EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001414 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 19780 bases
Position: chrLG2:13009753-13029532
Accession: 103478240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000002018	TUDOR	PF00567.24	1.6e-77	1	5
ENSPREP00000002018	TUDOR	PF00567.24	1.6e-77	2	5
ENSPREP00000002018	TUDOR	PF00567.24	1.6e-77	3	5
ENSPREP00000002018	TUDOR	PF00567.24	1.6e-77	4	5
ENSPREP00000002018	TUDOR	PF00567.24	1.6e-77	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002063	-	3933	XM_008431910	ENSPREP00000002018	1310 (aa)	XP_008430132	-

Gene Model

Click here to download ENSPREG00000001414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001414's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001414	rnf17	64	39.474	ENSPREG00000018829	tdrd6	52	39.474

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001414	rnf17	81	44.928	ENSG00000132972	RNF17	92	50.000	Homo_sapiens
ENSPREG00000001414	rnf17	79	64.286	ENSAPOG00000017034	rnf17	78	64.286	Acanthochromis_polyacanthus
ENSPREG00000001414	rnf17	80	43.478	ENSAMEG00000017340	RNF17	78	43.478	Ailuropoda_melanoleuca
ENSPREG00000001414	rnf17	91	65.079	ENSAOCG00000018283	rnf17	81	65.079	Amphiprion_ocellaris
ENSPREG00000001414	rnf17	95	64.265	ENSAPEG00000022338	rnf17	97	65.588	Amphiprion_percula
ENSPREG00000001414	rnf17	83	61.874	ENSATEG00000002067	rnf17	84	61.610	Anabas_testudineus
ENSPREG00000001414	rnf17	83	41.304	ENSAPLG00000003969	RNF17	79	41.304	Anas_platyrhynchos
ENSPREG00000001414	rnf17	83	32.341	ENSACAG00000001418	RNF17	74	32.057	Anolis_carolinensis
ENSPREG00000001414	rnf17	72	45.263	ENSANAG00000029969	RNF17	66	45.263	Aotus_nancymaae
ENSPREG00000001414	rnf17	92	69.841	ENSACLG00000018279	rnf17	81	69.841	Astatotilapia_calliptera
ENSPREG00000001414	rnf17	82	47.784	ENSAMXG00000011002	rnf17	83	46.602	Astyanax_mexicanus
ENSPREG00000001414	rnf17	82	33.142	ENSCJAG00000018937	RNF17	98	34.309	Callithrix_jacchus
ENSPREG00000001414	rnf17	77	47.959	ENSCAFG00000007418	RNF17	77	47.959	Canis_familiaris
ENSPREG00000001414	rnf17	81	42.754	ENSCHIG00000026716	RNF17	98	36.765	Capra_hircus
ENSPREG00000001414	rnf17	81	44.203	ENSTSYG00000000365	RNF17	78	44.203	Carlito_syrichta
ENSPREG00000001414	rnf17	81	44.928	ENSCCAG00000026725	RNF17	78	44.928	Cebus_capucinus
ENSPREG00000001414	rnf17	81	44.203	ENSCATG00000040352	RNF17	78	44.203	Cercocebus_atys
ENSPREG00000001414	rnf17	81	44.203	ENSCLAG00000004127	RNF17	73	32.535	Chinchilla_lanigera
ENSPREG00000001414	rnf17	77	44.203	ENSCSAG00000018019	RNF17	75	44.203	Chlorocebus_sabaeus
ENSPREG00000001414	rnf17	83	34.215	ENSCPBG00000020920	RNF17	77	34.117	Chrysemys_picta_bellii
ENSPREG00000001414	rnf17	81	44.203	ENSCANG00000032927	RNF17	78	44.203	Colobus_angolensis_palliatus
ENSPREG00000001414	rnf17	82	43.478	ENSCGRG00001022658	Rnf17	67	43.478	Cricetulus_griseus_chok1gshd
