EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPREG00000001365 (Gene tree)
Gene ID: 103463164
Gene Symbol: rtca
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 12200 bases
Position: chrLG4:4212789-4224988
Accession: 103463164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001829	RTC	PF01137.21	1.3e-86	1	1
ENSPREP00000001829	RTC_insert	PF05189.13	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001873	-	5398	XM_008406370	ENSPREP00000001829	366 (aa)	XP_008404592	UPI0004A49191

Gene Model

Click here to download ENSPREG00000001365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001365	rtca	99	72.404	ENSG00000137996	RTCA	100	72.404	Homo_sapiens
ENSPREG00000001365	rtca	100	90.437	ENSAPOG00000001345	rtca	100	90.437	Acanthochromis_polyacanthus
ENSPREG00000001365	rtca	73	75.093	ENSAMEG00000008855	RTCA	100	75.093	Ailuropoda_melanoleuca
ENSPREG00000001365	rtca	99	90.659	ENSACIG00000019643	rtca	100	90.659	Amphilophus_citrinellus
ENSPREG00000001365	rtca	100	90.984	ENSAOCG00000014979	rtca	100	90.984	Amphiprion_ocellaris
ENSPREG00000001365	rtca	100	90.984	ENSAPEG00000006945	rtca	100	90.984	Amphiprion_percula
ENSPREG00000001365	rtca	95	91.691	ENSATEG00000006315	rtca	96	91.691	Anabas_testudineus
ENSPREG00000001365	rtca	95	68.555	ENSAPLG00000015430	RTCA	100	68.555	Anas_platyrhynchos
ENSPREG00000001365	rtca	99	72.404	ENSANAG00000025446	RTCA	100	72.404	Aotus_nancymaae
ENSPREG00000001365	rtca	100	90.984	ENSACLG00000020770	rtca	100	90.984	Astatotilapia_calliptera
ENSPREG00000001365	rtca	99	77.473	ENSAMXG00000043271	rtca	100	77.473	Astyanax_mexicanus
ENSPREG00000001365	rtca	99	73.497	ENSBTAG00000006321	RTCA	100	73.497	Bos_taurus
ENSPREG00000001365	rtca	99	72.678	ENSCJAG00000003398	RTCA	100	72.678	Callithrix_jacchus
ENSPREG00000001365	rtca	99	72.404	ENSCAFG00000020010	RTCA	68	72.404	Canis_familiaris
ENSPREG00000001365	rtca	99	72.404	ENSCAFG00020011528	RTCA	57	72.404	Canis_lupus_dingo
ENSPREG00000001365	rtca	99	73.224	ENSCHIG00000018937	RTCA	100	73.224	Capra_hircus
ENSPREG00000001365	rtca	99	72.951	ENSTSYG00000011305	RTCA	100	72.951	Carlito_syrichta
ENSPREG00000001365	rtca	99	72.131	ENSCCAG00000021844	RTCA	100	72.131	Cebus_capucinus
ENSPREG00000001365	rtca	99	70.712	ENSCATG00000019364	RTCA	100	73.786	Cercocebus_atys
ENSPREG00000001365	rtca	86	74.684	ENSCLAG00000006125	RTCA	100	74.684	Chinchilla_lanigera
ENSPREG00000001365	rtca	99	72.951	ENSCSAG00000001509	RTCA	100	72.951	Chlorocebus_sabaeus
ENSPREG00000001365	rtca	98	72.576	ENSCHOG00000005211	RTCA	99	72.576	Choloepus_hoffmanni
