EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001147 (Gene tree)
Gene ID: 103467761
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: scratch family transcriptional repressor 2
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 7283 bases
Position: chrLG7:16854882-16862164
Accession: 103467761
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001539	zf-C2H2	PF00096.26	3.2e-25	1	4
ENSPREP00000001539	zf-C2H2	PF00096.26	3.2e-25	2	4
ENSPREP00000001539	zf-C2H2	PF00096.26	3.2e-25	3	4
ENSPREP00000001539	zf-C2H2	PF00096.26	3.2e-25	4	4
ENSPREP00000001539	zf-met	PF12874.7	1.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001580	-	2969	XM_008414428	ENSPREP00000001539	319 (aa)	XP_008412650	UPI0004A276CC

Gene Model

Click here to download ENSPREG00000001147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001147	scrt2	60	36.184	ENSPREG00000018366	prdm5	51	36.735
ENSPREG00000001147	scrt2	97	65.049	ENSPREG00000018985	scrt1b	96	65.049
ENSPREG00000001147	scrt2	79	39.841	ENSPREG00000008528	SNAI2	86	40.239
ENSPREG00000001147	scrt2	62	38.732	ENSPREG00000011741	-	82	40.441
ENSPREG00000001147	scrt2	53	46.237	ENSPREG00000002715	-	79	40.741
ENSPREG00000001147	scrt2	53	32.418	ENSPREG00000016270	-	84	31.818
ENSPREG00000001147	scrt2	99	58.537	ENSPREG00000012166	-	100	58.537
ENSPREG00000001147	scrt2	59	34.545	ENSPREG00000014105	-	82	36.792

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001147	scrt2	100	96.865	ENSAPOG00000003680	scrt2	100	96.865	Acanthochromis_polyacanthus
ENSPREG00000001147	scrt2	97	60.577	ENSAPOG00000015197	-	97	60.577	Acanthochromis_polyacanthus
ENSPREG00000001147	scrt2	97	65.806	ENSAPOG00000009279	scrt1b	96	64.839	Acanthochromis_polyacanthus
ENSPREG00000001147	scrt2	100	84.013	ENSACIG00000012604	scrt2	100	84.013	Amphilophus_citrinellus
ENSPREG00000001147	scrt2	97	62.903	ENSACIG00000013613	scrt1b	96	62.903	Amphilophus_citrinellus
ENSPREG00000001147	scrt2	100	62.963	ENSACIG00000001296	-	100	63.272	Amphilophus_citrinellus
ENSPREG00000001147	scrt2	97	60.188	ENSACIG00000006586	-	97	60.188	Amphilophus_citrinellus
ENSPREG00000001147	scrt2	97	59.561	ENSAOCG00000023304	-	97	59.561	Amphiprion_ocellaris
ENSPREG00000001147	scrt2	97	65.806	ENSAOCG00000003910	scrt1b	96	64.839	Amphiprion_ocellaris
ENSPREG00000001147	scrt2	100	96.865	ENSAOCG00000021557	scrt2	100	96.865	Amphiprion_ocellaris
ENSPREG00000001147	scrt2	97	65.806	ENSAPEG00000000869	scrt1b	96	64.839	Amphiprion_percula
ENSPREG00000001147	scrt2	100	96.865	ENSAPEG00000022558	scrt2	100	96.865	Amphiprion_percula
ENSPREG00000001147	scrt2	97	59.561	ENSAPEG00000005677	-	97	59.561	Amphiprion_percula
ENSPREG00000001147	scrt2	97	61.415	ENSATEG00000011660	-	97	61.415	Anabas_testudineus
ENSPREG00000001147	scrt2	100	62.727	ENSATEG00000003195	-	100	62.727	Anabas_testudineus
ENSPREG00000001147	scrt2	97	65.484	ENSATEG00000002302	scrt1b	96	65.484	Anabas_testudineus
