EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001114 (Gene tree)
Gene ID: 103457560
Gene Symbol: parp1
Alias: -
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 15940 bases
Position: chrLG21:7487844-7503783
Accession: 103457560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001596	PARP	PF00644.20	1.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001638	-	5318	XM_008397803	ENSPREP00000001596	1015 (aa)	XP_008396025	UPI0004A26D56

Gene Model

Click here to download ENSPREG00000001114's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03410	Base excision repair	KEGG
pret04210	Apoptosis	KEGG
pret04217	Necroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001114	parp1	52	42.910	ENSPREG00000001464	parp2	82	42.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001114	parp1	99	70.768	ENSG00000143799	PARP1	99	70.768	Homo_sapiens
ENSPREG00000001114	parp1	100	89.951	ENSAPOG00000006414	parp1	100	89.951	Acanthochromis_polyacanthus
ENSPREG00000001114	parp1	96	70.040	ENSAMEG00000014451	PARP1	100	70.040	Ailuropoda_melanoleuca
ENSPREG00000001114	parp1	100	90.049	ENSACIG00000005651	parp1	100	90.049	Amphilophus_citrinellus
ENSPREG00000001114	parp1	100	91.527	ENSAOCG00000021005	parp1	100	91.527	Amphiprion_ocellaris
ENSPREG00000001114	parp1	100	91.527	ENSAPEG00000004784	parp1	100	91.527	Amphiprion_percula
ENSPREG00000001114	parp1	100	90.148	ENSATEG00000010457	parp1	100	90.148	Anabas_testudineus
ENSPREG00000001114	parp1	87	72.933	ENSAPLG00000014039	PARP1	99	72.254	Anas_platyrhynchos
ENSPREG00000001114	parp1	99	72.020	ENSACAG00000006189	PARP1	99	72.315	Anolis_carolinensis
ENSPREG00000001114	parp1	99	71.063	ENSANAG00000032699	PARP1	99	71.457	Aotus_nancymaae
ENSPREG00000001114	parp1	100	89.655	ENSACLG00000015489	parp1	100	89.655	Astatotilapia_calliptera
ENSPREG00000001114	parp1	100	82.111	ENSAMXG00000006465	parp1	100	81.996	Astyanax_mexicanus
ENSPREG00000001114	parp1	99	68.338	ENSBTAG00000000837	PARP1	99	68.732	Bos_taurus
ENSPREG00000001114	parp1	86	44.422	WBGene00004049	parp-1	100	46.743	Caenorhabditis_elegans
ENSPREG00000001114	parp1	99	70.276	ENSCJAG00000012831	PARP1	99	70.669	Callithrix_jacchus
ENSPREG00000001114	parp1	96	69.765	ENSCAFG00000016089	PARP1	100	69.969	Canis_familiaris
ENSPREG00000001114	parp1	99	70.374	ENSCAFG00020001660	PARP1	99	70.571	Canis_lupus_dingo
ENSPREG00000001114	parp1	99	68.898	ENSCHIG00000018072	PARP1	99	69.223	Capra_hircus
ENSPREG00000001114	parp1	90	71.506	ENSTSYG00000003699	PARP1	100	71.506	Carlito_syrichta
ENSPREG00000001114	parp1	99	58.494	ENSCAPG00000011113	-	99	58.297	Cavia_aperea
ENSPREG00000001114	parp1	99	70.049	ENSCPOG00000015643	-	99	70.049	Cavia_porcellus