ENSPREG00000001414	rnf17	82	43.478	ENSCGRG00000009924	Rnf17	67	43.478	Cricetulus_griseus_crigri
ENSPREG00000001414	rnf17	93	57.298	ENSCSEG00000008626	rnf17	85	56.856	Cynoglossus_semilaevis
ENSPREG00000001414	rnf17	87	56.957	ENSCVAG00000017008	rnf17	95	57.377	Cyprinodon_variegatus
ENSPREG00000001414	rnf17	87	46.667	ENSDARG00000056387	rnf17	78	46.275	Danio_rerio
ENSPREG00000001414	rnf17	82	43.478	ENSDNOG00000006115	RNF17	68	43.478	Dasypus_novemcinctus
ENSPREG00000001414	rnf17	83	44.203	ENSECAG00000017152	RNF17	68	44.203	Equus_caballus
ENSPREG00000001414	rnf17	64	32.900	ENSEEUG00000000332	RNF17	60	32.143	Erinaceus_europaeus
ENSPREG00000001414	rnf17	91	53.846	ENSELUG00000005626	rnf17	80	53.846	Esox_lucius
ENSPREG00000001414	rnf17	80	43.478	ENSFCAG00000004914	RNF17	78	43.478	Felis_catus
ENSPREG00000001414	rnf17	82	33.389	ENSFALG00000008766	RNF17	78	33.192	Ficedula_albicollis
ENSPREG00000001414	rnf17	82	40.580	ENSFDAG00000017857	RNF17	72	31.457	Fukomys_damarensis
ENSPREG00000001414	rnf17	92	74.603	ENSFHEG00000014822	rnf17	83	69.013	Fundulus_heteroclitus
ENSPREG00000001414	rnf17	51	36.364	ENSGALG00000045414	-	98	36.364	Gallus_gallus
ENSPREG00000001414	rnf17	94	78.203	ENSGAFG00000004463	rnf17	96	86.667	Gambusia_affinis
ENSPREG00000001414	rnf17	62	60.266	ENSGACG00000001340	-	100	60.266	Gasterosteus_aculeatus
ENSPREG00000001414	rnf17	72	34.402	ENSGAGG00000016999	RNF17	65	33.962	Gopherus_agassizii
ENSPREG00000001414	rnf17	81	44.928	ENSGGOG00000014491	RNF17	78	44.928	Gorilla_gorilla
ENSPREG00000001414	rnf17	92	69.841	ENSHBUG00000003554	rnf17	81	69.841	Haplochromis_burtoni
ENSPREG00000001414	rnf17	82	44.203	ENSHGLG00000007270	RNF17	68	44.203	Heterocephalus_glaber_female
ENSPREG00000001414	rnf17	82	44.203	ENSHGLG00100017393	RNF17	69	44.203	Heterocephalus_glaber_male
ENSPREG00000001414	rnf17	94	47.987	ENSHCOG00000017676	rnf17	90	52.101	Hippocampus_comes
ENSPREG00000001414	rnf17	82	48.522	ENSIPUG00000001087	rnf17	79	48.376	Ictalurus_punctatus
ENSPREG00000001414	rnf17	83	32.063	ENSJJAG00000016584	Rnf17	72	31.920	Jaculus_jaculus
ENSPREG00000001414	rnf17	94	71.429	ENSKMAG00000013403	rnf17	82	71.429	Kryptolebias_marmoratus
ENSPREG00000001414	rnf17	81	63.298	ENSLBEG00000014910	rnf17	77	62.909	Labrus_bergylta
ENSPREG00000001414	rnf17	76	36.452	ENSLACG00000000323	RNF17	80	35.861	Latimeria_chalumnae
ENSPREG00000001414	rnf17	86	44.395	ENSLOCG00000010768	rnf17	70	43.602	Lepisosteus_oculatus
ENSPREG00000001414	rnf17	81	44.928	ENSMFAG00000032388	RNF17	78	44.928	Macaca_fascicularis
ENSPREG00000001414	rnf17	82	44.928	ENSMMUG00000014610	RNF17	78	44.928	Macaca_mulatta
ENSPREG00000001414	rnf17	82	44.928	ENSMNEG00000011234	RNF17	98	32.457	Macaca_nemestrina
ENSPREG00000001414	rnf17	81	44.203	ENSMLEG00000030227	RNF17	70	44.203	Mandrillus_leucophaeus