ENSPREG00000001147	scrt2	100	94.984	ENSATEG00000023998	scrt2	100	94.984	Anabas_testudineus
ENSPREG00000001147	scrt2	74	70.213	ENSACAG00000016109	SCRT2	95	70.213	Anolis_carolinensis
ENSPREG00000001147	scrt2	97	64.516	ENSACLG00000007162	scrt1b	96	64.516	Astatotilapia_calliptera
ENSPREG00000001147	scrt2	97	59.752	ENSACLG00000012046	-	97	59.752	Astatotilapia_calliptera
ENSPREG00000001147	scrt2	97	64.744	ENSAMXG00000042624	SCRT1	98	64.744	Astyanax_mexicanus
ENSPREG00000001147	scrt2	89	77.193	ENSAMXG00000034158	scrt2	97	77.193	Astyanax_mexicanus
ENSPREG00000001147	scrt2	97	65.696	ENSAMXG00000038085	scrt1a	97	65.696	Astyanax_mexicanus
ENSPREG00000001147	scrt2	56	56.667	WBGene00000468	ces-1	59	55.000	Caenorhabditis_elegans
ENSPREG00000001147	scrt2	97	64.839	ENSCPBG00000018899	SCRT1	97	64.839	Chrysemys_picta_bellii
ENSPREG00000001147	scrt2	88	60.714	ENSCPBG00000027613	SCRT2	100	60.714	Chrysemys_picta_bellii
ENSPREG00000001147	scrt2	97	64.401	ENSCSEG00000008596	scrt1b	96	64.401	Cynoglossus_semilaevis
ENSPREG00000001147	scrt2	100	91.536	ENSCSEG00000021542	scrt2	100	91.536	Cynoglossus_semilaevis
ENSPREG00000001147	scrt2	97	59.502	ENSCSEG00000014892	-	97	59.502	Cynoglossus_semilaevis
ENSPREG00000001147	scrt2	97	65.049	ENSCVAG00000009561	scrt1b	96	65.049	Cyprinodon_variegatus
ENSPREG00000001147	scrt2	100	99.060	ENSCVAG00000021038	scrt2	100	99.060	Cyprinodon_variegatus
ENSPREG00000001147	scrt2	99	59.756	ENSCVAG00000003190	-	100	59.756	Cyprinodon_variegatus
ENSPREG00000001147	scrt2	97	65.696	ENSDARG00000040214	scrt1b	97	65.696	Danio_rerio
ENSPREG00000001147	scrt2	97	65.049	ENSDARG00000100821	scrt1a	97	65.049	Danio_rerio
ENSPREG00000001147	scrt2	97	66.019	ENSELUG00000005435	scrt1b	96	66.019	Esox_lucius
ENSPREG00000001147	scrt2	100	86.810	ENSELUG00000023883	scrt2	100	87.730	Esox_lucius
ENSPREG00000001147	scrt2	97	65.909	ENSELUG00000022228	scrt1a	96	65.909	Esox_lucius
ENSPREG00000001147	scrt2	80	65.759	ENSFALG00000005718	SCRT2	97	66.926	Ficedula_albicollis
ENSPREG00000001147	scrt2	100	87.147	ENSFHEG00000005732	scrt2	100	87.147	Fundulus_heteroclitus
ENSPREG00000001147	scrt2	97	64.401	ENSFHEG00000014820	scrt1b	96	64.401	Fundulus_heteroclitus
ENSPREG00000001147	scrt2	97	59.875	ENSFHEG00000009794	-	97	59.875	Fundulus_heteroclitus
ENSPREG00000001147	scrt2	99	78.116	ENSGMOG00000019519	scrt2	99	78.116	Gadus_morhua
ENSPREG00000001147	scrt2	96	64.286	ENSGMOG00000000629	scrt1b	96	64.286	Gadus_morhua
ENSPREG00000001147	scrt2	97	59.223	ENSGALG00000028912	SCRT2	97	59.871	Gallus_gallus
ENSPREG00000001147	scrt2	97	65.049	ENSGAFG00000007636	scrt1b	96	65.049	Gambusia_affinis
ENSPREG00000001147	scrt2	100	93.103	ENSGAFG00000003093	scrt2	100	93.103	Gambusia_affinis
ENSPREG00000001147	scrt2	99	58.307	ENSGAFG00000009650	-	100	58.307	Gambusia_affinis