ENSPREG00000001114	parp1	99	71.161	ENSCCAG00000033484	PARP1	99	71.161	Cebus_capucinus
ENSPREG00000001114	parp1	99	70.472	ENSCATG00000038981	PARP1	99	70.472	Cercocebus_atys
ENSPREG00000001114	parp1	99	70.049	ENSCLAG00000006637	PARP1	99	70.049	Chinchilla_lanigera
ENSPREG00000001114	parp1	66	78.906	ENSCHOG00000003539	PARP1	59	78.906	Choloepus_hoffmanni
ENSPREG00000001114	parp1	99	73.228	ENSCPBG00000011958	PARP1	99	73.228	Chrysemys_picta_bellii
ENSPREG00000001114	parp1	98	69.069	ENSCANG00000041340	PARP1	100	69.929	Colobus_angolensis_palliatus
ENSPREG00000001114	parp1	99	69.951	ENSCGRG00001020559	Parp1	99	70.443	Cricetulus_griseus_chok1gshd
ENSPREG00000001114	parp1	99	69.490	ENSCGRG00000004864	Parp1	100	70.000	Cricetulus_griseus_crigri
ENSPREG00000001114	parp1	100	88.269	ENSCSEG00000020665	parp1	100	88.269	Cynoglossus_semilaevis
ENSPREG00000001114	parp1	99	93.047	ENSCVAG00000021372	parp1	99	93.047	Cyprinodon_variegatus
ENSPREG00000001114	parp1	100	83.104	ENSDARG00000019529	parp1	100	83.284	Danio_rerio
ENSPREG00000001114	parp1	96	68.916	ENSDNOG00000012059	PARP1	100	69.734	Dasypus_novemcinctus
ENSPREG00000001114	parp1	99	68.673	ENSDORG00000005234	Parp1	100	69.082	Dipodomys_ordii
ENSPREG00000001114	parp1	99	41.847	FBgn0010247	Parp	99	41.519	Drosophila_melanogaster
ENSPREG00000001114	parp1	87	79.688	ENSETEG00000013254	PARP1	88	79.688	Echinops_telfairi
ENSPREG00000001114	parp1	97	58.952	ENSEBUG00000005820	parp1	100	58.717	Eptatretus_burgeri
ENSPREG00000001114	parp1	98	70.040	ENSEASG00005013275	PARP1	99	70.641	Equus_asinus_asinus
ENSPREG00000001114	parp1	99	69.587	ENSECAG00000019207	PARP1	99	70.472	Equus_caballus
ENSPREG00000001114	parp1	99	67.453	ENSEEUG00000012253	PARP1	99	67.748	Erinaceus_europaeus
ENSPREG00000001114	parp1	99	83.665	ENSELUG00000017336	parp1	100	82.266	Esox_lucius
ENSPREG00000001114	parp1	97	69.706	ENSFCAG00000005777	PARP1	100	70.071	Felis_catus
ENSPREG00000001114	parp1	99	72.597	ENSFALG00000011578	PARP1	100	73.108	Ficedula_albicollis
ENSPREG00000001114	parp1	99	68.909	ENSFDAG00000017662	PARP1	100	68.909	Fukomys_damarensis
ENSPREG00000001114	parp1	100	93.202	ENSFHEG00000001117	parp1	100	93.202	Fundulus_heteroclitus
ENSPREG00000001114	parp1	99	82.613	ENSGMOG00000014929	parp1	100	82.613	Gadus_morhua
ENSPREG00000001114	parp1	99	72.655	ENSGALG00000009228	PARP1	99	73.050	Gallus_gallus
ENSPREG00000001114	parp1	100	97.537	ENSGAFG00000010450	parp1	100	97.537	Gambusia_affinis
ENSPREG00000001114	parp1	100	88.201	ENSGACG00000011280	parp1	100	88.201	Gasterosteus_aculeatus
ENSPREG00000001114	parp1	99	72.063	ENSGAGG00000010066	PARP1	99	72.414	Gopherus_agassizii
ENSPREG00000001114	parp1	99	70.571	ENSGGOG00000006308	PARP1	99	70.571	Gorilla_gorilla
