENSPREG00000001040	srsf6a	87	83.846	ENSSBOG00000033708	-	59	91.139	Saimiri_boliviensis_boliviensis
ENSPREG00000001040	srsf6a	54	96.250	ENSSMAG00000014861	-	99	68.382	Scophthalmus_maximus
ENSPREG00000001040	srsf6a	64	82.105	ENSSDUG00000011036	-	83	92.105	Seriola_dumerili
ENSPREG00000001040	srsf6a	64	82.105	ENSSLDG00000014858	-	83	92.105	Seriola_lalandi_dorsalis
ENSPREG00000001040	srsf6a	87	83.846	ENSSPUG00000004967	SRSF6	58	94.872	Sphenodon_punctatus
ENSPREG00000001040	srsf6a	64	80.208	ENSSPAG00000021913	-	79	90.789	Stegastes_partitus
ENSPREG00000001040	srsf6a	54	97.500	ENSTRUG00000021397	-	87	97.500	Takifugu_rubripes
ENSPREG00000001040	srsf6a	87	83.846	ENSUAMG00000003559	SRSF6	59	92.405	Ursus_americanus
ENSPREG00000001040	srsf6a	56	59.036	ENSVVUG00000019276	-	55	60.256	Vulpes_vulpes