EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPREG00000001449 (Gene tree)
Gene ID: 103474671
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Poecilia_reticulata
Status: putative
Strand: Minus strand
Length: 2909 bases
Position: chrLG13:18242345-18245253
Accession: 103474671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPREP00000001980	MMR_HSR1	PF01926.23	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPRET00000002024	-	905	XM_017308392	ENSPREP00000001980	258 (aa)	XP_017163881	UPI0007EAA4ED

Gene Model

Click here to download ENSPREG00000001449's gene model file

Pathways

Pathway ID	Pathway Name	Source
pret03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPREG00000001449's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPREG00000001449	srprb	66	31.579	ENSPREG00000009009	-	88	31.579
ENSPREG00000001449	srprb	66	30.994	ENSPREG00000007723	-	88	30.994
ENSPREG00000001449	srprb	73	30.851	ENSPREG00000012688	arf3b	96	30.851
ENSPREG00000001449	srprb	62	31.875	ENSPREG00000008632	arf2b	83	31.875
ENSPREG00000001449	srprb	73	30.851	ENSPREG00000020988	-	96	30.851

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPREG00000001449	srprb	100	87.984	ENSAPOG00000021219	srprb	93	87.984	Acanthochromis_polyacanthus
ENSPREG00000001449	srprb	99	87.059	ENSACIG00000014621	srprb	96	87.059	Amphilophus_citrinellus
ENSPREG00000001449	srprb	100	86.434	ENSAOCG00000017265	srprb	93	86.434	Amphiprion_ocellaris
ENSPREG00000001449	srprb	100	86.434	ENSAPEG00000024541	srprb	82	86.434	Amphiprion_percula
ENSPREG00000001449	srprb	99	86.275	ENSATEG00000014016	srprb	93	86.275	Anabas_testudineus
ENSPREG00000001449	srprb	100	86.873	ENSACLG00000016748	srprb	94	86.873	Astatotilapia_calliptera
ENSPREG00000001449	srprb	100	69.767	ENSAMXG00000044118	srprb	95	71.032	Astyanax_mexicanus
ENSPREG00000001449	srprb	100	82.171	ENSCSEG00000017194	srprb	94	82.171	Cynoglossus_semilaevis
ENSPREG00000001449	srprb	100	89.922	ENSCVAG00000004221	srprb	97	89.922	Cyprinodon_variegatus
ENSPREG00000001449	srprb	100	67.829	ENSDARG00000030949	srprb	97	67.829	Danio_rerio
ENSPREG00000001449	srprb	97	80.800	ENSELUG00000009740	srprb	92	80.800	Esox_lucius
ENSPREG00000001449	srprb	100	91.473	ENSFHEG00000006004	srprb	97	91.473	Fundulus_heteroclitus
ENSPREG00000001449	srprb	98	83.399	ENSGMOG00000002081	srprb	94	83.399	Gadus_morhua
ENSPREG00000001449	srprb	100	96.124	ENSGAFG00000012593	srprb	97	96.124	Gambusia_affinis
ENSPREG00000001449	srprb	100	85.271	ENSGACG00000009891	srprb	95	85.271	Gasterosteus_aculeatus
ENSPREG00000001449	srprb	100	86.873	ENSHBUG00000002145	srprb	94	86.873	Haplochromis_burtoni
ENSPREG00000001449	srprb	98	83.399	ENSHCOG00000007732	srprb	95	83.399	Hippocampus_comes
ENSPREG00000001449	srprb	98	66.667	ENSIPUG00000004177	srprb	94	66.667	Ictalurus_punctatus
ENSPREG00000001449	srprb	100	85.659	ENSKMAG00000020736	srprb	97	85.659	Kryptolebias_marmoratus
ENSPREG00000001449	srprb	99	86.719	ENSLBEG00000021483	srprb	93	86.719	Labrus_bergylta
ENSPREG00000001449	srprb	100	69.884	ENSLOCG00000009740	srprb	87	68.340	Lepisosteus_oculatus
ENSPREG00000001449	srprb	100	87.597	ENSMAMG00000011876	srprb	94	87.597	Mastacembelus_armatus
ENSPREG00000001449	srprb	100	86.100	ENSMZEG00005016621	srprb	100	86.100	Maylandia_zebra
ENSPREG00000001449	srprb	100	86.434	ENSMMOG00000012550	srprb	95	86.434	Mola_mola
ENSPREG00000001449	srprb	100	85.659	ENSMALG00000012595	srprb	94	85.659	Monopterus_albus
ENSPREG00000001449	srprb	73	86.243	ENSNBRG00000004699	srprb	88	79.904	Neolamprologus_brichardi
ENSPREG00000001449	srprb	100	86.822	ENSONIG00000003788	srprb	77	86.822	Oreochromis_niloticus
ENSPREG00000001449	srprb	100	80.233	ENSORLG00000006430	srprb	94	80.233	Oryzias_latipes
ENSPREG00000001449	srprb	100	80.620	ENSORLG00020003413	srprb	94	80.620	Oryzias_latipes_hni
ENSPREG00000001449	srprb	100	80.620	ENSORLG00015000166	srprb	94	80.620	Oryzias_latipes_hsok
ENSPREG00000001449	srprb	100	82.171	ENSOMEG00000012735	srprb	94	82.171	Oryzias_melastigma
ENSPREG00000001449	srprb	97	69.841	ENSPKIG00000013147	srprb	95	69.841	Paramormyrops_kingsleyae
ENSPREG00000001449	srprb	98	81.028	ENSPMGG00000014061	srprb	92	81.028	Periophthalmus_magnuspinnatus
ENSPREG00000001449	srprb	100	97.674	ENSPFOG00000011347	srprb	93	97.674	Poecilia_formosa
ENSPREG00000001449	srprb	100	97.674	ENSPLAG00000001156	srprb	100	97.674	Poecilia_latipinna
ENSPREG00000001449	srprb	100	98.062	ENSPMEG00000012169	srprb	100	98.062	Poecilia_mexicana
ENSPREG00000001449	srprb	100	86.873	ENSPNYG00000005911	srprb	94	86.873	Pundamilia_nyererei
ENSPREG00000001449	srprb	93	73.750	ENSPNAG00000009983	srprb	91	73.750	Pygocentrus_nattereri
ENSPREG00000001449	srprb	98	73.228	ENSSFOG00015019355	srprb	95	73.228	Scleropages_formosus
ENSPREG00000001449	srprb	100	85.271	ENSSMAG00000013202	srprb	94	85.271	Scophthalmus_maximus
ENSPREG00000001449	srprb	100	86.822	ENSSDUG00000018746	srprb	88	86.822	Seriola_dumerili
ENSPREG00000001449	srprb	100	87.209	ENSSLDG00000020560	srprb	94	87.209	Seriola_lalandi_dorsalis
ENSPREG00000001449	srprb	100	87.209	ENSSPAG00000008898	srprb	93	87.209	Stegastes_partitus
ENSPREG00000001449	srprb	100	84.109	ENSTRUG00000022463	srprb	94	84.109	Takifugu_rubripes
ENSPREG00000001449	srprb	99	81.641	ENSTNIG00000007725	srprb	98	81.641	Tetraodon_nigroviridis
ENSPREG00000001449	srprb	100	96.124	ENSXCOG00000012585	srprb	100	96.124	Xiphophorus_couchianus
ENSPREG00000001449	srprb	100	95.736	ENSXMAG00000028725	srprb	100	95.736	Xiphophorus_maculatus