ENSPREG00000001114	parp1	100	90.443	ENSHBUG00000010490	parp1	100	90.443	Haplochromis_burtoni
ENSPREG00000001114	parp1	96	69.215	ENSHGLG00000003992	PARP1	93	69.215	Heterocephalus_glaber_female
ENSPREG00000001114	parp1	96	69.215	ENSHGLG00100016965	PARP1	93	69.215	Heterocephalus_glaber_male
ENSPREG00000001114	parp1	100	85.588	ENSHCOG00000011619	parp1	100	86.275	Hippocampus_comes
ENSPREG00000001114	parp1	100	81.854	ENSIPUG00000020250	parp1	100	81.561	Ictalurus_punctatus
ENSPREG00000001114	parp1	99	70.472	ENSSTOG00000016000	PARP1	99	70.472	Ictidomys_tridecemlineatus
ENSPREG00000001114	parp1	99	69.163	ENSJJAG00000023497	Parp1	99	69.852	Jaculus_jaculus
ENSPREG00000001114	parp1	100	90.542	ENSKMAG00000011627	parp1	100	90.542	Kryptolebias_marmoratus
ENSPREG00000001114	parp1	100	90.049	ENSLBEG00000013376	parp1	100	90.049	Labrus_bergylta
ENSPREG00000001114	parp1	99	56.287	ENSLACG00000002735	PARP1	99	56.471	Latimeria_chalumnae
ENSPREG00000001114	parp1	100	79.646	ENSLOCG00000015798	parp1	100	79.824	Lepisosteus_oculatus
ENSPREG00000001114	parp1	99	68.502	ENSLAFG00000007830	PARP1	100	68.807	Loxodonta_africana
ENSPREG00000001114	parp1	99	70.472	ENSMFAG00000002526	PARP1	99	70.472	Macaca_fascicularis
ENSPREG00000001114	parp1	99	70.571	ENSMMUG00000021820	PARP1	99	70.571	Macaca_mulatta
ENSPREG00000001114	parp1	99	70.472	ENSMNEG00000034074	PARP1	99	70.472	Macaca_nemestrina
ENSPREG00000001114	parp1	99	68.695	ENSMLEG00000012344	PARP1	99	68.695	Mandrillus_leucophaeus
ENSPREG00000001114	parp1	100	90.837	ENSMAMG00000020652	parp1	100	90.837	Mastacembelus_armatus
ENSPREG00000001114	parp1	100	90.739	ENSMZEG00005016907	parp1	100	90.739	Maylandia_zebra
ENSPREG00000001114	parp1	99	72.671	ENSMGAG00000007760	PARP1	100	72.671	Meleagris_gallopavo
ENSPREG00000001114	parp1	99	69.951	ENSMAUG00000008306	Parp1	99	69.951	Mesocricetus_auratus
ENSPREG00000001114	parp1	99	67.421	ENSMICG00000017076	PARP1	99	67.421	Microcebus_murinus
ENSPREG00000001114	parp1	99	70.049	ENSMOCG00000014315	Parp1	99	70.148	Microtus_ochrogaster
ENSPREG00000001114	parp1	100	88.627	ENSMMOG00000015966	parp1	100	87.647	Mola_mola
ENSPREG00000001114	parp1	99	71.499	ENSMODG00000006076	PARP1	99	71.499	Monodelphis_domestica
ENSPREG00000001114	parp1	100	86.798	ENSMALG00000004057	parp1	100	86.798	Monopterus_albus
ENSPREG00000001114	parp1	99	70.571	MGP_CAROLIEiJ_G0014978	Parp1	100	79.592	Mus_caroli
ENSPREG00000001114	parp1	99	70.472	ENSMUSG00000026496	Parp1	99	79.592	Mus_musculus
ENSPREG00000001114	parp1	99	70.472	MGP_SPRETEiJ_G0015777	Parp1	100	79.592	Mus_spretus
ENSPREG00000001114	parp1	99	70.530	ENSMPUG00000004585	PARP1	99	70.530	Mustela_putorius_furo
