EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001332 (Gene tree)
Gene ID: 103474667
Gene Symbol: gfm1
Alias: fc96f12|wu:fc96f12|zgc:154041
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Plus strand
Length: 15099 bases
Position: chrLG13:18209613-18224711
Accession: 103474667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001847	GTP_EFTU	PF00009.27	5.7e-63	1	1
ENSPREP00000001847	GTP_EFTU_D2	PF03144.25	3.4e-17	1	1
ENSPREP00000001847	EFG_IV	PF03764.18	1.6e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001890	-	2367	XM_008425790	ENSPREP00000001847	788 (aa)	XP_008424012	UPI0007E9C207

Gene Model

Click here to download ENSPREG00000001332's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001332's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001332	gfm1	69	38.926	ENSPREG00000008298	-	72	38.926
ENSPREG00000001332	gfm1	93	32.855	ENSPREG00000021026	gfm2	99	32.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001332	gfm1	93	80.952	ENSG00000168827	GFM1	100	91.667	Homo_sapiens
ENSPREG00000001332	gfm1	89	88.968	ENSAPOG00000016489	gfm1	99	88.968	Acanthochromis_polyacanthus
ENSPREG00000001332	gfm1	91	82.869	ENSAMEG00000013542	GFM1	95	82.869	Ailuropoda_melanoleuca
ENSPREG00000001332	gfm1	92	86.759	ENSACIG00000014465	gfm1	94	86.759	Amphilophus_citrinellus
ENSPREG00000001332	gfm1	95	89.840	ENSAOCG00000006023	gfm1	100	89.840	Amphiprion_ocellaris
ENSPREG00000001332	gfm1	95	89.706	ENSAPEG00000024499	gfm1	100	89.706	Amphiprion_percula
ENSPREG00000001332	gfm1	95	90.374	ENSATEG00000013789	gfm1	100	90.374	Anabas_testudineus
ENSPREG00000001332	gfm1	92	80.000	ENSAPLG00000005022	GFM1	100	80.000	Anas_platyrhynchos
ENSPREG00000001332	gfm1	92	80.828	ENSACAG00000006829	GFM1	98	80.828	Anolis_carolinensis
ENSPREG00000001332	gfm1	95	79.228	ENSANAG00000035983	GFM1	100	79.228	Aotus_nancymaae
ENSPREG00000001332	gfm1	95	91.176	ENSACLG00000016586	gfm1	100	91.176	Astatotilapia_calliptera
ENSPREG00000001332	gfm1	95	86.248	ENSAMXG00000013435	gfm1	98	87.415	Astyanax_mexicanus
ENSPREG00000001332	gfm1	91	82.033	ENSBTAG00000027795	GFM1	95	82.033	Bos_taurus
ENSPREG00000001332	gfm1	89	57.632	WBGene00009246	gfm-1	95	57.303	Caenorhabditis_elegans
ENSPREG00000001332	gfm1	92	81.818	ENSCJAG00000000363	GFM1	97	81.818	Callithrix_jacchus
ENSPREG00000001332	gfm1	93	81.335	ENSCAFG00000009006	GFM1	100	82.249	Canis_familiaris
ENSPREG00000001332	gfm1	93	81.224	ENSCAFG00020005878	GFM1	98	82.730	Canis_lupus_dingo
ENSPREG00000001332	gfm1	91	82.312	ENSCHIG00000015220	GFM1	95	82.312	Capra_hircus
ENSPREG00000001332	gfm1	95	79.681	ENSTSYG00000002013	GFM1	100	79.681	Carlito_syrichta