ENSPREG00000001365	rtca	99	69.315	ENSCPBG00000026658	RTCA	100	69.315	Chrysemys_picta_bellii
ENSPREG00000001365	rtca	98	57.382	ENSCING00000007875	-	98	57.382	Ciona_intestinalis
ENSPREG00000001365	rtca	98	57.382	ENSCSAVG00000007269	-	98	57.382	Ciona_savignyi
ENSPREG00000001365	rtca	99	72.678	ENSCANG00000040106	RTCA	100	72.678	Colobus_angolensis_palliatus
ENSPREG00000001365	rtca	73	73.234	ENSCGRG00001013163	Rtca	85	73.234	Cricetulus_griseus_chok1gshd
ENSPREG00000001365	rtca	98	85.475	ENSCSEG00000000530	rtca	96	85.475	Cynoglossus_semilaevis
ENSPREG00000001365	rtca	99	74.590	ENSCVAG00000021809	rtca	100	74.590	Cyprinodon_variegatus
ENSPREG00000001365	rtca	99	77.473	ENSDARG00000002215	rtca	100	77.473	Danio_rerio
ENSPREG00000001365	rtca	99	73.224	ENSDNOG00000000456	RTCA	100	73.224	Dasypus_novemcinctus
ENSPREG00000001365	rtca	99	72.678	ENSDORG00000005448	Rtca	100	72.678	Dipodomys_ordii
ENSPREG00000001365	rtca	97	39.496	FBgn0025630	Rtca	98	39.496	Drosophila_melanogaster
ENSPREG00000001365	rtca	93	52.924	ENSEBUG00000008556	rtca	94	52.924	Eptatretus_burgeri
ENSPREG00000001365	rtca	99	72.951	ENSEASG00005015926	RTCA	100	72.951	Equus_asinus_asinus
ENSPREG00000001365	rtca	99	72.951	ENSECAG00000019831	RTCA	100	72.951	Equus_caballus
ENSPREG00000001365	rtca	91	65.318	ENSEEUG00000001165	RTCA	100	65.318	Erinaceus_europaeus
ENSPREG00000001365	rtca	99	76.796	ENSELUG00000003741	rtca	99	76.796	Esox_lucius
ENSPREG00000001365	rtca	99	72.951	ENSFCAG00000024460	RTCA	100	72.951	Felis_catus
ENSPREG00000001365	rtca	91	69.670	ENSFALG00000002443	RTCA	90	69.670	Ficedula_albicollis
ENSPREG00000001365	rtca	98	58.564	ENSFDAG00000016084	-	100	58.564	Fukomys_damarensis
ENSPREG00000001365	rtca	99	72.131	ENSFDAG00000012070	-	100	72.131	Fukomys_damarensis
ENSPREG00000001365	rtca	70	76.265	ENSFHEG00000002868	rtca	92	85.116	Fundulus_heteroclitus
ENSPREG00000001365	rtca	99	79.121	ENSGMOG00000013264	rtca	100	79.121	Gadus_morhua
ENSPREG00000001365	rtca	99	69.315	ENSGALG00000005277	RTCA	100	69.315	Gallus_gallus
ENSPREG00000001365	rtca	100	97.814	ENSGAFG00000011853	rtca	100	97.814	Gambusia_affinis
ENSPREG00000001365	rtca	99	87.363	ENSGACG00000013497	rtca	100	87.363	Gasterosteus_aculeatus
ENSPREG00000001365	rtca	80	68.601	ENSGAGG00000023306	RTCA	100	68.601	Gopherus_agassizii
ENSPREG00000001365	rtca	99	71.858	ENSGGOG00000044018	-	100	71.858	Gorilla_gorilla
ENSPREG00000001365	rtca	99	72.404	ENSGGOG00000009546	-	100	72.816	Gorilla_gorilla
ENSPREG00000001365	rtca	100	90.710	ENSHBUG00000002114	rtca	100	90.710	Haplochromis_burtoni
ENSPREG00000001365	rtca	99	72.678	ENSHGLG00000002617	RTCA	100	72.678	Heterocephalus_glaber_female