ENSPREG00000001114	parp1	90	58.983	ENSMLUG00000012285	PARP1	100	59.199	Myotis_lucifugus
ENSPREG00000001114	parp1	99	69.360	ENSNGAG00000003885	Parp1	99	69.754	Nannospalax_galili
ENSPREG00000001114	parp1	100	89.360	ENSNBRG00000017434	parp1	100	89.360	Neolamprologus_brichardi
ENSPREG00000001114	parp1	95	76.215	ENSNLEG00000013905	PARP1	99	76.215	Nomascus_leucogenys
ENSPREG00000001114	parp1	67	79.403	ENSMEUG00000007720	PARP1	87	79.403	Notamacropus_eugenii
ENSPREG00000001114	parp1	99	71.260	ENSOPRG00000011722	PARP1	99	71.555	Ochotona_princeps
ENSPREG00000001114	parp1	99	69.027	ENSODEG00000007424	PARP1	99	69.322	Octodon_degus
ENSPREG00000001114	parp1	100	90.148	ENSONIG00000013486	parp1	100	90.148	Oreochromis_niloticus
ENSPREG00000001114	parp1	99	71.910	ENSOANG00000001488	PARP1	100	72.114	Ornithorhynchus_anatinus
ENSPREG00000001114	parp1	99	70.403	ENSOCUG00000017820	PARP1	99	71.288	Oryctolagus_cuniculus
ENSPREG00000001114	parp1	100	88.374	ENSORLG00000013691	parp1	100	88.374	Oryzias_latipes
ENSPREG00000001114	parp1	99	88.289	ENSORLG00020001074	parp1	99	88.289	Oryzias_latipes_hni
ENSPREG00000001114	parp1	100	88.276	ENSORLG00015007090	parp1	100	88.276	Oryzias_latipes_hsok
ENSPREG00000001114	parp1	99	70.079	ENSOGAG00000016206	PARP1	99	70.079	Otolemur_garnettii
ENSPREG00000001114	parp1	99	68.732	ENSOARG00000000811	PARP1	99	69.223	Ovis_aries
ENSPREG00000001114	parp1	99	70.374	ENSPPAG00000040862	PARP1	99	70.374	Pan_paniscus
ENSPREG00000001114	parp1	96	69.419	ENSPPRG00000003528	PARP1	100	69.481	Panthera_pardus
ENSPREG00000001114	parp1	93	58.577	ENSPTIG00000009102	PARP1	98	58.447	Panthera_tigris_altaica
ENSPREG00000001114	parp1	99	70.374	ENSPTRG00000002049	PARP1	99	70.374	Pan_troglodytes
ENSPREG00000001114	parp1	99	70.600	ENSPANG00000011198	PARP1	99	70.600	Papio_anubis
ENSPREG00000001114	parp1	100	80.728	ENSPKIG00000006039	parp1	100	80.728	Paramormyrops_kingsleyae
ENSPREG00000001114	parp1	99	72.171	ENSPSIG00000016374	PARP1	100	72.403	Pelodiscus_sinensis
ENSPREG00000001114	parp1	100	83.513	ENSPMGG00000008936	parp1	100	83.513	Periophthalmus_magnuspinnatus
ENSPREG00000001114	parp1	99	70.640	ENSPEMG00000020230	Parp1	99	70.640	Peromyscus_maniculatus_bairdii
ENSPREG00000001114	parp1	99	71.133	ENSPCIG00000006436	PARP1	99	71.527	Phascolarctos_cinereus
ENSPREG00000001114	parp1	100	96.650	ENSPFOG00000002342	parp1	100	96.650	Poecilia_formosa
ENSPREG00000001114	parp1	100	98.325	ENSPLAG00000000909	parp1	100	98.325	Poecilia_latipinna
ENSPREG00000001114	parp1	100	98.818	ENSPMEG00000013979	parp1	100	98.818	Poecilia_mexicana
ENSPREG00000001114	parp1	99	70.174	ENSPPYG00000000164	PARP1	100	70.174	Pongo_abelii