ENSPREG00000001147	scrt2	97	59.062	ENSGACG00000004072	-	97	59.062	Gasterosteus_aculeatus
ENSPREG00000001147	scrt2	96	62.662	ENSGACG00000008982	scrt1b	96	62.662	Gasterosteus_aculeatus
ENSPREG00000001147	scrt2	97	63.871	ENSGAGG00000011736	SCRT1	98	63.871	Gopherus_agassizii
ENSPREG00000001147	scrt2	66	72.986	ENSGAGG00000020760	-	74	72.986	Gopherus_agassizii
ENSPREG00000001147	scrt2	100	61.129	ENSGAGG00000020761	SCRT2	100	61.129	Gopherus_agassizii
ENSPREG00000001147	scrt2	97	64.516	ENSHBUG00000016621	scrt1b	96	64.516	Haplochromis_burtoni
ENSPREG00000001147	scrt2	100	96.552	ENSHBUG00000012492	scrt2	100	96.552	Haplochromis_burtoni
ENSPREG00000001147	scrt2	97	59.875	ENSHBUG00000019101	-	97	59.875	Haplochromis_burtoni
ENSPREG00000001147	scrt2	97	59.295	ENSHCOG00000016179	-	97	59.936	Hippocampus_comes
ENSPREG00000001147	scrt2	97	64.401	ENSHCOG00000016704	scrt1b	96	64.401	Hippocampus_comes
ENSPREG00000001147	scrt2	100	84.375	ENSHCOG00000008116	scrt2	100	84.375	Hippocampus_comes
ENSPREG00000001147	scrt2	97	65.273	ENSIPUG00000004551	scrt1a	97	65.273	Ictalurus_punctatus
ENSPREG00000001147	scrt2	97	61.165	ENSIPUG00000005547	-	98	61.165	Ictalurus_punctatus
ENSPREG00000001147	scrt2	99	59.146	ENSKMAG00000009489	-	100	59.146	Kryptolebias_marmoratus
ENSPREG00000001147	scrt2	100	96.552	ENSKMAG00000018087	scrt2	100	96.552	Kryptolebias_marmoratus
ENSPREG00000001147	scrt2	97	65.049	ENSKMAG00000005484	scrt1b	96	65.049	Kryptolebias_marmoratus
ENSPREG00000001147	scrt2	100	95.312	ENSLBEG00000015419	scrt2	100	95.312	Labrus_bergylta
ENSPREG00000001147	scrt2	97	58.934	ENSLBEG00000023388	-	97	58.934	Labrus_bergylta
ENSPREG00000001147	scrt2	97	66.343	ENSLACG00000003588	SCRT1	96	66.343	Latimeria_chalumnae
ENSPREG00000001147	scrt2	100	65.337	ENSLOCG00000002246	scrt2	100	65.217	Lepisosteus_oculatus
ENSPREG00000001147	scrt2	97	67.638	ENSLOCG00000007573	scrt1b	97	67.638	Lepisosteus_oculatus
ENSPREG00000001147	scrt2	97	64.839	ENSMAMG00000011698	scrt1b	96	64.839	Mastacembelus_armatus
ENSPREG00000001147	scrt2	100	95.611	ENSMAMG00000001291	scrt2	100	95.611	Mastacembelus_armatus
ENSPREG00000001147	scrt2	97	64.516	ENSMZEG00005005627	scrt1b	96	64.516	Maylandia_zebra
ENSPREG00000001147	scrt2	97	59.875	ENSMZEG00005026702	-	97	59.875	Maylandia_zebra
ENSPREG00000001147	scrt2	100	96.552	ENSMZEG00005026445	scrt2	100	96.552	Maylandia_zebra
ENSPREG00000001147	scrt2	80	66.406	ENSMGAG00000016579	SCRT2	97	67.188	Meleagris_gallopavo
ENSPREG00000001147	scrt2	97	59.688	ENSMMOG00000018345	-	97	59.688	Mola_mola
ENSPREG00000001147	scrt2	97	64.725	ENSMMOG00000003327	scrt1b	96	63.754	Mola_mola
ENSPREG00000001147	scrt2	99	94.025	ENSMMOG00000009272	scrt2	99	94.340	Mola_mola
ENSPREG00000001147	scrt2	97	65.049	ENSMALG00000012704	scrt1b	96	65.049	Monopterus_albus
ENSPREG00000001147	scrt2	100	79.624	ENSMALG00000013656	scrt2	100	79.624	Monopterus_albus