ENSPREG00000001365	rtca	99	72.678	ENSHGLG00100006056	RTCA	100	72.678	Heterocephalus_glaber_male
ENSPREG00000001365	rtca	99	76.438	ENSHCOG00000020628	rtca	90	76.438	Hippocampus_comes
ENSPREG00000001365	rtca	99	76.923	ENSIPUG00000024803	rtca	100	76.923	Ictalurus_punctatus
ENSPREG00000001365	rtca	99	64.481	ENSSTOG00000033099	-	100	64.481	Ictidomys_tridecemlineatus
ENSPREG00000001365	rtca	99	67.760	ENSSTOG00000013528	-	100	67.760	Ictidomys_tridecemlineatus
ENSPREG00000001365	rtca	99	53.151	ENSJJAG00000016178	Rtca	100	53.151	Jaculus_jaculus
ENSPREG00000001365	rtca	100	91.257	ENSKMAG00000006651	rtca	100	91.257	Kryptolebias_marmoratus
ENSPREG00000001365	rtca	87	84.953	ENSLBEG00000002448	-	99	84.953	Labrus_bergylta
ENSPREG00000001365	rtca	99	86.427	ENSLBEG00000028971	rtca	99	86.427	Labrus_bergylta
ENSPREG00000001365	rtca	99	68.493	ENSLACG00000013666	RTCA	100	68.493	Latimeria_chalumnae
ENSPREG00000001365	rtca	99	74.247	ENSLOCG00000000093	rtca	99	74.247	Lepisosteus_oculatus
ENSPREG00000001365	rtca	99	72.131	ENSLAFG00000001473	RTCA	100	72.131	Loxodonta_africana
ENSPREG00000001365	rtca	99	72.951	ENSMFAG00000034132	RTCA	100	72.951	Macaca_fascicularis
ENSPREG00000001365	rtca	99	72.951	ENSMMUG00000019105	RTCA	100	72.951	Macaca_mulatta
ENSPREG00000001365	rtca	84	73.463	ENSMNEG00000037163	RTCA	100	73.463	Macaca_nemestrina
ENSPREG00000001365	rtca	99	60.383	ENSMLEG00000042151	RTCA	100	60.383	Mandrillus_leucophaeus
ENSPREG00000001365	rtca	99	92.033	ENSMAMG00000016536	rtca	100	92.033	Mastacembelus_armatus
ENSPREG00000001365	rtca	100	90.984	ENSMZEG00005017945	rtca	100	90.984	Maylandia_zebra
ENSPREG00000001365	rtca	87	69.497	ENSMGAG00000006892	RTCA	99	69.497	Meleagris_gallopavo
ENSPREG00000001365	rtca	99	72.404	ENSMAUG00000008488	Rtca	100	72.404	Mesocricetus_auratus
ENSPREG00000001365	rtca	84	74.110	ENSMICG00000008643	RTCA	100	74.110	Microcebus_murinus
ENSPREG00000001365	rtca	99	71.311	ENSMOCG00000016660	Rtca	100	71.311	Microtus_ochrogaster
ENSPREG00000001365	rtca	84	88.599	ENSMMOG00000007750	rtca	100	88.599	Mola_mola
ENSPREG00000001365	rtca	99	72.951	ENSMODG00000003557	RTCA	100	72.951	Monodelphis_domestica
ENSPREG00000001365	rtca	99	91.484	ENSMALG00000020844	rtca	100	91.484	Monopterus_albus
ENSPREG00000001365	rtca	99	71.038	MGP_CAROLIEiJ_G0025565	Rtca	100	71.038	Mus_caroli
ENSPREG00000001365	rtca	99	70.765	ENSMUSG00000000339	Rtca	100	70.765	Mus_musculus
ENSPREG00000001365	rtca	99	71.038	MGP_PahariEiJ_G0027011	Rtca	100	71.038	Mus_pahari
ENSPREG00000001365	rtca	99	71.038	MGP_SPRETEiJ_G0026515	Rtca	100	71.038	Mus_spretus
