EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001386 (Gene tree)
Gene ID: 103460483
Gene Symbol: -
Alias: -
Full Name: gastrula zinc finger protein XlCGF52.1-like
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 3683 bases
Position: chrKK215304.1:193567-197249
Accession: 103460483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	1	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	2	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	3	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	4	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	5	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	6	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	7	8
ENSPREP00000001852	zf-C2H2	PF00096.26	2.9e-47	8	8
ENSPREP00000001852	zf-met	PF12874.7	1.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000001894	-	2337	XM_008402669	ENSPREP00000001852	498 (aa)	XP_008400891	UPI0004A3C21D

Gene Model

Click here to download ENSPREG00000001386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001386	-	88	36.782	ENSPREG00000013719	-	74	36.782
ENSPREG00000001386	-	93	46.032	ENSPREG00000020014	-	89	46.032
ENSPREG00000001386	-	90	39.474	ENSPREG00000013965	-	97	39.474
ENSPREG00000001386	-	93	38.739	ENSPREG00000013780	-	98	38.814
ENSPREG00000001386	-	92	39.333	ENSPREG00000018366	prdm5	75	39.333
ENSPREG00000001386	-	83	39.568	ENSPREG00000018985	scrt1b	55	39.568
ENSPREG00000001386	-	90	42.857	ENSPREG00000015286	-	95	39.394
ENSPREG00000001386	-	89	42.222	ENSPREG00000003483	-	89	42.222
ENSPREG00000001386	-	87	33.693	ENSPREG00000001101	znf319b	89	33.693
ENSPREG00000001386	-	86	44.221	ENSPREG00000001952	-	100	44.221
ENSPREG00000001386	-	98	42.907	ENSPREG00000014800	-	97	42.005
ENSPREG00000001386	-	97	42.437	ENSPREG00000003614	-	99	44.554
ENSPREG00000001386	-	93	39.764	ENSPREG00000013699	-	68	39.764
ENSPREG00000001386	-	97	42.466	ENSPREG00000004571	-	99	42.466
ENSPREG00000001386	-	95	40.493	ENSPREG00000011439	-	97	42.405
ENSPREG00000001386	-	87	36.842	ENSPREG00000000449	-	68	36.207
ENSPREG00000001386	-	94	34.483	ENSPREG00000007146	-	69	34.535
ENSPREG00000001386	-	85	36.441	ENSPREG00000023113	si:ch211-166g5.4	51	36.066
ENSPREG00000001386	-	88	37.500	ENSPREG00000002582	-	68	35.714
ENSPREG00000001386	-	96	36.237	ENSPREG00000016186	-	62	36.237
ENSPREG00000001386	-	86	44.545	ENSPREG00000001823	-	79	44.545
ENSPREG00000001386	-	91	35.957	ENSPREG00000003555	-	98	37.410
ENSPREG00000001386	-	88	36.552	ENSPREG00000014330	-	60	36.552
ENSPREG00000001386	-	90	36.869	ENSPREG00000016220	-	73	36.869
ENSPREG00000001386	-	86	46.903	ENSPREG00000001713	-	84	46.903
ENSPREG00000001386	-	93	36.607	ENSPREG00000019161	-	91	48.276
ENSPREG00000001386	-	87	38.988	ENSPREG00000004745	-	78	38.988
ENSPREG00000001386	-	87	48.235	ENSPREG00000004746	-	99	48.235
ENSPREG00000001386	-	90	38.050	ENSPREG00000014348	-	54	41.243