ENSPREG00000001414	rnf17	94	58.108	ENSMAMG00000020403	rnf17	95	58.108	Mastacembelus_armatus
ENSPREG00000001414	rnf17	94	69.841	ENSMZEG00005019166	rnf17	83	69.841	Maylandia_zebra
ENSPREG00000001414	rnf17	82	31.894	ENSMGAG00000015138	RNF17	95	31.124	Meleagris_gallopavo
ENSPREG00000001414	rnf17	78	42.754	ENSMAUG00000004788	Rnf17	67	42.754	Mesocricetus_auratus
ENSPREG00000001414	rnf17	81	42.754	ENSMICG00000010364	RNF17	98	32.848	Microcebus_murinus
ENSPREG00000001414	rnf17	57	42.754	ENSMOCG00000011818	-	99	38.235	Microtus_ochrogaster
ENSPREG00000001414	rnf17	94	56.638	ENSMMOG00000019514	rnf17	96	57.423	Mola_mola
ENSPREG00000001414	rnf17	80	45.652	ENSMODG00000007827	RNF17	71	33.444	Monodelphis_domestica
ENSPREG00000001414	rnf17	81	56.772	ENSMALG00000016943	rnf17	79	56.415	Monopterus_albus
ENSPREG00000001414	rnf17	83	32.437	MGP_CAROLIEiJ_G0019337	Rnf17	73	32.428	Mus_caroli
ENSPREG00000001414	rnf17	83	32.490	ENSMUSG00000000365	Rnf17	73	32.481	Mus_musculus
ENSPREG00000001414	rnf17	78	42.754	MGP_PahariEiJ_G0030355	Rnf17	73	42.754	Mus_pahari
ENSPREG00000001414	rnf17	83	32.518	MGP_SPRETEiJ_G0020228	Rnf17	73	32.510	Mus_spretus
ENSPREG00000001414	rnf17	80	43.478	ENSMPUG00000013305	RNF17	74	43.478	Mustela_putorius_furo
ENSPREG00000001414	rnf17	80	44.928	ENSMLUG00000003903	RNF17	68	44.928	Myotis_lucifugus
ENSPREG00000001414	rnf17	78	42.029	ENSNGAG00000013553	Rnf17	65	42.029	Nannospalax_galili
ENSPREG00000001414	rnf17	94	57.887	ENSNBRG00000012006	rnf17	91	69.231	Neolamprologus_brichardi
ENSPREG00000001414	rnf17	82	44.928	ENSNLEG00000013780	RNF17	79	44.928	Nomascus_leucogenys
ENSPREG00000001414	rnf17	92	72.131	ENSONIG00000015746	rnf17	99	61.064	Oreochromis_niloticus
ENSPREG00000001414	rnf17	82	44.203	ENSOCUG00000007384	RNF17	73	44.203	Oryctolagus_cuniculus
ENSPREG00000001414	rnf17	87	60.317	ENSORLG00000012818	rnf17	89	60.317	Oryzias_latipes
ENSPREG00000001414	rnf17	91	63.158	ENSORLG00020009879	-	82	63.158	Oryzias_latipes_hni
ENSPREG00000001414	rnf17	91	61.404	ENSORLG00015013027	-	82	61.404	Oryzias_latipes_hsok
ENSPREG00000001414	rnf17	80	52.239	ENSOMEG00000009891	rnf17	92	51.737	Oryzias_melastigma
ENSPREG00000001414	rnf17	82	31.859	ENSOGAG00000014803	RNF17	73	31.631	Otolemur_garnettii
ENSPREG00000001414	rnf17	81	42.754	ENSOARG00000014641	RNF17	73	42.754	Ovis_aries
ENSPREG00000001414	rnf17	82	32.408	ENSPPAG00000028779	RNF17	98	33.601	Pan_paniscus
ENSPREG00000001414	rnf17	80	43.478	ENSPPRG00000009230	RNF17	78	43.478	Panthera_pardus
ENSPREG00000001414	rnf17	80	43.478	ENSPTIG00000001738	RNF17	78	43.478	Panthera_tigris_altaica
ENSPREG00000001414	rnf17	82	32.408	ENSPTRG00000005713	RNF17	98	33.441	Pan_troglodytes
ENSPREG00000001414	rnf17	82	44.203	ENSPANG00000007640	RNF17	78	44.203	Papio_anubis
ENSPREG00000001414	rnf17	82	43.959	ENSPKIG00000001648	rnf17	89	43.745	Paramormyrops_kingsleyae
ENSPREG00000001414	rnf17	82	34.016	ENSPSIG00000011245	RNF17	99	33.746	Pelodiscus_sinensis