ENSPREG00000001332	gfm1	91	72.376	ENSCAPG00000005699	GFM1	97	72.376	Cavia_aperea
ENSPREG00000001332	gfm1	95	79.973	ENSCPOG00000001194	GFM1	100	79.973	Cavia_porcellus
ENSPREG00000001332	gfm1	92	81.267	ENSCCAG00000025561	GFM1	97	81.267	Cebus_capucinus
ENSPREG00000001332	gfm1	95	79.760	ENSCATG00000037622	GFM1	100	79.760	Cercocebus_atys
ENSPREG00000001332	gfm1	92	81.543	ENSCLAG00000002503	GFM1	96	81.543	Chinchilla_lanigera
ENSPREG00000001332	gfm1	95	79.893	ENSCSAG00000012162	GFM1	100	79.893	Chlorocebus_sabaeus
ENSPREG00000001332	gfm1	95	71.485	ENSCHOG00000004867	GFM1	100	71.485	Choloepus_hoffmanni
ENSPREG00000001332	gfm1	95	80.374	ENSCPBG00000018367	GFM1	99	80.374	Chrysemys_picta_bellii
ENSPREG00000001332	gfm1	89	58.601	ENSCING00000011960	-	93	58.601	Ciona_intestinalis
ENSPREG00000001332	gfm1	91	59.167	ENSCSAVG00000008514	-	99	59.167	Ciona_savignyi
ENSPREG00000001332	gfm1	93	80.816	ENSCANG00000031714	GFM1	100	79.627	Colobus_angolensis_palliatus
ENSPREG00000001332	gfm1	95	79.627	ENSCGRG00001022095	GFM1	100	79.627	Cricetulus_griseus_chok1gshd
ENSPREG00000001332	gfm1	95	79.627	ENSCGRG00000012043	GFM1	100	79.627	Cricetulus_griseus_crigri
ENSPREG00000001332	gfm1	92	84.094	ENSCSEG00000017088	gfm1	99	84.094	Cynoglossus_semilaevis
ENSPREG00000001332	gfm1	95	94.652	ENSCVAG00000004126	gfm1	100	94.652	Cyprinodon_variegatus
ENSPREG00000001332	gfm1	95	83.957	ENSDARG00000063624	gfm1	100	83.957	Danio_rerio
ENSPREG00000001332	gfm1	52	80.440	ENSDNOG00000016385	-	100	80.440	Dasypus_novemcinctus
ENSPREG00000001332	gfm1	95	78.353	ENSDORG00000014165	Gfm1	100	78.353	Dipodomys_ordii
ENSPREG00000001332	gfm1	90	68.688	FBgn0263133	mEFG1	95	68.688	Drosophila_melanogaster
ENSPREG00000001332	gfm1	91	74.064	ENSETEG00000019197	GFM1	95	74.064	Echinops_telfairi
ENSPREG00000001332	gfm1	86	62.908	ENSEBUG00000012794	gfm1	99	62.908	Eptatretus_burgeri
ENSPREG00000001332	gfm1	91	60.694	ENSEEUG00000000429	GFM1	99	60.694	Erinaceus_europaeus
ENSPREG00000001332	gfm1	95	85.829	ENSELUG00000014728	gfm1	100	85.829	Esox_lucius
ENSPREG00000001332	gfm1	92	81.818	ENSFCAG00000013291	GFM1	100	79.973	Felis_catus
ENSPREG00000001332	gfm1	86	79.852	ENSFALG00000007619	GFM1	100	79.852	Ficedula_albicollis
ENSPREG00000001332	gfm1	95	79.045	ENSFDAG00000016559	GFM1	100	79.045	Fukomys_damarensis
ENSPREG00000001332	gfm1	95	94.920	ENSFHEG00000006091	gfm1	100	94.920	Fundulus_heteroclitus
ENSPREG00000001332	gfm1	92	87.895	ENSGMOG00000010161	gfm1	100	87.895	Gadus_morhua
ENSPREG00000001332	gfm1	92	80.276	ENSGALG00000009634	GFM1	98	80.276	Gallus_gallus
ENSPREG00000001332	gfm1	95	96.925	ENSGAFG00000012527	gfm1	100	96.925	Gambusia_affinis
ENSPREG00000001332	gfm1	95	90.508	ENSGACG00000009864	gfm1	99	90.508	Gasterosteus_aculeatus