ENSPREG00000001365	rtca	99	72.951	ENSMPUG00000012119	RTCA	100	72.951	Mustela_putorius_furo
ENSPREG00000001365	rtca	99	68.665	ENSMLUG00000009922	RTCA	100	68.665	Myotis_lucifugus
ENSPREG00000001365	rtca	99	71.858	ENSNGAG00000011540	Rtca	99	71.858	Nannospalax_galili
ENSPREG00000001365	rtca	100	91.257	ENSNBRG00000003062	rtca	100	91.257	Neolamprologus_brichardi
ENSPREG00000001365	rtca	99	72.678	ENSNLEG00000031426	RTCA	100	72.678	Nomascus_leucogenys
ENSPREG00000001365	rtca	73	71.004	ENSOPRG00000012092	RTCA	71	71.004	Ochotona_princeps
ENSPREG00000001365	rtca	95	73.276	ENSODEG00000006990	RTCA	96	73.504	Octodon_degus
ENSPREG00000001365	rtca	100	91.530	ENSONIG00000007753	rtca	100	91.530	Oreochromis_niloticus
ENSPREG00000001365	rtca	86	72.871	ENSOANG00000012055	RTCA	98	72.871	Ornithorhynchus_anatinus
ENSPREG00000001365	rtca	99	72.951	ENSOCUG00000014247	RTCA	100	72.951	Oryctolagus_cuniculus
ENSPREG00000001365	rtca	99	89.835	ENSORLG00000013605	rtca	100	89.835	Oryzias_latipes
ENSPREG00000001365	rtca	99	90.110	ENSORLG00020001904	rtca	100	90.110	Oryzias_latipes_hni
ENSPREG00000001365	rtca	99	89.835	ENSORLG00015021064	rtca	100	89.835	Oryzias_latipes_hsok
ENSPREG00000001365	rtca	99	90.385	ENSOMEG00000000756	rtca	100	90.385	Oryzias_melastigma
ENSPREG00000001365	rtca	99	67.760	ENSOGAG00000005627	RTCA	100	67.760	Otolemur_garnettii
ENSPREG00000001365	rtca	86	73.899	ENSOARG00000018122	RTCA	100	73.899	Ovis_aries
ENSPREG00000001365	rtca	99	69.657	ENSPPAG00000035119	RTCA	100	72.492	Pan_paniscus
ENSPREG00000001365	rtca	99	72.951	ENSPPRG00000000350	RTCA	100	72.951	Panthera_pardus
ENSPREG00000001365	rtca	99	72.678	ENSPTIG00000012816	RTCA	100	72.678	Panthera_tigris_altaica
ENSPREG00000001365	rtca	99	69.657	ENSPTRG00000001004	RTCA	100	72.492	Pan_troglodytes
ENSPREG00000001365	rtca	99	72.951	ENSPANG00000000346	RTCA	100	72.951	Papio_anubis
ENSPREG00000001365	rtca	99	79.396	ENSPKIG00000001653	rtca	100	79.396	Paramormyrops_kingsleyae
ENSPREG00000001365	rtca	99	69.041	ENSPSIG00000011408	RTCA	100	69.041	Pelodiscus_sinensis
ENSPREG00000001365	rtca	99	71.585	ENSPEMG00000018582	Rtca	100	71.585	Peromyscus_maniculatus_bairdii
ENSPREG00000001365	rtca	98	55.402	ENSPMAG00000009110	rtca	98	55.402	Petromyzon_marinus
ENSPREG00000001365	rtca	99	72.678	ENSPCIG00000007684	RTCA	100	72.678	Phascolarctos_cinereus
ENSPREG00000001365	rtca	99	98.356	ENSPFOG00000004824	rtca	100	98.356	Poecilia_formosa
ENSPREG00000001365	rtca	100	98.361	ENSPLAG00000011753	rtca	100	98.361	Poecilia_latipinna
ENSPREG00000001365	rtca	100	98.361	ENSPMEG00000020469	rtca	100	98.361	Poecilia_mexicana