ENSPREG00000001147	scrt2	97	59.875	ENSNBRG00000014882	-	97	59.875	Neolamprologus_brichardi
ENSPREG00000001147	scrt2	100	84.326	ENSNBRG00000007221	scrt2	100	84.326	Neolamprologus_brichardi
ENSPREG00000001147	scrt2	97	64.078	ENSNBRG00000013983	scrt1b	96	64.401	Neolamprologus_brichardi
ENSPREG00000001147	scrt2	100	62.121	ENSONIG00000003152	-	100	61.755	Oreochromis_niloticus
ENSPREG00000001147	scrt2	97	64.516	ENSONIG00000006007	scrt1b	100	64.309	Oreochromis_niloticus
ENSPREG00000001147	scrt2	97	60.000	ENSONIG00000019809	-	100	60.000	Oreochromis_niloticus
ENSPREG00000001147	scrt2	100	96.238	ENSONIG00000016758	scrt2	100	96.238	Oreochromis_niloticus
ENSPREG00000001147	scrt2	99	57.229	ENSORLG00000022825	-	100	57.229	Oryzias_latipes
ENSPREG00000001147	scrt2	97	64.839	ENSORLG00000025651	scrt1b	96	64.839	Oryzias_latipes
ENSPREG00000001147	scrt2	100	96.238	ENSORLG00000024051	scrt2	100	96.238	Oryzias_latipes
ENSPREG00000001147	scrt2	100	96.238	ENSORLG00020011478	scrt2	100	96.238	Oryzias_latipes_hni
ENSPREG00000001147	scrt2	97	64.839	ENSORLG00020012967	scrt1b	96	64.839	Oryzias_latipes_hni
ENSPREG00000001147	scrt2	100	96.238	ENSORLG00015005524	scrt2	100	96.238	Oryzias_latipes_hsok
ENSPREG00000001147	scrt2	97	64.839	ENSORLG00015019165	scrt1b	96	64.839	Oryzias_latipes_hsok
ENSPREG00000001147	scrt2	99	57.229	ENSORLG00015010104	-	100	57.229	Oryzias_latipes_hsok
ENSPREG00000001147	scrt2	97	64.839	ENSOMEG00000003925	scrt1b	96	64.839	Oryzias_melastigma
ENSPREG00000001147	scrt2	100	96.238	ENSOMEG00000002661	scrt2	100	96.238	Oryzias_melastigma
ENSPREG00000001147	scrt2	99	58.967	ENSOMEG00000000286	-	100	58.967	Oryzias_melastigma
ENSPREG00000001147	scrt2	97	66.019	ENSPKIG00000020085	scrt1a	97	66.019	Paramormyrops_kingsleyae
ENSPREG00000001147	scrt2	97	66.990	ENSPKIG00000022303	SCRT1	97	66.990	Paramormyrops_kingsleyae
ENSPREG00000001147	scrt2	100	78.125	ENSPMGG00000016561	scrt2	100	78.125	Periophthalmus_magnuspinnatus
ENSPREG00000001147	scrt2	97	59.621	ENSPMGG00000021402	-	97	59.621	Periophthalmus_magnuspinnatus
ENSPREG00000001147	scrt2	97	63.430	ENSPMGG00000002260	scrt1b	96	63.430	Periophthalmus_magnuspinnatus
ENSPREG00000001147	scrt2	99	58.841	ENSPFOG00000005616	-	100	58.841	Poecilia_formosa
ENSPREG00000001147	scrt2	100	99.687	ENSPFOG00000007738	scrt2	100	99.687	Poecilia_formosa
ENSPREG00000001147	scrt2	97	65.049	ENSPFOG00000017719	scrt1b	96	65.049	Poecilia_formosa
ENSPREG00000001147	scrt2	99	58.841	ENSPLAG00000011718	-	100	58.841	Poecilia_latipinna
ENSPREG00000001147	scrt2	100	89.028	ENSPLAG00000005765	scrt2	100	89.028	Poecilia_latipinna
ENSPREG00000001147	scrt2	97	65.049	ENSPLAG00000009876	scrt1b	96	65.049	Poecilia_latipinna
ENSPREG00000001147	scrt2	97	65.049	ENSPMEG00000013274	scrt1b	96	65.049	Poecilia_mexicana
ENSPREG00000001147	scrt2	100	89.028	ENSPMEG00000001538	scrt2	100	89.028	Poecilia_mexicana
ENSPREG00000001147	scrt2	99	58.841	ENSPMEG00000011706	-	100	58.841	Poecilia_mexicana