ENSPREG00000001332	gfm1	93	80.952	ENSGGOG00000003085	GFM1	100	79.760	Gorilla_gorilla
ENSPREG00000001332	gfm1	95	91.310	ENSHBUG00000002120	gfm1	100	91.310	Haplochromis_burtoni
ENSPREG00000001332	gfm1	92	80.579	ENSHGLG00000016855	GFM1	96	80.579	Heterocephalus_glaber_female
ENSPREG00000001332	gfm1	92	80.579	ENSHGLG00100013049	GFM1	96	80.579	Heterocephalus_glaber_male
ENSPREG00000001332	gfm1	95	89.171	ENSHCOG00000007638	gfm1	100	89.171	Hippocampus_comes
ENSPREG00000001332	gfm1	95	86.364	ENSIPUG00000005873	gfm1	100	86.364	Ictalurus_punctatus
ENSPREG00000001332	gfm1	92	79.614	ENSSTOG00000010150	GFM1	98	79.614	Ictidomys_tridecemlineatus
ENSPREG00000001332	gfm1	95	79.228	ENSJJAG00000016447	Gfm1	100	79.228	Jaculus_jaculus
ENSPREG00000001332	gfm1	95	88.636	ENSKMAG00000020768	gfm1	100	88.636	Kryptolebias_marmoratus
ENSPREG00000001332	gfm1	89	91.298	ENSLBEG00000021315	gfm1	100	91.298	Labrus_bergylta
ENSPREG00000001332	gfm1	95	81.818	ENSLACG00000012295	GFM1	100	81.818	Latimeria_chalumnae
ENSPREG00000001332	gfm1	92	79.754	ENSLOCG00000003778	gfm1	100	79.754	Lepisosteus_oculatus
ENSPREG00000001332	gfm1	95	78.267	ENSLAFG00000010945	GFM1	99	79.028	Loxodonta_africana
ENSPREG00000001332	gfm1	95	79.627	ENSMFAG00000035731	GFM1	100	79.627	Macaca_fascicularis
ENSPREG00000001332	gfm1	95	79.627	ENSMMUG00000004961	GFM1	100	79.627	Macaca_mulatta
ENSPREG00000001332	gfm1	95	79.494	ENSMNEG00000033245	GFM1	100	79.494	Macaca_nemestrina
ENSPREG00000001332	gfm1	92	79.724	ENSMLEG00000030908	GFM1	99	79.595	Mandrillus_leucophaeus
ENSPREG00000001332	gfm1	95	89.840	ENSMAMG00000011760	gfm1	100	89.840	Mastacembelus_armatus
ENSPREG00000001332	gfm1	95	91.310	ENSMZEG00005016639	gfm1	100	91.310	Maylandia_zebra
ENSPREG00000001332	gfm1	92	79.972	ENSMGAG00000010641	GFM1	97	79.972	Meleagris_gallopavo
ENSPREG00000001332	gfm1	95	79.760	ENSMAUG00000000611	Gfm1	100	79.760	Mesocricetus_auratus
ENSPREG00000001332	gfm1	92	82.369	ENSMICG00000049086	GFM1	96	82.369	Microcebus_murinus
ENSPREG00000001332	gfm1	95	80.027	ENSMOCG00000000465	Gfm1	100	80.027	Microtus_ochrogaster
ENSPREG00000001332	gfm1	92	90.358	ENSMMOG00000012538	gfm1	98	90.358	Mola_mola
ENSPREG00000001332	gfm1	94	78.408	ENSMODG00000015673	GFM1	99	78.408	Monodelphis_domestica
ENSPREG00000001332	gfm1	96	84.941	ENSMALG00000012508	gfm1	99	84.941	Monopterus_albus
ENSPREG00000001332	gfm1	95	80.027	MGP_CAROLIEiJ_G0025052	Gfm1	100	80.027	Mus_caroli
ENSPREG00000001332	gfm1	95	79.760	ENSMUSG00000027774	Gfm1	100	79.760	Mus_musculus
ENSPREG00000001332	gfm1	95	79.361	MGP_PahariEiJ_G0026495	Gfm1	100	79.401	Mus_pahari