ENSPREG00000001386	-	86	36.614	ENSPREG00000009121	-	65	36.232
ENSPREG00000001386	-	96	35.476	ENSPREG00000003213	-	78	35.476
ENSPREG00000001386	-	90	40.590	ENSPREG00000003217	-	80	40.590
ENSPREG00000001386	-	99	42.342	ENSPREG00000009372	-	91	43.922
ENSPREG00000001386	-	99	33.333	ENSPREG00000005538	-	82	32.743
ENSPREG00000001386	-	87	43.885	ENSPREG00000015689	-	65	43.885
ENSPREG00000001386	-	90	34.278	ENSPREG00000007135	-	70	34.278
ENSPREG00000001386	-	95	39.384	ENSPREG00000014360	-	70	39.384
ENSPREG00000001386	-	88	34.177	ENSPREG00000016858	ZNF319	88	34.177
ENSPREG00000001386	-	85	37.828	ENSPREG00000016270	-	77	36.538
ENSPREG00000001386	-	93	52.344	ENSPREG00000001743	-	89	52.344
ENSPREG00000001386	-	89	36.685	ENSPREG00000013112	-	91	37.690
ENSPREG00000001386	-	88	34.395	ENSPREG00000015226	-	99	34.395
ENSPREG00000001386	-	91	44.326	ENSPREG00000004036	-	92	44.326
ENSPREG00000001386	-	83	30.178	ENSPREG00000017637	znf646	95	30.178
ENSPREG00000001386	-	90	45.192	ENSPREG00000021924	-	96	45.192
ENSPREG00000001386	-	86	42.667	ENSPREG00000002615	-	50	42.667
ENSPREG00000001386	-	84	40.496	ENSPREG00000009488	-	91	40.496
ENSPREG00000001386	-	95	41.284	ENSPREG00000001441	-	92	45.205
ENSPREG00000001386	-	91	36.825	ENSPREG00000006537	-	96	36.585
ENSPREG00000001386	-	89	40.870	ENSPREG00000000153	-	97	38.375
ENSPREG00000001386	-	91	43.007	ENSPREG00000015017	-	92	40.798
ENSPREG00000001386	-	96	39.130	ENSPREG00000002696	-	91	39.130
ENSPREG00000001386	-	88	42.279	ENSPREG00000015421	-	71	44.162
ENSPREG00000001386	-	86	42.273	ENSPREG00000000467	-	52	42.273
ENSPREG00000001386	-	90	37.500	ENSPREG00000000364	-	75	37.500
ENSPREG00000001386	-	85	40.936	ENSPREG00000015352	-	63	40.936
ENSPREG00000001386	-	88	35.338	ENSPREG00000016204	-	65	35.338
ENSPREG00000001386	-	93	46.121	ENSPREG00000014851	-	83	46.121
ENSPREG00000001386	-	86	36.170	ENSPREG00000008528	SNAI2	51	36.170
ENSPREG00000001386	-	87	42.857	ENSPREG00000007006	bcl6ab	52	41.139
ENSPREG00000001386	-	89	40.323	ENSPREG00000002642	-	96	40.323
ENSPREG00000001386	-	89	42.029	ENSPREG00000010437	-	89	42.029
ENSPREG00000001386	-	90	33.180	ENSPREG00000000451	-	84	33.180
ENSPREG00000001386	-	86	37.102	ENSPREG00000014105	-	93	37.102
ENSPREG00000001386	-	93	44.351	ENSPREG00000003523	-	53	44.351
ENSPREG00000001386	-	88	37.284	ENSPREG00000014340	-	75	37.284
ENSPREG00000001386	-	89	42.958	ENSPREG00000003894	-	87	39.939
ENSPREG00000001386	-	89	37.056	ENSPREG00000015247	-	76	36.962
ENSPREG00000001386	-	87	41.455	ENSPREG00000001514	zgc:113343	73	40.081
ENSPREG00000001386	-	87	43.066	ENSPREG00000000853	-	56	43.066
ENSPREG00000001386	-	88	42.857	ENSPREG00000019806	-	58	42.857
ENSPREG00000001386	-	89	40.876	ENSPREG00000015132	-	69	38.996
ENSPREG00000001386	-	90	39.888	ENSPREG00000014366	-	98	39.888
ENSPREG00000001386	-	94	40.584	ENSPREG00000017631	znf668	74	39.450