ENSPREG00000001114	parp1	60	78.704	ENSPCAG00000005558	-	59	78.704	Procavia_capensis
ENSPREG00000001114	parp1	99	70.472	ENSPCOG00000016918	PARP1	99	70.825	Propithecus_coquereli
ENSPREG00000001114	parp1	91	77.358	ENSPVAG00000005543	PARP1	91	77.358	Pteropus_vampyrus
ENSPREG00000001114	parp1	100	89.655	ENSPNYG00000009702	parp1	100	89.655	Pundamilia_nyererei
ENSPREG00000001114	parp1	100	82.387	ENSPNAG00000002787	parp1	100	83.578	Pygocentrus_nattereri
ENSPREG00000001114	parp1	99	70.079	ENSRNOG00000003084	Parp1	99	70.374	Rattus_norvegicus
ENSPREG00000001114	parp1	99	70.472	ENSRBIG00000044893	PARP1	99	71.360	Rhinopithecus_bieti
ENSPREG00000001114	parp1	99	70.472	ENSRROG00000029280	PARP1	99	71.360	Rhinopithecus_roxellana
ENSPREG00000001114	parp1	99	53.208	ENSRROG00000040615	-	97	60.260	Rhinopithecus_roxellana
ENSPREG00000001114	parp1	99	71.358	ENSSBOG00000010144	PARP1	99	71.358	Saimiri_boliviensis_boliviensis
ENSPREG00000001114	parp1	99	71.166	ENSSHAG00000001991	PARP1	100	71.472	Sarcophilus_harrisii
ENSPREG00000001114	parp1	100	81.631	ENSSFOG00015020017	parp1	100	81.532	Scleropages_formosus
ENSPREG00000001114	parp1	100	88.670	ENSSMAG00000013799	parp1	100	88.670	Scophthalmus_maximus
ENSPREG00000001114	parp1	100	91.034	ENSSDUG00000016626	parp1	100	91.034	Seriola_dumerili
ENSPREG00000001114	parp1	100	90.837	ENSSLDG00000006384	parp1	100	90.837	Seriola_lalandi_dorsalis
ENSPREG00000001114	parp1	53	76.852	ENSSARG00000009436	-	59	76.852	Sorex_araneus
ENSPREG00000001114	parp1	99	67.885	ENSSPUG00000007790	PARP1	99	68.639	Sphenodon_punctatus
ENSPREG00000001114	parp1	100	87.598	ENSSPAG00000019074	parp1	100	91.075	Stegastes_partitus
ENSPREG00000001114	parp1	99	69.488	ENSSSCG00000023660	PARP1	99	69.941	Sus_scrofa
ENSPREG00000001114	parp1	97	71.982	ENSTGUG00000004260	-	100	72.536	Taeniopygia_guttata
ENSPREG00000001114	parp1	100	86.897	ENSTRUG00000014490	parp1	100	86.897	Takifugu_rubripes
ENSPREG00000001114	parp1	100	85.435	ENSTNIG00000016384	parp1	100	85.337	Tetraodon_nigroviridis
ENSPREG00000001114	parp1	82	76.863	ENSTBEG00000002364	PARP1	92	76.863	Tupaia_belangeri
ENSPREG00000001114	parp1	99	65.256	ENSTTRG00000000188	PARP1	99	66.043	Tursiops_truncatus
ENSPREG00000001114	parp1	96	70.265	ENSUAMG00000014388	PARP1	100	70.265	Ursus_americanus
ENSPREG00000001114	parp1	96	63.618	ENSUMAG00000014555	PARP1	99	63.720	Ursus_maritimus
ENSPREG00000001114	parp1	83	78.431	ENSVPAG00000011411	PARP1	83	78.431	Vicugna_pacos
ENSPREG00000001114	parp1	96	69.663	ENSVVUG00000001655	PARP1	100	69.969	Vulpes_vulpes
ENSPREG00000001114	parp1	98	69.192	ENSXETG00000022610	parp1	99	68.651	Xenopus_tropicalis
ENSPREG00000001114	parp1	100	97.340	ENSXMAG00000003632	parp1	100	97.340	Xiphophorus_maculatus