ENSPREG00000001332	gfm1	95	79.760	MGP_SPRETEiJ_G0025994	Gfm1	100	79.760	Mus_spretus
ENSPREG00000001332	gfm1	92	82.231	ENSMPUG00000002859	GFM1	96	82.231	Mustela_putorius_furo
ENSPREG00000001332	gfm1	92	81.956	ENSMLUG00000000452	GFM1	96	81.956	Myotis_lucifugus
ENSPREG00000001332	gfm1	95	79.333	ENSNGAG00000012375	Gfm1	100	79.333	Nannospalax_galili
ENSPREG00000001332	gfm1	92	91.621	ENSNBRG00000004631	gfm1	99	91.621	Neolamprologus_brichardi
ENSPREG00000001332	gfm1	92	81.543	ENSNLEG00000004176	GFM1	100	79.760	Nomascus_leucogenys
ENSPREG00000001332	gfm1	86	72.059	ENSMEUG00000007784	GFM1	99	72.059	Notamacropus_eugenii
ENSPREG00000001332	gfm1	95	79.706	ENSOPRG00000009860	GFM1	100	79.706	Ochotona_princeps
ENSPREG00000001332	gfm1	93	81.471	ENSODEG00000004316	GFM1	100	79.841	Octodon_degus
ENSPREG00000001332	gfm1	95	91.711	ENSONIG00000003772	gfm1	100	91.711	Oreochromis_niloticus
ENSPREG00000001332	gfm1	93	81.744	ENSOCUG00000013561	GFM1	100	80.637	Oryctolagus_cuniculus
ENSPREG00000001332	gfm1	90	91.667	ENSORLG00000006487	gfm1	100	91.667	Oryzias_latipes
ENSPREG00000001332	gfm1	95	91.310	ENSORLG00020003362	gfm1	100	91.310	Oryzias_latipes_hni
ENSPREG00000001332	gfm1	95	90.775	ENSORLG00015005829	gfm1	100	90.775	Oryzias_latipes_hsok
ENSPREG00000001332	gfm1	95	91.578	ENSOMEG00000012894	gfm1	100	91.578	Oryzias_melastigma
ENSPREG00000001332	gfm1	92	81.543	ENSOGAG00000008298	GFM1	96	81.543	Otolemur_garnettii
ENSPREG00000001332	gfm1	91	81.553	ENSOARG00000002409	GFM1	99	81.553	Ovis_aries
ENSPREG00000001332	gfm1	93	80.952	ENSPPAG00000033881	GFM1	100	79.760	Pan_paniscus
ENSPREG00000001332	gfm1	92	81.818	ENSPPRG00000009281	GFM1	100	79.973	Panthera_pardus
ENSPREG00000001332	gfm1	92	81.680	ENSPTIG00000012416	GFM1	100	79.841	Panthera_tigris_altaica
ENSPREG00000001332	gfm1	93	80.952	ENSPTRG00000015570	GFM1	100	79.760	Pan_troglodytes
ENSPREG00000001332	gfm1	95	79.627	ENSPANG00000016512	GFM1	100	79.627	Papio_anubis
ENSPREG00000001332	gfm1	95	84.091	ENSPKIG00000004876	gfm1	100	84.091	Paramormyrops_kingsleyae
ENSPREG00000001332	gfm1	95	80.374	ENSPSIG00000012567	GFM1	99	80.374	Pelodiscus_sinensis
ENSPREG00000001332	gfm1	92	87.034	ENSPMGG00000014068	gfm1	100	87.034	Periophthalmus_magnuspinnatus
ENSPREG00000001332	gfm1	95	79.760	ENSPEMG00000008942	Gfm1	100	79.760	Peromyscus_maniculatus_bairdii
ENSPREG00000001332	gfm1	82	77.519	ENSPCIG00000020195	GFM1	95	80.492	Phascolarctos_cinereus
ENSPREG00000001332	gfm1	95	98.663	ENSPFOG00000011022	gfm1	100	98.663	Poecilia_formosa
ENSPREG00000001332	gfm1	94	97.297	ENSPLAG00000019585	gfm1	100	98.034	Poecilia_latipinna
ENSPREG00000001332	gfm1	95	98.529	ENSPMEG00000012376	gfm1	100	98.529	Poecilia_mexicana