ENSPREG00000001386	-	89	42.678	ENSPREG00000004672	-	88	42.857
ENSPREG00000001386	-	91	39.322	ENSPREG00000002637	-	68	39.322
ENSPREG00000001386	-	84	30.097	ENSPREG00000001388	znf341	55	30.795
ENSPREG00000001386	-	89	43.952	ENSPREG00000012132	-	99	40.741
ENSPREG00000001386	-	91	41.088	ENSPREG00000000733	-	87	41.088
ENSPREG00000001386	-	90	39.831	ENSPREG00000004839	-	90	39.831
ENSPREG00000001386	-	87	42.651	ENSPREG00000019972	-	99	41.620
ENSPREG00000001386	-	87	39.683	ENSPREG00000010261	zbtb17	90	39.683
ENSPREG00000001386	-	97	37.658	ENSPREG00000016144	-	94	37.658
ENSPREG00000001386	-	86	40.553	ENSPREG00000006360	-	51	40.553
ENSPREG00000001386	-	91	36.882	ENSPREG00000013727	-	73	36.882
ENSPREG00000001386	-	92	40.373	ENSPREG00000013107	-	63	40.373
ENSPREG00000001386	-	87	39.777	ENSPREG00000013689	-	99	39.777
ENSPREG00000001386	-	87	42.925	ENSPREG00000002715	-	78	42.925
ENSPREG00000001386	-	88	43.716	ENSPREG00000005015	-	99	40.909
ENSPREG00000001386	-	97	42.857	ENSPREG00000002548	-	85	42.857
ENSPREG00000001386	-	99	42.478	ENSPREG00000004006	-	68	42.478
ENSPREG00000001386	-	93	38.865	ENSPREG00000015081	-	91	38.667
ENSPREG00000001386	-	90	43.363	ENSPREG00000003393	-	78	43.363
ENSPREG00000001386	-	91	35.103	ENSPREG00000014898	-	76	33.819
ENSPREG00000001386	-	99	37.028	ENSPREG00000002664	-	89	39.818
ENSPREG00000001386	-	87	38.257	ENSPREG00000021537	-	77	38.257
ENSPREG00000001386	-	91	39.004	ENSPREG00000016308	-	67	39.004
ENSPREG00000001386	-	87	44.118	ENSPREG00000017892	-	50	44.118
ENSPREG00000001386	-	90	43.541	ENSPREG00000003650	-	57	43.541
ENSPREG00000001386	-	87	38.421	ENSPREG00000020897	zbtb47b	54	38.421
ENSPREG00000001386	-	97	36.842	ENSPREG00000014127	-	87	36.740
ENSPREG00000001386	-	87	42.331	ENSPREG00000007997	GFI1	57	42.331
ENSPREG00000001386	-	89	40.625	ENSPREG00000015342	-	73	40.625
ENSPREG00000001386	-	88	38.187	ENSPREG00000014373	-	83	39.244
ENSPREG00000001386	-	89	39.483	ENSPREG00000013154	-	86	39.483
ENSPREG00000001386	-	89	44.516	ENSPREG00000011741	-	95	43.200
ENSPREG00000001386	-	91	45.370	ENSPREG00000014477	-	100	38.494
ENSPREG00000001386	-	94	42.553	ENSPREG00000005144	-	99	42.553
ENSPREG00000001386	-	87	40.777	ENSPREG00000003193	-	99	40.777
ENSPREG00000001386	-	87	34.155	ENSPREG00000019990	-	83	32.203
ENSPREG00000001386	-	86	41.566	ENSPREG00000021718	gfi1b	59	41.566
ENSPREG00000001386	-	85	37.179	ENSPREG00000016129	-	93	37.179
ENSPREG00000001386	-	86	42.169	ENSPREG00000014097	gfi1ab	52	42.169
ENSPREG00000001386	-	99	44.444	ENSPREG00000013476	-	100	41.449
ENSPREG00000001386	-	88	35.381	ENSPREG00000021246	-	94	35.381
ENSPREG00000001386	-	88	56.164	ENSPREG00000004306	-	94	56.164
ENSPREG00000001386	-	90	41.017	ENSPREG00000014945	-	99	41.017
ENSPREG00000001386	-	89	39.205	ENSPREG00000016249	-	79	39.205
ENSPREG00000001386	-	86	44.681	ENSPREG00000007431	-	58	44.681