ENSPREG00000001365	rtca	99	72.951	ENSPPYG00000001115	RTCA	100	72.951	Pongo_abelii
ENSPREG00000001365	rtca	99	69.945	ENSPCAG00000005076	RTCA	100	69.945	Procavia_capensis
ENSPREG00000001365	rtca	99	73.224	ENSPCOG00000005603	RTCA	100	73.224	Propithecus_coquereli
ENSPREG00000001365	rtca	99	68.602	ENSPVAG00000009478	RTCA	100	68.602	Pteropus_vampyrus
ENSPREG00000001365	rtca	100	90.984	ENSPNYG00000004722	rtca	100	90.984	Pundamilia_nyererei
ENSPREG00000001365	rtca	99	77.198	ENSPNAG00000022270	rtca	100	77.198	Pygocentrus_nattereri
ENSPREG00000001365	rtca	99	71.038	ENSRNOG00000014575	Rtca	100	71.038	Rattus_norvegicus
ENSPREG00000001365	rtca	99	69.921	ENSRBIG00000041180	RTCA	100	72.816	Rhinopithecus_bieti
ENSPREG00000001365	rtca	99	72.404	ENSRROG00000024929	RTCA	100	72.404	Rhinopithecus_roxellana
ENSPREG00000001365	rtca	99	71.858	ENSSBOG00000028626	RTCA	100	71.858	Saimiri_boliviensis_boliviensis
ENSPREG00000001365	rtca	99	72.678	ENSSHAG00000001758	RTCA	100	72.678	Sarcophilus_harrisii
ENSPREG00000001365	rtca	99	85.319	ENSSMAG00000014680	rtca	98	85.319	Scophthalmus_maximus
ENSPREG00000001365	rtca	98	91.341	ENSSDUG00000015585	rtca	98	90.884	Seriola_dumerili
ENSPREG00000001365	rtca	95	91.404	ENSSLDG00000018985	rtca	95	91.404	Seriola_lalandi_dorsalis
ENSPREG00000001365	rtca	86	68.770	ENSSARG00000013993	RTCA	100	68.770	Sorex_araneus
ENSPREG00000001365	rtca	100	91.530	ENSSPAG00000011938	rtca	100	91.530	Stegastes_partitus
ENSPREG00000001365	rtca	99	73.224	ENSSSCG00000006865	RTCA	100	73.224	Sus_scrofa
ENSPREG00000001365	rtca	99	70.137	ENSTGUG00000005154	RTCA	100	70.137	Taeniopygia_guttata
ENSPREG00000001365	rtca	99	88.736	ENSTRUG00000008799	rtca	100	88.736	Takifugu_rubripes
ENSPREG00000001365	rtca	99	86.538	ENSTNIG00000004725	rtca	100	86.538	Tetraodon_nigroviridis
ENSPREG00000001365	rtca	57	57.143	ENSTBEG00000000943	RTCA	59	57.143	Tupaia_belangeri
ENSPREG00000001365	rtca	99	70.712	ENSTTRG00000015327	RTCA	100	70.712	Tursiops_truncatus
ENSPREG00000001365	rtca	95	70.893	ENSUAMG00000017265	RTCA	97	70.893	Ursus_americanus
ENSPREG00000001365	rtca	99	72.404	ENSUMAG00000007881	RTCA	100	72.404	Ursus_maritimus
ENSPREG00000001365	rtca	86	65.300	ENSVPAG00000001039	RTCA	84	65.300	Vicugna_pacos
ENSPREG00000001365	rtca	99	72.404	ENSVVUG00000022041	RTCA	68	72.404	Vulpes_vulpes
ENSPREG00000001365	rtca	99	58.038	ENSXETG00000031661	RTCA	99	58.038	Xenopus_tropicalis
ENSPREG00000001365	rtca	99	86.264	ENSXCOG00000008002	rtca	100	86.264	Xiphophorus_couchianus
ENSPREG00000001365	rtca	100	97.814	ENSXMAG00000005482	rtca	100	97.814	Xiphophorus_maculatus