ENSPREG00000001332	gfm1	93	80.680	ENSPPYG00000014244	GFM1	100	79.494	Pongo_abelii
ENSPREG00000001332	gfm1	89	79.659	ENSPCAG00000008934	GFM1	100	79.659	Procavia_capensis
ENSPREG00000001332	gfm1	93	81.199	ENSPCOG00000022259	GFM1	100	79.973	Propithecus_coquereli
ENSPREG00000001332	gfm1	92	81.405	ENSPVAG00000013605	GFM1	96	81.405	Pteropus_vampyrus
ENSPREG00000001332	gfm1	95	91.043	ENSPNYG00000006037	gfm1	100	91.043	Pundamilia_nyererei
ENSPREG00000001332	gfm1	95	86.230	ENSPNAG00000001237	gfm1	100	86.230	Pygocentrus_nattereri
ENSPREG00000001332	gfm1	92	81.241	ENSRNOG00000012873	Gfm1	97	81.241	Rattus_norvegicus
ENSPREG00000001332	gfm1	93	80.816	ENSRBIG00000031363	GFM1	100	79.627	Rhinopithecus_bieti
ENSPREG00000001332	gfm1	93	80.952	ENSRROG00000031081	GFM1	100	79.760	Rhinopithecus_roxellana
ENSPREG00000001332	gfm1	88	56.484	YLR069C	-	90	56.484	Saccharomyces_cerevisiae
ENSPREG00000001332	gfm1	95	79.494	ENSSBOG00000023252	GFM1	100	79.494	Saimiri_boliviensis_boliviensis
ENSPREG00000001332	gfm1	92	80.913	ENSSHAG00000017772	GFM1	97	80.690	Sarcophilus_harrisii
ENSPREG00000001332	gfm1	95	84.246	ENSSFOG00015003117	gfm1	100	84.246	Scleropages_formosus
ENSPREG00000001332	gfm1	95	89.171	ENSSMAG00000013221	gfm1	100	89.171	Scophthalmus_maximus
ENSPREG00000001332	gfm1	95	90.775	ENSSDUG00000018665	gfm1	100	90.775	Seriola_dumerili
ENSPREG00000001332	gfm1	95	90.642	ENSSLDG00000020606	gfm1	100	90.642	Seriola_lalandi_dorsalis
ENSPREG00000001332	gfm1	94	77.402	ENSSPUG00000018686	GFM1	100	77.402	Sphenodon_punctatus
ENSPREG00000001332	gfm1	95	92.781	ENSSPAG00000008800	gfm1	100	92.781	Stegastes_partitus
ENSPREG00000001332	gfm1	91	82.033	ENSSSCG00000025651	GFM1	95	82.033	Sus_scrofa
ENSPREG00000001332	gfm1	95	88.369	ENSTRUG00000009244	gfm1	100	88.369	Takifugu_rubripes
ENSPREG00000001332	gfm1	95	90.374	ENSTNIG00000007729	gfm1	100	90.374	Tetraodon_nigroviridis
ENSPREG00000001332	gfm1	85	73.333	ENSTBEG00000017404	GFM1	89	73.333	Tupaia_belangeri
ENSPREG00000001332	gfm1	91	82.173	ENSTTRG00000001735	GFM1	95	82.173	Tursiops_truncatus
ENSPREG00000001332	gfm1	92	82.094	ENSUAMG00000026381	GFM1	100	80.106	Ursus_americanus
ENSPREG00000001332	gfm1	92	82.094	ENSUMAG00000011268	GFM1	96	82.094	Ursus_maritimus
ENSPREG00000001332	gfm1	92	78.207	ENSVPAG00000009444	GFM1	96	78.207	Vicugna_pacos
ENSPREG00000001332	gfm1	93	81.148	ENSVVUG00000020091	GFM1	100	81.953	Vulpes_vulpes
ENSPREG00000001332	gfm1	95	80.452	ENSXETG00000032551	GFM1	100	80.452	Xenopus_tropicalis
ENSPREG00000001332	gfm1	51	92.556	ENSXCOG00000012590	gfm1	93	92.556	Xiphophorus_couchianus
ENSPREG00000001332	gfm1	95	97.460	ENSXMAG00000000261	gfm1	100	97.460	Xiphophorus_maculatus