ENSPREG00000001386	-	87	42.515	ENSPREG00000001774	-	74	42.515
ENSPREG00000001386	-	86	39.556	ENSPREG00000004725	-	86	39.556
ENSPREG00000001386	-	89	40.562	ENSPREG00000004728	-	76	40.562
ENSPREG00000001386	-	95	39.276	ENSPREG00000015254	-	87	39.276
ENSPREG00000001386	-	86	48.421	ENSPREG00000008826	-	89	48.421
ENSPREG00000001386	-	87	39.919	ENSPREG00000012539	-	68	38.558
ENSPREG00000001386	-	97	37.381	ENSPREG00000014028	-	100	46.377
ENSPREG00000001386	-	95	44.660	ENSPREG00000002603	-	68	44.660
ENSPREG00000001386	-	89	44.404	ENSPREG00000009495	-	82	44.737
ENSPREG00000001386	-	88	37.607	ENSPREG00000007875	znf384l	50	37.607
ENSPREG00000001386	-	99	39.169	ENSPREG00000002181	-	94	41.713
ENSPREG00000001386	-	86	38.360	ENSPREG00000002681	-	74	38.360

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001386	-	97	80.287	ENSAPOG00000004328	-	98	80.287	Acanthochromis_polyacanthus
ENSPREG00000001386	-	87	39.672	ENSAPOG00000013511	-	59	39.672	Acanthochromis_polyacanthus
ENSPREG00000001386	-	90	36.646	ENSACIG00000010739	-	79	36.646	Amphilophus_citrinellus
ENSPREG00000001386	-	97	79.466	ENSAOCG00000007045	-	93	79.466	Amphiprion_ocellaris
ENSPREG00000001386	-	89	35.526	ENSAPEG00000016483	-	62	38.378	Amphiprion_percula
ENSPREG00000001386	-	96	79.039	ENSAPEG00000001596	-	81	79.039	Amphiprion_percula
ENSPREG00000001386	-	100	78.529	ENSATEG00000006085	-	100	78.529	Anabas_testudineus
ENSPREG00000001386	-	89	45.545	ENSACAG00000025537	-	100	45.545	Anolis_carolinensis
ENSPREG00000001386	-	89	40.271	ENSACAG00000000082	-	98	41.429	Anolis_carolinensis
ENSPREG00000001386	-	89	39.888	ENSAMXG00000026143	-	98	39.888	Astyanax_mexicanus
ENSPREG00000001386	-	89	46.642	ENSAMXG00000035949	-	81	46.642	Astyanax_mexicanus
ENSPREG00000001386	-	90	46.032	ENSAMXG00000036257	-	98	46.032	Astyanax_mexicanus
ENSPREG00000001386	-	89	42.208	ENSAMXG00000032237	-	95	42.208	Astyanax_mexicanus
ENSPREG00000001386	-	90	48.571	ENSAMXG00000035145	-	70	48.571	Astyanax_mexicanus
ENSPREG00000001386	-	79	46.897	ENSAMXG00000033013	-	84	46.897	Astyanax_mexicanus
ENSPREG00000001386	-	90	46.288	ENSAMXG00000012873	-	97	46.288	Astyanax_mexicanus
ENSPREG00000001386	-	88	35.556	ENSAMXG00000017199	-	50	34.375	Astyanax_mexicanus
ENSPREG00000001386	-	100	83.202	ENSCVAG00000011235	-	100	83.399	Cyprinodon_variegatus
ENSPREG00000001386	-	90	41.438	ENSELUG00000013357	-	83	39.628	Esox_lucius
ENSPREG00000001386	-	90	36.991	ENSELUG00000013844	-	90	33.333	Esox_lucius
ENSPREG00000001386	-	90	35.514	ENSELUG00000021287	-	79	41.270	Esox_lucius
ENSPREG00000001386	-	89	37.469	ENSFHEG00000019915	-	75	37.469	Fundulus_heteroclitus
ENSPREG00000001386	-	89	41.991	ENSGMOG00000003238	-	100	41.631	Gadus_morhua
ENSPREG00000001386	-	89	37.726	ENSGAFG00000003150	-	75	46.154	Gambusia_affinis
ENSPREG00000001386	-	100	96.586	ENSGAFG00000012977	-	100	96.586	Gambusia_affinis