ENSPREG00000001414	rnf17	83	32.710	ENSPEMG00000008693	Rnf17	72	32.672	Peromyscus_maniculatus_bairdii
ENSPREG00000001414	rnf17	77	35.099	ENSPCIG00000009190	-	92	35.144	Phascolarctos_cinereus
ENSPREG00000001414	rnf17	91	98.333	ENSPFOG00000007124	rnf17	81	98.333	Poecilia_formosa
ENSPREG00000001414	rnf17	91	96.667	ENSPLAG00000006198	rnf17	81	96.667	Poecilia_latipinna
ENSPREG00000001414	rnf17	91	98.333	ENSPMEG00000022432	rnf17	81	98.333	Poecilia_mexicana
ENSPREG00000001414	rnf17	81	44.928	ENSPPYG00000005215	RNF17	70	44.928	Pongo_abelii
ENSPREG00000001414	rnf17	67	30.986	ENSPCOG00000020211	RNF17	75	30.986	Propithecus_coquereli
ENSPREG00000001414	rnf17	81	44.203	ENSPVAG00000013021	RNF17	71	44.203	Pteropus_vampyrus
ENSPREG00000001414	rnf17	86	48.895	ENSPNAG00000027505	rnf17	84	50.572	Pygocentrus_nattereri
ENSPREG00000001414	rnf17	78	42.754	ENSRNOG00000008059	Rnf17	65	42.754	Rattus_norvegicus
ENSPREG00000001414	rnf17	76	44.203	ENSRBIG00000027010	RNF17	79	31.973	Rhinopithecus_bieti
ENSPREG00000001414	rnf17	82	44.203	ENSRROG00000022801	RNF17	78	44.203	Rhinopithecus_roxellana
ENSPREG00000001414	rnf17	81	45.652	ENSSBOG00000021661	RNF17	78	45.652	Saimiri_boliviensis_boliviensis
ENSPREG00000001414	rnf17	80	45.652	ENSSHAG00000005609	RNF17	68	45.652	Sarcophilus_harrisii
ENSPREG00000001414	rnf17	85	45.808	ENSSFOG00015023037	rnf17	88	46.373	Scleropages_formosus
ENSPREG00000001414	rnf17	80	59.649	ENSSMAG00000007429	rnf17	78	59.649	Scophthalmus_maximus
ENSPREG00000001414	rnf17	79	66.667	ENSSDUG00000013530	rnf17	80	66.667	Seriola_dumerili
ENSPREG00000001414	rnf17	80	68.421	ENSSLDG00000019577	rnf17	78	68.421	Seriola_lalandi_dorsalis
ENSPREG00000001414	rnf17	74	44.203	ENSSARG00000003016	RNF17	57	44.203	Sorex_araneus
ENSPREG00000001414	rnf17	80	36.511	ENSSPUG00000008917	RNF17	79	36.364	Sphenodon_punctatus
ENSPREG00000001414	rnf17	78	62.430	ENSSPAG00000001925	rnf17	79	62.917	Stegastes_partitus
ENSPREG00000001414	rnf17	82	42.754	ENSSSCG00000009572	RNF17	82	42.754	Sus_scrofa
ENSPREG00000001414	rnf17	63	31.905	ENSTGUG00000011272	-	99	31.905	Taeniopygia_guttata
ENSPREG00000001414	rnf17	63	34.241	ENSTGUG00000011267	-	99	33.719	Taeniopygia_guttata
ENSPREG00000001414	rnf17	88	50.000	ENSTRUG00000015498	rnf17	82	49.618	Takifugu_rubripes
ENSPREG00000001414	rnf17	82	50.087	ENSTNIG00000015681	rnf17	99	50.000	Tetraodon_nigroviridis
ENSPREG00000001414	rnf17	64	43.478	ENSTBEG00000000282	RNF17	55	43.478	Tupaia_belangeri
ENSPREG00000001414	rnf17	77	44.203	ENSTTRG00000012698	RNF17	70	44.203	Tursiops_truncatus
ENSPREG00000001414	rnf17	80	43.478	ENSVVUG00000006226	RNF17	74	43.478	Vulpes_vulpes
ENSPREG00000001414	rnf17	80	89.474	ENSXCOG00000018295	rnf17	81	89.474	Xiphophorus_couchianus
ENSPREG00000001414	rnf17	79	89.474	ENSXMAG00000014747	rnf17	80	89.474	Xiphophorus_maculatus