ENSPREG00000001147	scrt2	97	64.516	ENSPNYG00000017733	scrt1b	96	64.516	Pundamilia_nyererei
ENSPREG00000001147	scrt2	100	84.326	ENSPNYG00000013109	scrt2	100	84.326	Pundamilia_nyererei
ENSPREG00000001147	scrt2	97	59.875	ENSPNYG00000008865	-	97	59.875	Pundamilia_nyererei
ENSPREG00000001147	scrt2	97	66.343	ENSPNAG00000017415	scrt1a	97	66.343	Pygocentrus_nattereri
ENSPREG00000001147	scrt2	97	63.871	ENSPNAG00000027880	-	98	63.871	Pygocentrus_nattereri
ENSPREG00000001147	scrt2	97	65.372	ENSSFOG00015001195	SCRT1	97	65.372	Scleropages_formosus
ENSPREG00000001147	scrt2	97	64.078	ENSSMAG00000019207	scrt1b	96	64.078	Scophthalmus_maximus
ENSPREG00000001147	scrt2	97	58.824	ENSSMAG00000005122	-	97	58.824	Scophthalmus_maximus
ENSPREG00000001147	scrt2	97	65.161	ENSSDUG00000007752	scrt1b	96	65.161	Seriola_dumerili
ENSPREG00000001147	scrt2	97	90.584	ENSSDUG00000001637	scrt2	95	90.584	Seriola_dumerili
ENSPREG00000001147	scrt2	97	59.875	ENSSDUG00000013215	-	97	59.875	Seriola_dumerili
ENSPREG00000001147	scrt2	97	59.875	ENSSLDG00000016454	-	97	59.875	Seriola_lalandi_dorsalis
ENSPREG00000001147	scrt2	97	65.161	ENSSLDG00000017166	scrt1b	96	65.161	Seriola_lalandi_dorsalis
ENSPREG00000001147	scrt2	100	95.925	ENSSLDG00000013565	scrt2	100	95.925	Seriola_lalandi_dorsalis
ENSPREG00000001147	scrt2	97	62.581	ENSSPUG00000018637	SCRT2	97	62.581	Sphenodon_punctatus
ENSPREG00000001147	scrt2	97	65.161	ENSSPAG00000002200	scrt1b	96	65.161	Stegastes_partitus
ENSPREG00000001147	scrt2	97	59.875	ENSSPAG00000006788	-	97	59.875	Stegastes_partitus
ENSPREG00000001147	scrt2	100	84.953	ENSSPAG00000014018	scrt2	100	84.953	Stegastes_partitus
ENSPREG00000001147	scrt2	80	65.625	ENSTGUG00000006801	SCRT2	99	66.797	Taeniopygia_guttata
ENSPREG00000001147	scrt2	96	63.312	ENSTRUG00000011637	scrt1b	97	63.312	Takifugu_rubripes
ENSPREG00000001147	scrt2	99	88.679	ENSTRUG00000007620	scrt2	99	88.679	Takifugu_rubripes
ENSPREG00000001147	scrt2	97	60.188	ENSTRUG00000012719	-	97	60.502	Takifugu_rubripes
ENSPREG00000001147	scrt2	81	63.813	ENSTRUG00000019558	-	79	64.202	Takifugu_rubripes
ENSPREG00000001147	scrt2	96	63.312	ENSTNIG00000018384	scrt1b	96	63.312	Tetraodon_nigroviridis
ENSPREG00000001147	scrt2	99	93.396	ENSTNIG00000012473	scrt2	99	93.082	Tetraodon_nigroviridis
ENSPREG00000001147	scrt2	100	93.103	ENSXCOG00000014367	scrt2	100	93.103	Xiphophorus_couchianus
ENSPREG00000001147	scrt2	99	57.053	ENSXCOG00000019861	-	100	57.053	Xiphophorus_couchianus
ENSPREG00000001147	scrt2	97	65.049	ENSXCOG00000019675	scrt1b	96	65.049	Xiphophorus_couchianus
ENSPREG00000001147	scrt2	97	65.049	ENSXMAG00000027885	scrt1b	96	65.049	Xiphophorus_maculatus
ENSPREG00000001147	scrt2	99	58.537	ENSXMAG00000015353	-	100	58.537	Xiphophorus_maculatus
ENSPREG00000001147	scrt2	100	99.060	ENSXMAG00000028567	scrt2	100	99.060	Xiphophorus_maculatus