ENSPREG00000001386	-	89	46.766	ENSIPUG00000021556	-	93	46.766	Ictalurus_punctatus
ENSPREG00000001386	-	92	39.098	ENSIPUG00000006916	-	83	39.903	Ictalurus_punctatus
ENSPREG00000001386	-	93	44.811	ENSIPUG00000004428	-	81	44.811	Ictalurus_punctatus
ENSPREG00000001386	-	100	77.886	ENSKMAG00000004988	-	100	77.886	Kryptolebias_marmoratus
ENSPREG00000001386	-	88	43.590	ENSLOCG00000014366	-	94	43.590	Lepisosteus_oculatus
ENSPREG00000001386	-	90	39.423	ENSLOCG00000014144	-	100	37.647	Lepisosteus_oculatus
ENSPREG00000001386	-	91	38.806	ENSMAMG00000016542	-	60	38.806	Mastacembelus_armatus
ENSPREG00000001386	-	100	79.125	ENSMAMG00000019301	-	100	79.125	Mastacembelus_armatus
ENSPREG00000001386	-	94	38.298	ENSMMOG00000009852	-	86	38.298	Mola_mola
ENSPREG00000001386	-	96	43.725	ENSMALG00000005554	-	96	40.889	Monopterus_albus
ENSPREG00000001386	-	90	45.038	ENSOCUG00000005876	-	100	45.000	Oryctolagus_cuniculus
ENSPREG00000001386	-	91	39.386	ENSPKIG00000006616	-	60	39.386	Paramormyrops_kingsleyae
ENSPREG00000001386	-	87	36.010	ENSPMGG00000017633	-	91	36.010	Periophthalmus_magnuspinnatus
ENSPREG00000001386	-	100	98.996	ENSPFOG00000010682	-	100	98.996	Poecilia_formosa
ENSPREG00000001386	-	87	38.781	ENSPLAG00000002892	-	69	38.781	Poecilia_latipinna
ENSPREG00000001386	-	100	98.795	ENSPMEG00000001399	-	100	98.795	Poecilia_mexicana
ENSPREG00000001386	-	89	43.161	ENSPNAG00000000219	-	88	43.161	Pygocentrus_nattereri
ENSPREG00000001386	-	90	47.368	ENSPNAG00000015116	-	78	47.368	Pygocentrus_nattereri
ENSPREG00000001386	-	90	39.273	ENSPNAG00000025570	-	82	39.273	Pygocentrus_nattereri
ENSPREG00000001386	-	89	41.818	ENSSFOG00015006108	-	59	41.818	Scleropages_formosus
ENSPREG00000001386	-	99	43.787	ENSSMAG00000009115	-	84	51.786	Scophthalmus_maximus
ENSPREG00000001386	-	79	51.613	ENSSDUG00000002195	-	86	51.613	Seriola_dumerili
ENSPREG00000001386	-	100	79.523	ENSSDUG00000006463	-	100	79.523	Seriola_dumerili
ENSPREG00000001386	-	91	40.615	ENSSLDG00000020727	-	97	40.615	Seriola_lalandi_dorsalis
ENSPREG00000001386	-	100	78.926	ENSSLDG00000006724	-	100	74.854	Seriola_lalandi_dorsalis
ENSPREG00000001386	-	87	49.524	ENSSPAG00000021008	-	92	45.318	Stegastes_partitus
ENSPREG00000001386	-	88	38.647	ENSSPAG00000012960	-	82	35.659	Stegastes_partitus
ENSPREG00000001386	-	90	41.107	ENSTRUG00000005321	-	97	39.925	Takifugu_rubripes
ENSPREG00000001386	-	91	38.870	ENSTRUG00000021675	-	93	34.921	Takifugu_rubripes
ENSPREG00000001386	-	92	40.467	ENSTNIG00000008200	-	100	40.467	Tetraodon_nigroviridis
ENSPREG00000001386	-	89	46.396	ENSTNIG00000000320	-	100	46.396	Tetraodon_nigroviridis
ENSPREG00000001386	-	90	41.694	ENSXETG00000006575	znf420	81	41.694	Xenopus_tropicalis
ENSPREG00000001386	-	90	40.070	ENSXCOG00000009665	-	92	46.591	Xiphophorus_couchianus
ENSPREG00000001386	-	100	98.394	ENSXMAG00000028625	-	100	98.394	Xiphophorus_maculatus